Gadus morhua (Atlantic cod): 115548181
Help
Entry
115548181 CDS
T10832
Name
(RefSeq) oxysterol-binding protein-related protein 1-like isoform X1
KO
K20174
oxysterol-binding protein-related protein 1/2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
115548181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115548181
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115548181
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
115548181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oxysterol_BP
Ank
Ank_2
Ank_4
Ank_5
Ank_3
PH
Motif
Other DBs
NCBI-GeneID:
115548181
NCBI-ProteinID:
XP_030218475
Ensembl:
ENSGMOG00000003066
LinkDB
All DBs
Position
8:complement(7588925..7611883)
Genome browser
AA seq
998 aa
AA seq
DB search
MSVQPESDGREGHSVMDPAELEAQLLLHAEEGDRSRVQSLLRLMMAQSQHFNLNCRSRSD
ARAGWTPLHLSSHFGHTDVVEDLLKAGAHVNLQDDLGDTALHKAASSGRKVTGCVPVMEI
VLTLLRYDACASIINGTAQVPRNFTEDDEIITMLEAAERRAVRRKEDNLLHAAREGDIVA
LSKLLSLKEAPDVHCRDLLGNTPLHCAAYRGQEHCVVKLLKHGASPSLTNKNAQTAFDIA
CTDELKQILAAAAVKETSSTVEKCEGPLWKSSRFLGWRYHWVVLENGNLSWYLSRADARS
GHRRQGSEALALAYCMIKPWDNCYFALRRFDSTDFHFKVSSKTNSITTRRKWLDAFDVHS
AYSSRHCSQEQAMAGHDEEEGGEDAKAGDSLTRAFEEASASQEKLECEVSVFLSMVKNEQ
NDALAAPLLLKARQTSALSGETCTALQSCLALLSKQEEVWHLKLEQELEKNKALTEALQI
LATERYDTSLSRVRKSPTPSALTGDFYDAESDTDSELSLSGFLSVASRSYDEDEAPDAPL
FRSLRRGRPTGEPRAMSGDGDHGHQAAQCNGVKKYRSSLPAPMFSRNDISVWSILKKCIG
MELSKIAMPVMFNEPLSFLQRLAEYMEHTYLLQQANTSTDSVERMKCVAAFAVSAVASQW
ERTGKPFNPLLGETYELIREDLGFRWVSEQVSHHPPVSAFHAEGLKEDFLFHGSIYPKLK
FWGKSVEAEPKGVITLELPKHNEAYTWTNPTCCVHNIIVGQLWIEQYGQVEVINHKTGER
CSLTFKPCGLFGKELHKVEGYILDKSKKKLCAIYGKWTECLYAVDPAAFEAHRKADKKSA
EEKKTKQGSADEEPEELPPPDAETVQVIPGSELIWRIAPRPDNSAQFYAFSTFAMQLNEL
ERAMEESIPSTDCRLRPDIRAMEVGDIDLSSGEKKRLEEKQRLARKNRSKSSEEWKTKNP
ALGPRWFAQGPNPHNKAQDWLFSKGYWERNYNQLPNIY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccaacctgaaagtgacggtagggagggtcactcggtgatggacccggccgag
ctcgaggcccagctgctccttcatgcagaggagggcgatcgatcacgtgttcagagtctc
ctccggctcatgatggcccagagtcaacatttcaatctcaactgcagatctcggagtgat
gccagggcgggatggacgccacttcatctctcaagtcacttcggtcatacggatgtcgta
gaggacttgctcaaggctggggcccacgtgaacctgcaggacgacctgggcgacacagcc
ctgcacaaggcagcctcctcgggcagaaaggtgaccggatgtgtgccggtgatggagatt
gtcctcacgctgctgcgctacgacgcctgcgccagcataatcaacggcacggcgcaggtc
cccagaaatttcaccgaggacgacgaaatcatcacgatgctggaggcggcggagcggaga
gctgtgcggaggaaggaggataacctcctgcacgcggcaagagagggagacatcgttgct
ctttccaagctgctgagcttgaaggaggcgcctgacgttcactgcagggacctgttgggc
aacacgccgttacactgtgccgcctatagagggcaggagcactgtgttgtgaagctcctc
