KEGG   Gadus morhua (Atlantic cod): 115547671
Entry
115547671         CDS       T10832                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like
  KO
K12842  U2-associated protein SR140
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115547671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmh03041]
    115547671
Spliceosome [BR:gmh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115547671
 Complex B
    115547671
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID
Other DBs
NCBI-GeneID: 115547671
NCBI-ProteinID: XP_030217930
Ensembl: ENSGMOG00000000935
LinkDB
Position
7:14497638..14509930
AA seq 888 aa
MAERKGKPASAIKSLSKREQEELKKKEQEKAAEVFEEFLASFEGSTKSGVKTFVRGGIVN
VTKEEEAADVSRNKLYRPAAKFNSTPPPVSLAHSPDAKKPIFKKKVEGKKRSNLELFKEE
LKLIQEEREERHKRKKNDPGGGGGGGGAYGDLDTPLSRRSSFYDDTVLPITTNLYISCIS
PKMNEEMLCKEFGKYGPLASVKIMWPRTDEERCRTTNRAFVAYMTRRDAERALASLDGKT
VMGFEMKLGWGKPARIPPQPLYTPTGMRLAPPPPSGLPFNAQPRDRLRNDFTKPLGRSKS
EFDKTLSEAVVKVVIPTERILLVLIHRMVEFVVREGPMFEAIIMSKEKNNPDFRFLFDNK
SQDHVYYRWRLFCILQGESLSEWRTREFRMFQGGSIWRPPALNAYSSRDTARAGYDPGTP
QEEEEEEGKKGQLKAEHRRRLEGLLRELGPRRGEVAEAMAFCVERAEAAEEVVLLISESL
SMLHTPLQKKISRLYLVSDILYNSCAKVAGASYFRKYFESKLLQIFGDLHAAYKNIQGRL
QAEQFKQKVMGCFRAWEDWAIYPEAYLLHLQNVFLGFTKAAEETADKAEGSPPDLDGAPL
EGPLLDGEVLDELDGAPLVWDPLDGVPVDDIDGVPLGVVPATAAAAMDDIDGMPLDDGSG
PFPGVARSKWEQRSLSEEFQQVKTESKWDAVVGPAGDEEDLAVRSSRLEKGGHSESESSD
GSSPSKYDSADFENSLRTFQMSEGKRKRLREIEVKVMRVQDELESGQRSRRSGMSLQQQV
GHYRRKLLQKEFDNEEEQSESSSSSKSNRPREERRDKEKSKRSDHRGGRGRSSDSDDAAQ
THRSVSPSRGRSPRRAKLSRSPSADRRARRSKSRSPHRSHKKSKKSKR
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggcggaaagaaagggaaaacctgccagtgcaataaaatcactgtcgaagagggaacag
gaggagctcaagaagaaggagcaagagaaggcagcggaggtgtttgaggagttcctagcg
tcgttcgaaggcagcaccaagagcggggtgaagacgtttgtgcgaggaggcatcgtgaat
gtaactaaagaagaggaagcagcagacgtttccagaaacaagctctatcgaccagccgcc
aagttcaactccacacccccccctgtatcgctagcacattctcctgatgccaaaaagcct
atattcaagaagaaggtagaaggaaagaagaggagcaacctcgaactatttaaagaagag
ctcaaactcatacaggaagagcgggaggagcggcacaagaggaagaaaaatgaccccgga
ggaggaggaggaggaggcggagcctatggagacctggacacaccgttgtcaaggcgatca
agtttctatgacgacactgtgttgcccatcaccactaacctctacatcagctgcatcagt
ccaaagatgaatgaggagatgctctgcaaggagtttgggaagtacgggcccctggccagt
gtgaagatcatgtggccccggacggacgaggagcgctgccggaccaccaacagggccttc
gtggcctacatgacccgccgggacgccgagagagccctggcctctctggacggtaaaacg
gtgatgggctttgagatgaagctgggctggggcaagccggcccggatccctccccagccg
ctctacacgcccacggggatgaggttggccccgccgcccccctccgggctgcccttcaac
gcccagccccgcgaccgcctccgcaacgacttcaccaagcccctgggccgctccaagtct
gagttcgacaagactctgtccgaagctgttgtcaaggtggtcatccccaccgaaaggatc
ctgctggtgctcatccacaggatggtagagtttgttgtgagggaggggcccatgtttgaa
gccatcatcatgagcaaggagaagaacaacccagacttcaggttcctgtttgacaacaaa
agccaggaccatgtgtactaccgctggagactcttctgcatcctccagggcgagtcgctg
agcgagtggcggaccagagagttccggatgttccagggcgggtcgatatggcgtccgccg
gccctgaacgcatacagcagccgggacacggcccgggccggctacgaccccgggaccccc
caagaggaggaggaggaggagggcaagaaggggcagctgaaagccgaacaccggcggcgc
ctggaggggctgctgcgggagctgggcccgcggcggggcgaggtggccgaggccatggcc
ttctgtgtggagcgcgccgaggcggccgaggaggtggtgctgctcatcagcgagtcgctg
tccatgctgcacacgccgctgcagaagaagatctcgaggctatatcttgtgtcggacatc
ttgtacaactcgtgtgccaaagtggccggtgcatcttacttccgtaaatactttgaatca
aagctgctccagatattcggggacctccacgctgcatacaagaacatccaaggccgactg
caagccgaacagttcaagcaaaaggtgatggggtgtttccgagcgtgggaggactgggcg
atctaccctgaggcctacctcctccacctccagaacgtcttcctgggcttcaccaaggca
gcggaggagacggccgacaaggcagagggctctcctccagacctggacggggcccctctg
gagggcccgttgttggacggcgaggtgctggacgagctggacggggcccccctggtctgg
gaccccctggacggggtccccgtggacgacatcgacggggtcccgcttggggtcgtcccc
gctaccgccgccgccgccatggacgacatcgacgggatgccgctggacgatggcagtggt
cctttccctggggttgccaggtccaaatgggagcagaggagtctctcggaggagttccag
caagtcaagacagagtctaaatgggatgcagtggtggggcccgccggggacgaagaggac
ctggctgtgaggtccagccgcctggagaaaggcggccactcggagagcgagtccagcgac
ggctcgagtccgtctaaatacgacagcgccgacttcgagaactccctgagaaccttccag
atgtctgaggggaagaggaaaaggctgagggagatcgaggtgaaggtcatgagggtgcag
gacgagctggagtcgggccagcgctcccggaggtcggggatgagcctccagcagcaggtg
ggacactacaggaggaagctgctgcagaaggagtttgacaacgaggaggagcagagtgag
tcctcgtcctcctccaagtccaaccggccgcgggaggagaggagagacaaggagaagagc
aagaggagcgaccaccgcggagggagggggaggagctcggactcagacgacgcagctcag
acacacagaagtgtctctccttccagagggagatccccgcggcgggccaagctgtccaga
tctccatccgcagaccggcgggcgaggagatccaagtcccgatcgccccaccgctctcac
aaaaagagcaagaagagcaaacgctaa

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