Gadus morhua (Atlantic cod): 115547876
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Entry
115547876 CDS
T10832
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115547876 (cfap54)
Cilium and associated proteins [BR:
gmh03037
]
Motile cilia and associated proteins
Sperm associated proteins
115547876 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
115547876
NCBI-ProteinID:
XP_030218237
LinkDB
All DBs
Position
7:complement(24261250..24290017)
Genome browser
AA seq
2667 aa
AA seq
DB search
MVFKNTAFESRPPVVSGDQLLTTRSDSRQGRRNPTGRLLGELFESCGAACFLALLEALWD
GRPLLHTRALQEEPETQGALLELFSAGISILSGASGVKGRKDVDGEPWLGCFSALTTESS
QLELAVSGQNTVCLASALRFIELLFHYEQHSVFTTLARHMQHALQGMEGRLFRKAESELS
LLEGLVFLQSAQKTRSKEDHTPNDTFGVVLSEECFGMFEVLYQCVCSSAQDVWPDRDLVL
AAVLNLWARLKALFQSTELQPLHSKHYSEHPKLLWCLWALYEVASACDLASTDCLTTGEL
TFRLALLLEHTANHNKQTSACRDEGAVEPSARSILKRPSGELLHMMCEVAERGQDALSRG
WASLPDQTESIDQKSPIPEERQGTANEEAERRTRLCLERPGALSRTALDLNLELLKAHHR
ASLKRLQLHPEGGSEDDLLDRIRNNKVSRAIFLTQKALVVHGDMETNRTNKTKSLLEQAV
VLIEKAEVEERRSLKPRKPPPSAGQEESPDDGPPPAPLLLSSTNHSLSFIPAPYHTNQQV
CWYQICGRAATTIDLRVRLGDHSLQGTGHLVPVVGGQCQLTVEGLEHNQKYVFAVAAYGS
QGALLGNAIGQSSRPMLASIPLPTLSTWALLAQVAFETEQFAVAKRACGELWNHFTQSDS
PQQSPETHSSTQTNLSPTGLNVERLERSSPLLLRWFLSSVFIETDINVQQGALFCDSLSE
KGLHIWAQNARLAECERLLLAVDLGLWCGDSSAALQAVVSCYGLLAPLIYHQIVWEPMVQ
VLMKCMAVLEENSALFKERRSTETSEALLLMVACLTYYLARALGVLERSDASQVMERGQK
LLQGLYQAQVVLSRPTDGPRMSRKLIAASHQEMGLQLRGLSRYQTGGDPKRNSQGNGGVT
HTQDPIGFHHLVLNGDLESAHLDVMKLRRKVFFLEVVVLHLQRAIAADKPDLVVQWATDI
FACVLKNDKSMGLSTKGVEAPPTASLNPPGKHKKHQKETGEEQAVEALIKRLSYVRQKSH
QRLQRRCLFEEQRVWRSQLNHLMAQAHLALLHRALAQLHTPAVHERYSQFHPWAFSLARS
GVLLAPSSPLGNHRDQPTSAMSIDGDKDEVVSVEDSKDSDEQLDHLDPPITPSAVLDSLH
KAALYLRRAMVLAHRGSHWACLQYACRTAWEQSSSLAALVARDPKPPPAAPCPISLDLLE
STFTPLLVVATDLLMDMLDTLGLWKALESEASQEDVESSVGSQVDVRWVQTLVLDTLGLL
HAHAKWESLAHYALLFNCFTGGRYTLQVSPLLIHAQKRLLERVTDFNGPPVPQPHHVRTQ
RYTETPVTWRNYADYQLLSGWRPASRSKSNRPHSKLHFHEDHKTKAVSRARGLVRVPLDV
EDTQAAYRLALQNRPHSLHLLQHSRTLLQLLLAHTHFTAGVQRGEGGGGQGPPGQVEICP
AVTDGPDPRPQDLTCRDFTNPSQLYSLPLGPEHTDTVIAAYAASIKCLEAHGPRVQALHD
LGNLQLYSGDSRAAHSSWSKAVDCALHSVGVLDTWDGACWAGGPRSQQETQRLAGVWGCL
QAAVITAKTAQYVLVSHIQQRTMCCLLSAYLFKCVLCSSQPHPQRDLLYGSYSVGEQLLP
GVDLFSDPIRVHPPTTVASLHFLCHWLYSTRHYVTLLPMLALYLYFVRSRCRDVQRTVEG
TLLKVHALTELSMFGQAIKEAVELSHGQGVTLPYGPSINAQQPTRKFHDNKPLTENLQAV