aagcacggagccagccccagcctcacaaacaagaacgcccagacagcatttgacatcgct
tgcaccgatgagctgaaacagattctggcagctgctgctgtcaaagagacgagcagcacc
gttgagaagtgtgaaggcccactgtggaagagctcccgctttctcggctggcggtatcat
tgggtggtgctcgagaatggaaacttatcttggtacctcagccgagctgacgcacggagc
ggccacagaaggcagggctccgaggccctcgcgctggcctactgcatgatcaaaccctgg
gataactgctacttcgcgctccgacgcttcgacagcactgatttccatttcaaagtgtcc
tcaaagaccaactctatcacgacaagaagaaaatggttggatgccttcgatgtccattcg
gcctacagcagccgccactgtagccaggagcaggcgatggctggacatgatgaggaagag
ggtggtgaagatgctaaggcaggggatagcctgactcgcgcttttgaggaagccagtgcc
tcccaggagaaactggagtgtgaggtgtctgtgtttttatccatggtgaagaatgagcag
aacgacgcgctggctgcccctctgctgctgaaggccaggcagaccagtgctctgtctggg
gagacctgcaccgccctccagtcctgtctggccctgctctccaagcaggaggaggtgtgg
cacttgaaattggagcaggagcttgagaaaaacaaggctctcacggaggcgcttcagatc
ttggccaccgagcgctacgacacgagcctcagcagggtcaggaagtcgcccactcccagc
gccctgaccggagacttctacgatgcagagtcggacaccgactcggagctctcgctgagc
gggttcctctccgtggccagccgctcctacgacgaggacgaggccccggacgcccccctc
ttcagaagcctccgccgcggccggcccaccggggagcccagagccatgtccggggacggg
gaccatggccaccaggcggcccagtgcaatggggtcaagaagtacagatcgtccctgccc
gcgcccatgttctctaggaatgacatcagtgtatggagcatcctgaagaaatgcattggc
atggagttgtcgaagatcgccatgcctgtgatgttcaatgagcccctcagcttcctgcag
cggctggctgagtacatggagcacacatacctcctccagcaggccaacacctccaccgac
tctgtggagaggatgaagtgtgtggcagcgtttgctgtgtcggctgtcgcctcgcagtgg
gagaggactgggaagccgttcaacccgctgcttggggagacctacgagctgatcagagag
gacctgggcttccgctgggtgtcggagcaggtgagccaccacccgccggtcagtgccttc
cacgcggagggcctgaaggaggacttcctgttccacggatccatctaccccaagctcaag
ttctggggcaagagcgtggaggcggagcccaagggggtcatcaccctggagctgcccaag
cataacgaggcgtacacctggacaaaccccacctgctgtgtccacaacatcatcgtgggc
cagctttggatcgagcagtacggccaagtggaagtgatcaatcacaagaccggtgagcgg
tgtagcttgacattcaaaccctgcggcctcttcggcaaagagctccataaggtggaaggg
tacatcctggataaaagcaaaaagaagctgtgcgcaatctacggcaaatggaccgaatgc
ttgtacgccgtagaccctgctgccttcgaagcacacaggaaagcagacaagaagagcgca
gaggagaagaaaaccaagcagggcagtgcggacgaggagccggaggagttgccgccgccc
gacgcagagacagtgcaggtgatcccaggcagtgagctcatctggaggatagccccacgc
cccgacaactctgcccagttctacgccttctccacgttcgccatgcagctgaatgagctg
gagagggccatggaggagtccatcccctccacagactgccgccttcggccggacatcagg
gccatggaggtcggagacatagatttgtccagtggagaaaaaaagaggttggaggaaaag
cagagattggcccgtaaaaatcgctccaaatccagtgaagagtggaaaaccaagaaccct
gcacttggcccaaggtggttcgcccaagggcccaacccccacaacaaggcccaggactgg
ctcttctccaagggttactgggagagaaactacaaccagttgcccaatatctactga
DBGET
integrated database retrieval system
