Gadus morhua (Atlantic cod): 115548186
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Entry
115548186 CDS
T10832
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115548186 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115548186 (ss18)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115548186 (ss18)
GBAF(ncBAF) complex
115548186 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
115548186
NCBI-ProteinID:
XP_030218491
Ensembl:
ENSGMOG00000003018
LinkDB
All DBs
Position
8:complement(7775079..7784346)
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AA seq
382 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMSMGPGGMNQSGAPPQPPHSHNMPSEGMGSGGPPAPHM
QGQMNGQMPGPNHMPMQGPGPGPNQPPNMPAGSMNMPPSSHGTMGGYNHAVPSSQGMPAQ
SQMNMTQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGAGQHYQGQQNPMGMM
GQVTQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGNAQYVQNQEA
YQQGPPQQQGYPPQQQYPGQQGYPPQQQGYGPSQSAPGQYPNYPQGQGQQYGAYRPPQPG
PPQGQQQRPYAYEQGQYGNYQQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggctttcgcacctcacaggcagcgtggaaagggggatatcactcccgcagga
atacaaaagttactagatgagaacaaccaactgatccagtgtataatggacttccagagt
aaaggcaagactgcagaatgttcacaatatcagcagatgctccacagaaatctagtgtac
ctggcaacgatagcagactcaaatcaaaacatgcagtcccttctaccagcgccgcccact
cagaacatgtccatgggccccggtggtatgaaccagagcggagctcccccccagcctcca
cacagtcacaacatgccctcggagggcatgggcagcggagggcccccggctccgcacatg
cagggccagatgaacggacagatgcctggacctaaccatatgcccatgcaaggacccgga
cccggccccaaccagccgcccaacatgcccgccgggtccatgaacatgccccccagcagc
cacggaaccatgggcggctacaaccacgccgtcccctcctcccagggcatgccggcccag
agccagatgaacatgactcagggccagcctatgggcaactacggcccccggcccaacatg
aacatgcagcccaaccaaggtcccatgatgcaccagcagcctccctcacagcagtacaat
atgccccctggtggcgccggccagcactaccaaggccaacagaaccccatgggtatgatg
ggccaggtcacccaggggaaccatgtcatgggccagaggcccatgccaccttacagaccc
ccgcagcaaggacccccacagcagtacccagggcaggaagactactatggcgaccagtac
agtcacgcaggacagggcgcctcagaaggtaacgcgcagtacgtccagaaccaggaggcg
taccagcaaggcccgccccagcagcaaggctacccaccccagcagcagtatcccggccag
caaggctaccctccgcagcaacagggatacggtccttcccagagcgccccgggccagtac
cccaactacccacaggggcaggggcagcagtacggggcctaccgcccacctcagcccggc
cccccccagggccagcagcagcgcccctatgcctacgaacagggccagtatggaaattac
cagcaatga
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integrated database retrieval system