EELANCQLSEEVRGRCDPGMSQRFSLARVQLVLALCETVPGLPLPGPCAETAVTTEEPSV
STAGPDQDPLDAESPSQGWTEPDGLVLELGSEGDRLSLGRVKYVLLDWVQRALESSGGPL
QACGGPEYCSSAQQDLEITVEAHLLLSNMHLQLGHAALSADMAARSLEMLQTSASLQGEA
PGPSHLNAWQVTEGSPLTVPSPADCPGAVEARERLGAPLWLRCRLALLRGLAAHLPGTAV
HPGPDSSEEAARVLKEGLNECTSWGDPDTHALMLLVAAAAHTNRGAHKREADPTAMLHEA
VRLLSDRTWMPAASSLALALATMQLGALKGTHSTALLEMGQRLLQQQLTVFGESVEVKSG
GVILPPQGLNNIYLPQLPLLAKTTMQIGNILALRAAERSSNPAPDASLPASSPDTQGGLP
EPLAPVGPPCQRELPAGVHRWRVAREVLGSALGLSRSSARRDMQVEASLLHCRGIVECSL
RFFGLVKRQEVARTFVHCIQTTMTHSHNLQVHHQCYLEVAFLFLQDWQNIPPKTPRQTPN
KGSHWRNMMAGLKSRLMVAEEHLMPYWVCLRAAHMVMSSMRSTAQLGGSTAEEDREGGGG
GGGGGGGGGALSSQELSTLPGFARNDLLHSCGGVSKSARDAGTERSFKEDSSTHPTLTWS
HLARYYTHLLNLQYATSTGICSTLLAGDVSIAARLSQLHSFYCEHSSSYTETCCPPQPVP
ARIMLQAPLTQRSRAFRGPMLQEEEEEEVYKWSISPRPQLCVQWYQPCLTPSLGAQDTVI
LLYGFNSHPISATGGSANGVLGLQCGHYEIRMDRVRAVHAELCEVCVLADIRLSAAEDSL
CTSGIAPPSPAAAGDKTMKVLEERTLACCLSIQALLRPGPRPTPLTQVPFEVSLENVSEL
ERCFDPFGGAILESSLLTEWILATLMP
NT seq
8004 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcaagaatacagcttttgagtcgagaccccctgtagtgtctggagaccaacta
ctgacgaccaggtccgacagccgccaggggcggcggaaccctacagggcggctgctgggg
gagctgtttgagagctgcggtgcggcctgcttcctggccctgctggaggccctgtgggac
ggacgcccgctgctgcacacccgggccctgcaggaggagccagagacacagggggcgctc
ctggagctcttctctgccggcatcagcatactctctggagccagcggcgtgaagggccgt
aaagatgtggacggtgaaccctggctcgggtgcttctctgctctgacaacagaatccagt
caactggagctggccgtttcaggacaaaacacagtgtgtttggcgtcggccctgaggttc
atcgagctgctgttccactatgagcaacacagcgtgttcacaacactggcacgacacatg
cagcacgcgctgcagggcatggagggccggttatttaggaaggcagaatctgagctttct
ttgcttgaaggtttagtttttctgcagtctgcccagaagactcgctcaaaagaggatcac
acacccaatgacacgtttggggtggtcctcagtgaagagtgctttggcatgtttgaggtc
ttgtatcaatgcgtctgcagctctgctcaggatgtttggccagacagggatcttgtgctg
gctgctgtgttgaatctgtgggccaggctgaaagccctgtttcagagtactgagctccag
cccttgcactccaaacactattctgaacacccaaagttgctatggtgtctgtgggctctg
tatgaagtggcttcagcctgtgacctggcctccactgactgcctaaccaccggggagctg
accttcagactggcactactgctggaacatactgccaatcacaacaaacaaaccagtgcc
tgccgtgacgagggagctgtggagccttctgcccggtccatcctcaagaggcccagcggg
gagctcctccacatgatgtgtgaggtggcagagaggggtcaggacgccctaagcaggggc
tgggcttctctaccggaccagaccgagtccatcgaccagaaatctccaatcccggaggaa
aggcagggaaccgccaatgaagaagcagaaaggagaactagactgtgtctagagcgaccc
ggtgcgctgtcccggaccgccttggacctgaacctggagctcctcaaagcccaccacagg
