KEGG   Gadus morhua (Atlantic cod): 115548186
Entry
115548186         CDS       T10832                                 
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115548186 (ss18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gmh03036]
    115548186 (ss18)
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    115548186 (ss18)
   GBAF(ncBAF) complex
    115548186 (ss18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 115548186
NCBI-ProteinID: XP_030218491
Ensembl: ENSGMOG00000003018
LinkDB
Position
8:complement(7775079..7784346)
AA seq 382 aa
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMSMGPGGMNQSGAPPQPPHSHNMPSEGMGSGGPPAPHM
QGQMNGQMPGPNHMPMQGPGPGPNQPPNMPAGSMNMPPSSHGTMGGYNHAVPSSQGMPAQ
SQMNMTQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGAGQHYQGQQNPMGMM
GQVTQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGNAQYVQNQEA
YQQGPPQQQGYPPQQQYPGQQGYPPQQQGYGPSQSAPGQYPNYPQGQGQQYGAYRPPQPG
PPQGQQQRPYAYEQGQYGNYQQ
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgtcggtggctttcgcacctcacaggcagcgtggaaagggggatatcactcccgcagga
atacaaaagttactagatgagaacaaccaactgatccagtgtataatggacttccagagt
aaaggcaagactgcagaatgttcacaatatcagcagatgctccacagaaatctagtgtac
ctggcaacgatagcagactcaaatcaaaacatgcagtcccttctaccagcgccgcccact
cagaacatgtccatgggccccggtggtatgaaccagagcggagctcccccccagcctcca
cacagtcacaacatgccctcggagggcatgggcagcggagggcccccggctccgcacatg
cagggccagatgaacggacagatgcctggacctaaccatatgcccatgcaaggacccgga
cccggccccaaccagccgcccaacatgcccgccgggtccatgaacatgccccccagcagc
cacggaaccatgggcggctacaaccacgccgtcccctcctcccagggcatgccggcccag
agccagatgaacatgactcagggccagcctatgggcaactacggcccccggcccaacatg
aacatgcagcccaaccaaggtcccatgatgcaccagcagcctccctcacagcagtacaat
atgccccctggtggcgccggccagcactaccaaggccaacagaaccccatgggtatgatg
ggccaggtcacccaggggaaccatgtcatgggccagaggcccatgccaccttacagaccc
ccgcagcaaggacccccacagcagtacccagggcaggaagactactatggcgaccagtac
agtcacgcaggacagggcgcctcagaaggtaacgcgcagtacgtccagaaccaggaggcg
taccagcaaggcccgccccagcagcaaggctacccaccccagcagcagtatcccggccag
caaggctaccctccgcagcaacagggatacggtccttcccagagcgccccgggccagtac
cccaactacccacaggggcaggggcagcagtacggggcctaccgcccacctcagcccggc
cccccccagggccagcagcagcgcccctatgcctacgaacagggccagtatggaaattac
cagcaatga

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