Gadus morhua (Atlantic cod): 115547551
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Entry
115547551 CDS
T10832
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115547551
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115547551
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
DehI
Motif
Other DBs
NCBI-GeneID:
115547551
NCBI-ProteinID:
XP_030217719
Ensembl:
ENSGMOG00000018510
LinkDB
All DBs
Position
7:12175685..12184678
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AA seq
1061 aa
AA seq
DB search
MENLTPEQWREIVNKKMKFPPALITAIQEGKVETVSGLLNTGDGIIRQLDESEDRLWREA
LNLSIRLGNEGVMDALIHGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
HSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYEIVSMLTQKGHEIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSEDAMLTAFGLSKELRKLSKKEPEFKPQYL
ALEELCQEFAVELLGMCRNQSEVTTILNSAGEDRSDPQDEQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLLVSITIFVTMPLLCLIYWIAPKSKLG
KTLKIPVIKFLLHSASYLWFLITLLGESITMELYRDVFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNVLDVMVLSMYLASFALRVLIMLKGHFHCMDLSGSADCVYF
TQTVRDQWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAQESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGLNNIYVPYVISPRLGKFNETFRFLFWTMFGVANQDYVDMPDYVVAEL
VGRVLYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKATFYLIRAIFRRICCCCNLSSEKEYPPLDPMYPPMQSNEKGSEDSQISYRQ
QVIRALVQRYIESARREFEETKRKDVGNRISALSKVMGRLHSEMKVVQQLLAKEGFSGKE
GAPQEGSSILGKYILGAKNNFKGFNKDQTERALPVTVHHGLEEEAAHLGQGGEAAPRTPA
PEESAERGAGGGLEGGLERAVAAVAACVVINMEEGRAPGPTEDERGETADGTEPAADAEN
TASTTTGEVTPEDTSGPSAGQKAAGEAAAVAVGGGEAQEERWSEVLKKEDGKTERKSERG
TDQNGSTVGEKPSEEKVDASEAKVTGARTDAEGKGEQAQPKGGEETKQKADGAKKTVVWE
DSGKPGKVKVVPSPTGSSSSQDTGFGSQEGDRPMDGVAGRR
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccggagcaatggcgggagatcgtgaacaagaagatgaagttcccg
ccggcgctcatcacggccatccaggaggggaaggtggagacggtgagcggcctgctgaac
accggcgacggcatcatccggcagctggacgagtcggaggaccgtctgtggcgcgaggcc
ctcaacctgtccatccgcctgggcaacgagggcgtgatggacgccctcatccacggggtc
aagttcgacttccggcagatccacgaggcgctgctggtcgccgtggacaccaaccagccc
cgcgtggtcaagcggctgctggaccgcctggaccaggagaagggcaacaagatggacgtg
cactccttctcccaggccatcttcgaccactccatcgacaactcgcagttcgccccgggc
gtgacgccgctgaccctggcctgccagaaagacctgtacgagatcgtcagcatgctgacg
cagaagggccacgagatcccctggccgcacaagatctcctgcgcctgtctggagtgccgc
aacggccggcagtacgacctgctcaagttctccctgtcgcgcatcaacacgtaccgcggc
atcgccagccgcgcctacctgtccgtcacctcggaggacgccatgctcaccgccttcggc
ctcagcaaggagctccgcaagctgtccaagaaggagcccgagttcaagccgcagtacctg
gcgctggaggagctgtgtcaggagtttgcggtggagctgctgggaatgtgtcgcaaccag
agcgaggtcaccaccatcctcaacagcgccggggaggaccgctcggacccccaggacgag
caggccttcgaggaggggatccccaacctctcccgcctgcggctggccgtcaactacaac
cagaaacagtttgtggcccaccccatctgccagcaggtgctgtcctccatctggtgtggt
aacctggccggctggcgggggagtcgcaccgcctggaagctgctggtctccatcaccatc
ttcgtcaccatgcccttactctgcctcatctactggatcgctccaaagtcaaagttgggc
aagacactgaagatcccggtcatcaagttcctgctgcactcggcctcctacctgtggttc
ctgatcacgctgctgggggagtccatcaccatggagctgtaccgggacgtgttcgcttcc
cgccagcagaacatcctgcacagctccttccacatggtgtgggtcgtagggttcttctgg
tacgagtgcaaagaggtgtggatcgaggggctgcgcagctacttcctggactggtggaac
gttctggacgtgatggtgctcagcatgtacctggcctccttcgccctcagggtgctcatc
atgctcaagggacacttccactgcatggacctcagcggcagcgccgactgcgtgtacttc
acccagaccgtgcgggaccagtggcaccaggaggacccccagctaatcgcggaggtcctg
tttgcggtgaccagcatgctgagcttcacgcggctggcctacatcctcccggcccaggag
tccctggggacgctgcagatctccatcggcaagatgatcgacgacatgatgaggttcatg
ttcattctgatgatcatcgggacagcgttcctctgcggtctgaacaatatctacgttcct
tacgtcatctcaccgcgcctcggcaagtttaacgagacctttcgcttcctgttctggacc
atgttcggggtggccaaccaggactatgtggacatgccggactatgtggtggccgagctg
gtgggcagggttctctacggcatcttcaccctcgtcatcgtcatcgtcctcctgaacatg
cttatcgctatgatcaccaactccttccagaagatagaggacgatgcagacgtggagtgg
aagtttgcccggtccaagctgtacctcagctacttcagggaggggctcaccatgcccgtg
ccctttaacatcatcccctccccgaaggccaccttctacctcatcagggccatcttcagg
cggatctgctgctgttgtaacttaagctctgagaaagaatatccccctttagacccgatg
tatccccctatgcagtccaacgagaagggctctgaggacagtcagatctcctaccgacag
caggtgatccgggctctggtgcagcgctacatcgagtcggcccgcagggagtttgaggag
accaagaggaaagacgtcgggaaccgcatctcggcgctgagcaaagtgatgggccggctg
cacagcgagatgaaagtggtgcagcagctgctggcgaaggaggggttcagcggcaaggag
ggcgccccccaggagggctcctccatcctggggaaatacatcctgggggccaagaacaac
tttaaaggcttcaacaaggaccagacggagagagccctccctgtgacggtgcaccacggg
ctggaggaggaggccgcgcacctggggcaggggggggaggcggcgccgcggacccccgcg
ccagaggagagcgccgagaggggggcagggggcggactggagggggggctcgagagggcg
gtggcggcggtggcggcctgtgtcgtcattaacatggaggaaggtcgcgctccgggcccg
acggaggacgagagaggggagacggccgacgggacggagccggcggccgacgccgagaac
acggccagcacaaccaccggggaggtgaccccggaggacacgagtggaccgtcagcgggt
cagaaggccgcaggcgaggctgcggctgtggcagtgggggggggggaggcccaggaggaa
agatggagcgaggtcttgaaaaaggaggatgggaagacggagagaaagagtgaacgaggt
acggaccagaacggcagtacggtgggagaaaagcccagcgaggagaaggtggacgcgtcg
gaggctaaggtgaccggcgcaaggaccgatgcggaagggaagggggagcaggcgcagccc
aaggggggggaggagacgaaacagaaggcggacggagccaagaagacagtcgtgtgggag
gactctgggaaacccgggaaggtgaaggtggtcccctctccgacaggaagcagcagctct
caggacactggcttcggttcacaggagggagacaggcctatggacggcgtggcaggacga
cgctag
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integrated database retrieval system