gcctctctgaagagactgcagctccacccggaaggtgggtccgaagatgatcttctggat
cggataaggaataacaaggtgtccagggctatctttctgactcagaaagccttggtggtg
cacggcgatatggagacaaacaggactaacaaaaccaagagtttactggagcaagccgtg
gtcctgatagagaaggctgaggtggaggagaggaggtcgctcaaacccagaaaacctccg
ccctccgccggacaggaggagagcccagatgacggacctccacccgcaccactccttctg
tccagcaccaaccacagcctgagcttcataccggcgccctaccacaccaaccaacaggtg
tgctggtaccagatctgtgggcgtgcggcgaccacgatcgacctgagggttcgtctcgga
gaccatagccttcaaggcaccggacatttggtcccagtggtgggtggtcagtgtcaactg
actgtcgaggggctggagcacaaccagaagtatgtgtttgcagtggcggcctacggcagc
cagggagccctgttgggcaatgccatcggacagagctcaaggcccatgttggcctccatt
cctctgcctacgctctccacctgggcactcctggcacaggtggcgtttgagacggagcag
tttgctgtggctaagagagcctgtggtgagctgtggaaccacttcacccagtctgacagc
ccccagcaaagcccagagacccacagcagcactcagaccaacctctcacccaccgggctc
aatgtggagaggctagaacgttcctcccctctcctcctccgatggtttctgtcctcagtc
ttcatagagacagacatcaatgtccagcagggggctctcttctgtgactcgctcagcgag
aagggcctgcacatctgggcacagaatgcccgactagctgagtgtgagcgtttgctgctg
gccgtggacctgggcctgtggtgcggtgacagctctgcagccctgcaggcggtggtgagc
tgctacggcctgctggcccctctcatctaccatcagattgtgtgggagcccatggtgcag
gtgttgatgaagtgtatggcggtgctggaggagaactcagctctttttaaagagaggcgt
tctacagagacctcagaggctctgctcctcatggtcgcctgcctcacttactacctcgcc
agggcgcttggggtgctggagcgctccgatgcgtcccaggtgatggagcgtggtcagaag
ctgctgcaggggctctaccaggctcaggtggtcctgagcaggcccaccgacggcccccgc
atgtccaggaaactcattgctgcaagccatcaagagatgggtcttcaactcaggggcctg
agcaggtaccaaacaggaggagaccccaaaaggaactctcaaggaaatggaggggtaacg
cacacacaggaccccatcggattccatcatcttgtcctcaacggcgacctcgagagtgca
cacctcgacgtgatgaagctgaggcggaaggtgtttttcctggaggtggtggttctgcac
ctacagagagccatagcagcagacaagcctgacctggtggtccagtgggcgacggacatc
ttcgcctgtgtattaaagaatgacaagagtatgggtctttccaccaaaggagtagaagcc
ccgcccactgcatccctgaacccgccagggaaacacaagaaacaccagaaggaaacaggc
gaggagcaggcggtggaggcgttaatcaagcgcctctcgtacgtgaggcagaagagccac
cagcggctccagaggaggtgtctgtttgaggaacagagggtgtggaggtcccagctcaac
cacctcatggctcaggcccacctggccctgctgcacagagccctggcccagctccacaca
cccgctgtgcacgagagatacagccagttccacccgtgggccttctctctggcccgctcc
ggtgtactgctggccccttcgtcacctcttggtaaccatagagaccaacctacctccgcc
atgtccatagacggggacaaagacgaggtggtcagtgtggaggacagtaaggactcagac
gagcagctagaccacctggacccccccatcacgccctctgctgtcttggactcactacac
aaggcagctctgtacctccgcagggccatggtcctggcccaccgggggtcccactgggcg
tgtctccagtacgcgtgtcggacggcctgggagcagagcagcagcctggctgctctggtg
