Gadus morhua (Atlantic cod): 115548187
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Entry
115548187 CDS
T10832
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecule (CAM) interaction
gmh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115548187
04517 IgSF CAM signaling
115548187
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115548187
Cell adhesion molecules [BR:
gmh04515
]
Immunoglobulin superfamily
L1 family
115548187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_6
Ig_PDGFR_d4
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
115548187
NCBI-ProteinID:
XP_030218498
Ensembl:
ENSGMOG00000010281
LinkDB
All DBs
Position
1:19132505..19146579
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AA seq
1187 aa
AA seq
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MGTLVPAGLLLLAWHCIRALDIPLEIRQPPTIVTQSPKDHIVDPKDTMVIECEAKGNPQP
IFSWRRNGKYYNVARDPQASMRRRSGTLDIYAWKDPQEYEAEYQCIASNEHGSAYSNKIL
LRLSRPPLWPNEILEPVVVSVGFPLVLSCDPPRGPPRPETYWMSSCSFARPFSWPIQTAF
PTMQAVRQDRRVSTGINGDLYFSNVLFNDSHTDYCCNARLPHKHSIQQKRPVVVKVITTR
TVSEAAPTWLSPIRSSSSVLVLQGEELLLECIAAGVPTPHITWTKDGEKLVVKPGMRIKN
FNKMIHIPKASFDDIGEYVCSAANKIGYTERTIIVQVKAAPFWLEKPVDLVLAPEENGAL
VCRSDGIPRPTIRWFINGEALDTALPHPSRHMSGDTLSFRGVTMENTGVYQCNASNQFGY
LLANAYVNVLHATPRIIPPQEEHLKVVEGSNTFLECRYFGSPVPDLRWSKYGQGNLEGHR
FRTHSNGTLEIKQIRLEDTGTYMCIVTNIAGRDESQIRVEVKEPTLFVSRPQNLKVLRGS
DVTFECGVKADASTPVTTTWLKNKRPLSLNWRISLDESNLVITTVNSADDGEYTCSIKTE
MDEKSASARLMVMDRPNPPTNLQLSDPHERSVRLSWVPGDHNHSPITEYQVQYDEDDWLP
GKWRNLSTYPGNLNSVILQLTPYTYYEFRVIAVNAIGPSRPSRVSSRLQTGGAPPDVIPR
NIRGVGTWRNNMEISWEPLTYREWNGPYLKYLVWWKRKDSREEWKNATTKWLRYYIYDAD
TFTPYEIKVQAFNSFGLGPESKVIIGYSGEDRPSTAPLNLRVSDIESTQVTLHWDPVARN
SLMGELKEYKVYYWRDSSQLRWLSVSRAMKSKGFPAVDTEYTGVLDELLPYSNYKMHIVV
ANNRYDGPPSHTIQFSTPEGVPSVPKSFRIQQRHLDTIYVDWALPAEPNGIITGYTLKYQ
TVNATRGEEMHVEEFYSNVTSFSVRRYDRYTRYRFSLAAKTQVGLGEWHTEESAHYTTEA
YATDQVDLSTKGWLIGIMCAVAIIVLFLLIVCFIKRSRGGKYPVREKKEISLEPVDDKDQ
EGTFDYRSLERIARVVTLPFPRREEERGLQRGQASVEPIMKRTESDDSLVDYGDVEIQFN
EDGSFIGEYTGTSRKDAARDARDVRDEMDYGGNMDLHSTMNAIYSMA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggggacactggttccagcaggcctactgctattagcatggcactgcatacgtgccttg
gacatcccactggagatcagacaacctccaaccatagtgacgcagtcgccaaaggaccac
attgttgacccgaaggacaccatggtcatcgagtgtgaagctaaaggcaaccctcagccc
atcttctcgtggaggcgtaacgggaagtattacaacgtggcgcgtgaccctcaggcctcc
atgcgccggcgctccgggacgctggacatctacgcctggaaggacccgcaggagtatgag
gcggagtaccagtgcatcgcctccaacgaacacggctctgcgtactccaacaagatactg
ctgcggctttcaagacctccactgtggccaaatgagatcttggagccggtggtggtcagt
gtgggcttccccctggtcctctcctgcgaccccccgcgcgggccgcccagacccgagacc
tactggatgtccagctgctcgttcgctcggccgttctcctggcccatccagacggccttc
cccaccatgcaggctgtgcggcaggaccgccgggtctccaccggcattaacggggacctc
tacttctccaatgtgctctttaacgactcccacaccgactactgctgcaatgcccggctc
cctcacaaacacagcatccagcagaagaggcctgtggtggtcaaggtgatcacaactcgt
accgtatccgaggccgcccccacctggctgtcccccatcaggtcctccagctcagtcctg
gtcctgcagggggaggagctgctcctggagtgtatcgccgcaggagtgccgactcctcac