gccagagaccccaaacctccacccgcagccccctgccccatcagcctggacctgctggag
tccaccttcacccccctactggtggtggccaccgacctgctgatggacatgttggacaca
ctagggctctggaaggcgttggagagtgaggcgagccaggaggatgtggagtccagcgtg
ggcagccaggtggacgtacgctgggtgcagactctggtgctggacaccctggggctgcta
cacgcccacgccaagtgggaatcactggcccactacgccttgctcttcaactgcttcacg
ggggggcgctacaccctgcaggtcagtccgctcctgatccacgcccagaagagacttctg
gaaagggtcactgacttcaacggaccccctgttccccaaccacaccacgtcaggacacag
cgctacactgagactccggtaacttggaggaactacgcagactaccagctgctcagtgga
tggcggcctgcatctcgatctaaatctaacaggcctcactccaagctgcactttcatgag
gaccacaagaccaaagccgtgtccagggcaagaggtttggtgcgtgtacccctggatgtt
gaggacacgcaggctgcttaccgcctggctctgcagaaccgaccccactccctccacctc
ctccagcacagccgcaccctcctgcaactccttctggctcacacacacttcactgctggg
gtccagcggggtgagggcggcggtggtcagggtcctccaggacaggtggagatctgtcct
gcggtcacagacggacctgacccccgacctcaagacctgacctgccgtgacttcaccaac
cccagccaactgtacagcctgcccctcggccccgagcacacggacacagtcatcgccgcc
tacgctgcctccatcaaatgccttgaagctcatgggccgagggtgcaagcgctgcatgac
ctgggaaacctgcagctgtacagcggcgactcgcgggcggctcattcgtcctggagcaag
gcggtagactgtgctctgcacagcgtgggcgtgttggatacgtgggacggagcgtgctgg
gcgggcggtccccggtcccagcaggaaacccagaggctggcgggcgtgtggggttgcctg
caggctgccgtgatcacagccaagaccgcacagtacgtcctggtctcacacatacaacag
aggaccatgtgctgcctgctctctgcctaccttttcaaatgtgtgttgtgtagctctcag
ccccatccccagagggacctcctttatggttcctacagtgtaggggagcagctgcttcct
ggggtggacctgttctctgatccaatcagagtccaccctccaaccaccgtggccagcctt
cacttcctgtgtcattggctgtacagcacacgccactatgtcacgctgctgcccatgctg
gccctgtacctgtactttgtgaggagccggtgccgagatgtccagcgcactgtagaaggc
accttactgaaggtgcatgctctgactgagctcagtatgtttggccaagccataaaggag
gcggtggagctttcccacggacagggagtgactctgccttatggcccgagcatcaacgcc
cagcagccgacaagaaagttccacgacaacaagcccctcacggagaaccttcaggcagtg
gaggagctggcaaactgccaactgagcgaggaggtcagaggtcggtgcgaccctgggatg
agccagcggttcagcctggcccgggtccagctggtcctggccctctgcgagaccgtaccc
ggactccccctcccggggccctgtgctgagactgctgtgaccactgaggagccatcggtc
agcacagcagggcccgaccaggacccgctggacgctgagagccccagccaggggtggacg
gagcctgatgggctggtgctggagctgggctctgagggggacagactgagcctagggagg
gtcaagtacgttctgctggactgggtgcagagggcgctagagtccagcggtgggccacta
caagcctgtgggggtcccgagtactgcagctcagctcagcaggacctggagatcaccgta
gaggcccatctgctgctgagcaacatgcatcttcagctgggacatgcggcactcagtgcg
gacatggcagccaggtctctagagatgctgcagacgtctgcctctctacagggggaagca
cctggcccctcccacctcaacgcctggcaggtcactgaagggtcccccctgacagtcccc
tccccagcagactgccccggagcagtggaggccagggagagacttggagcccccctgtgg
ctgcgctgtcgcctggctctcctccgcggcctcgccgcccacctccctggcaccgccgtc
cacccaggtccagacagcagtgaggaagcagcgagggtgttaaaggagggtctgaacgag
tgtacctcctggggtgacccggacacacacgccctcatgctgctggtggctgctgcagcg
cacacaaacagaggagcgcacaaaagagaggctgaccccaccgccatgctgcatgaggca
gtgcgtctgctgtcagacaggacatggatgcctgccgcctccagcttagcactagcttta
gccacgatgcagcttggtgccctgaaaggtacacacagcaccgccctgttggagatggga
cagagactgctgcagcaacagctgactgtgtttggtgagagtgtagaggtgaagagtgga
ggagtgattcttcctcctcaaggtctcaacaacatctacctgccacagctccccctgctg
gccaagacaaccatgcaaattggcaacatcctggccctcagggctgcagagagaagctct
aaccctgctcccgatgccagcttgccggcatcctcccctgacacccagggtggcttgccg
gagcccttggctcccgtcgggcctccctgccagagagagctccccgctggggtccaccgc
tggagagtggcccgggaggtgctgggctctgccctgggcctctccaggtccagcgcccgc
agagacatgcaggtggaggccagcctgctccactgtcgtggaattgtggagtgcagtttg
aggttctttggtctggtgaagagacaggaggtggccaggacgttcgtacactgtatccaa
actacaatgacacacagccacaatctacaggttcatcatcagtgttatctggaggttgcg
ttcctcttcctacaggactggcagaacattcctccaaagacacccagacaaactccaaat
aaaggttcccattggaggaacatgatggccggtctgaagagcaggctgatggttgcagag
gaacacctgatgccctactgggtctgcctccgagcagcccacatggtgatgtcctccatg
aggagcactgctcagctgggtggctccacagctgaggaggacagggagggaggaggagga
ggaggaggaggaggaggaggaggaggagcactgtccagccaggagctcagcaccctcccg
ggcttcgccaggaatgacctgctccactcctgtggtggtgtgtccaagtcggccagggat
gcagggacagagcgcagctttaaagaagacagcagcacacaccctacactcacctggtcc
cacctggctcgttattacacacacctgctgaacctgcagtatgcgacctcaacaggcata
tgttcaacgctgttagcaggagacgttagcatagcggcgcggctctcccagctccattcc
ttctactgtgaacacagcagcagctacacagagacctgctgccctccacagcctgtcccc
gcacgcatcatgctgcaggctccactcacacagcggagcagagctttcagaggccctatg
ctccaggaagaggaggaggaggaggtgtacaagtggtccatctcccccagacctcagctc
tgtgtgcagtggtatcagccctgcctcacccccagtcttggagcacaggacacggtgatc
ctactgtatggatttaacagtcatcccatttctgccactggaggatcagccaatggcgtg
ttagggttgcagtgtggacactatgagatcagaatggatagggtgagagcggtgcatgct
gagctgtgtgaggtgtgtgtgttggctgacatcagactgtctgcagcagaggactctctc
tgcacttcgggcatagcccccccaagccctgcagccgcaggggacaagaccatgaaggtc
ctggaagagcggacgctggcctgctgtctgtccatccaggcactgctccggccaggcccc
aggcccacacctctgacccaggtgccatttgaggtctctctggagaacgtcagtgagctt
gagcgatgttttgatccctttggaggagccatcctagaaagctctctgctcactgaatgg
atcctggctaccctgatgccctga
DBGET
integrated database retrieval system