ataacctggaccaaagacggggagaaactagtggtgaagccaggaatgaggataaagaac
ttcaacaagatgatacatatccccaaggcctcctttgatgacatcggtgaatacgtctgt
tcagctgccaacaaaattggctacactgagcgaacgataattgtccaagtcaaagcggcc
ccattctggttggagaagccggttgacttggttttggcccctgaggagaatggagcccta
gtatgccggtctgacgggattccccggcctactattcggtggttcatcaacggcgaggca
ttagacactgccctcccccatcccagcaggcacatgtccggggacacactgagctttcgt
ggtgtgacgatggaaaacacgggtgtctatcaatgtaacgcctccaatcagtttggttac
ctacttgccaacgcctatgtcaatgtgctacacgcaaccccccggatcataccaccccag
gaagagcatctcaaggtggtggagggaagcaataccttcctggaatgccgatattttggt
tctccagtgcctgacttgcgatggagtaagtatgggcaggggaacctggaagggcaccgc
ttcaggacccacagtaatggcaccctggagatcaagcagatccgcttggaggacacgggg
acgtacatgtgcatcgtgaccaacatcgcgggcagggacgagagccagatcagagtagaa
gtgaaagagccaacgctgtttgtgagcagacctcagaacctgaaggtcctccgtggcagc
gacgtgacctttgagtgcggtgtgaaagcagacgcctccacccctgtcaccaccacctgg
ctgaagaacaagcggccgctctcgctgaactggaggatctccctagacgaatccaacctg
gtcatcaccaccgtgaacagtgcggatgacggcgaatacacctgcagcatcaagacagag
atggacgagaagtcggcctccgctcgcctcatggtgatggaccgccccaaccccccgacc
aacctgcagctgtcagacccccacgagcgcagcgtccggctcagctgggtgcccggggac
cacaaccacagccccatcacagagtaccaggtgcagtacgacgaggacgactggctgccc
ggcaagtggaggaacctgtccacctaccccgggaacctcaactcggtcatcctgcagctg
acgccctacacctactacgagttccgggtcatcgccgtcaacgccatcggacccagccgg
cccagcagggtgtcttcacgcctgcagacgggcggggcacccccggacgtcattcccagg
aacatccggggagtgggaacatggaggaacaacatggagatcagctgggagccgctgacg
taccgggagtggaacgggccctacctgaagtacctggtgtggtggaagaggaaggactcc
agagaggagtggaagaacgccaccaccaagtggctgagatactacatctacgacgccgac
accttcaccccctatgagatcaaggtccaggcgttcaacagcttcggtctgggacccgag
tccaaggtcatcatcggatactctggagaggaccggcctagcactgctcccctgaacctg
cgggtgtcggacatcgagagcacccaggtgacgctgcactgggaccctgttgctcgcaac
agcctcatgggggagctcaaggagtacaaggtgtattactggagggacagcagccagctc
aggtggctgagcgtcagccgggccatgaagtccaaaggcttcccggccgtggacacagag
tacacgggtgtcctggatgagctgctaccctacagcaactacaagatgcacatcgtggta
gccaacaaccggtacgacgggccgcccagccataccatacagttctccacccccgaagga
gtcccatctgttcccaagtccttccggatccaacagagacatctggacaccatttatgtg
gactgggccttgccggctgagcccaacggcatcatcaccggctacacgctcaagtaccag
acagtgaacgccaccagaggagaggagatgcacgtggaggagttctactcaaacgtcacc
agtttctccgtgcgccgctacgaccgctacacccgctacagattctctctggcggccaag
actcaggtgggcctgggggagtggcacacggaggagtcggcccactacaccactgaagcc
tatgccactgaccaggtggacctctccaccaagggctggctgatcggcatcatgtgtgcc
gtggccatcatcgtgctcttcctcctcatcgtctgcttcatcaagaggagccggggaggg
aagtacccagtgcgggagaagaaagagatttcgttagagcctgtggatgacaaggaccag
gagggaacattcgactatcggtctctggaaaggatcgcacgtgtggtcactcttcctttc
ccccgacgggaggaggagcggggcctgcagcggggccaggcctcggtggagcccatcatg
aagcggacggagagcgacgacagcctggtggactacggcgacgtggagatccagttcaac
gaggacggctccttcatcggcgagtacacgggcaccagcaggaaggacgccgcgcgggac
gcccgcgacgtccgggacgagatggactacggcgggaacatggacctgcactccaccatg
aacgcaatctactccatggcctga
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integrated database retrieval system