KEGG   Gadus morhua (Atlantic cod): 115548187
Entry
115548187         CDS       T10832                                 
Name
(RefSeq) neurofascin-like isoform X1
  KO
K06757  neurofascin
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04514  Cell adhesion molecule (CAM) interaction
gmh04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    115548187
   04517 IgSF CAM signaling
    115548187
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:gmh04515]
    115548187
Cell adhesion molecules [BR:gmh04515]
 Immunoglobulin superfamily
  L1 family
   115548187
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 Bravo_FIGEY V-set FN3_DSCAM-DSCAML_C C2-set_2 Ig_6 Ig_PDGFR_d4 Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 115548187
NCBI-ProteinID: XP_030218498
Ensembl: ENSGMOG00000010281
LinkDB
Position
1:19132505..19146579
AA seq 1187 aa
MGTLVPAGLLLLAWHCIRALDIPLEIRQPPTIVTQSPKDHIVDPKDTMVIECEAKGNPQP
IFSWRRNGKYYNVARDPQASMRRRSGTLDIYAWKDPQEYEAEYQCIASNEHGSAYSNKIL
LRLSRPPLWPNEILEPVVVSVGFPLVLSCDPPRGPPRPETYWMSSCSFARPFSWPIQTAF
PTMQAVRQDRRVSTGINGDLYFSNVLFNDSHTDYCCNARLPHKHSIQQKRPVVVKVITTR
TVSEAAPTWLSPIRSSSSVLVLQGEELLLECIAAGVPTPHITWTKDGEKLVVKPGMRIKN
FNKMIHIPKASFDDIGEYVCSAANKIGYTERTIIVQVKAAPFWLEKPVDLVLAPEENGAL
VCRSDGIPRPTIRWFINGEALDTALPHPSRHMSGDTLSFRGVTMENTGVYQCNASNQFGY
LLANAYVNVLHATPRIIPPQEEHLKVVEGSNTFLECRYFGSPVPDLRWSKYGQGNLEGHR
FRTHSNGTLEIKQIRLEDTGTYMCIVTNIAGRDESQIRVEVKEPTLFVSRPQNLKVLRGS
DVTFECGVKADASTPVTTTWLKNKRPLSLNWRISLDESNLVITTVNSADDGEYTCSIKTE
MDEKSASARLMVMDRPNPPTNLQLSDPHERSVRLSWVPGDHNHSPITEYQVQYDEDDWLP
GKWRNLSTYPGNLNSVILQLTPYTYYEFRVIAVNAIGPSRPSRVSSRLQTGGAPPDVIPR
NIRGVGTWRNNMEISWEPLTYREWNGPYLKYLVWWKRKDSREEWKNATTKWLRYYIYDAD
TFTPYEIKVQAFNSFGLGPESKVIIGYSGEDRPSTAPLNLRVSDIESTQVTLHWDPVARN
SLMGELKEYKVYYWRDSSQLRWLSVSRAMKSKGFPAVDTEYTGVLDELLPYSNYKMHIVV
ANNRYDGPPSHTIQFSTPEGVPSVPKSFRIQQRHLDTIYVDWALPAEPNGIITGYTLKYQ
TVNATRGEEMHVEEFYSNVTSFSVRRYDRYTRYRFSLAAKTQVGLGEWHTEESAHYTTEA
YATDQVDLSTKGWLIGIMCAVAIIVLFLLIVCFIKRSRGGKYPVREKKEISLEPVDDKDQ
EGTFDYRSLERIARVVTLPFPRREEERGLQRGQASVEPIMKRTESDDSLVDYGDVEIQFN
EDGSFIGEYTGTSRKDAARDARDVRDEMDYGGNMDLHSTMNAIYSMA
NT seq 3564 nt   +upstreamnt  +downstreamnt
atggggacactggttccagcaggcctactgctattagcatggcactgcatacgtgccttg
gacatcccactggagatcagacaacctccaaccatagtgacgcagtcgccaaaggaccac
attgttgacccgaaggacaccatggtcatcgagtgtgaagctaaaggcaaccctcagccc
atcttctcgtggaggcgtaacgggaagtattacaacgtggcgcgtgaccctcaggcctcc
atgcgccggcgctccgggacgctggacatctacgcctggaaggacccgcaggagtatgag
gcggagtaccagtgcatcgcctccaacgaacacggctctgcgtactccaacaagatactg
ctgcggctttcaagacctccactgtggccaaatgagatcttggagccggtggtggtcagt
gtgggcttccccctggtcctctcctgcgaccccccgcgcgggccgcccagacccgagacc
tactggatgtccagctgctcgttcgctcggccgttctcctggcccatccagacggccttc
cccaccatgcaggctgtgcggcaggaccgccgggtctccaccggcattaacggggacctc
tacttctccaatgtgctctttaacgactcccacaccgactactgctgcaatgcccggctc
cctcacaaacacagcatccagcagaagaggcctgtggtggtcaaggtgatcacaactcgt
accgtatccgaggccgcccccacctggctgtcccccatcaggtcctccagctcagtcctg
gtcctgcagggggaggagctgctcctggagtgtatcgccgcaggagtgccgactcctcac
ataacctggaccaaagacggggagaaactagtggtgaagccaggaatgaggataaagaac
ttcaacaagatgatacatatccccaaggcctcctttgatgacatcggtgaatacgtctgt
tcagctgccaacaaaattggctacactgagcgaacgataattgtccaagtcaaagcggcc
ccattctggttggagaagccggttgacttggttttggcccctgaggagaatggagcccta
gtatgccggtctgacgggattccccggcctactattcggtggttcatcaacggcgaggca
ttagacactgccctcccccatcccagcaggcacatgtccggggacacactgagctttcgt
ggtgtgacgatggaaaacacgggtgtctatcaatgtaacgcctccaatcagtttggttac
ctacttgccaacgcctatgtcaatgtgctacacgcaaccccccggatcataccaccccag
gaagagcatctcaaggtggtggagggaagcaataccttcctggaatgccgatattttggt
tctccagtgcctgacttgcgatggagtaagtatgggcaggggaacctggaagggcaccgc
ttcaggacccacagtaatggcaccctggagatcaagcagatccgcttggaggacacgggg
acgtacatgtgcatcgtgaccaacatcgcgggcagggacgagagccagatcagagtagaa
gtgaaagagccaacgctgtttgtgagcagacctcagaacctgaaggtcctccgtggcagc
gacgtgacctttgagtgcggtgtgaaagcagacgcctccacccctgtcaccaccacctgg
ctgaagaacaagcggccgctctcgctgaactggaggatctccctagacgaatccaacctg
gtcatcaccaccgtgaacagtgcggatgacggcgaatacacctgcagcatcaagacagag
atggacgagaagtcggcctccgctcgcctcatggtgatggaccgccccaaccccccgacc
aacctgcagctgtcagacccccacgagcgcagcgtccggctcagctgggtgcccggggac
cacaaccacagccccatcacagagtaccaggtgcagtacgacgaggacgactggctgccc
ggcaagtggaggaacctgtccacctaccccgggaacctcaactcggtcatcctgcagctg
acgccctacacctactacgagttccgggtcatcgccgtcaacgccatcggacccagccgg
cccagcagggtgtcttcacgcctgcagacgggcggggcacccccggacgtcattcccagg
aacatccggggagtgggaacatggaggaacaacatggagatcagctgggagccgctgacg
taccgggagtggaacgggccctacctgaagtacctggtgtggtggaagaggaaggactcc
agagaggagtggaagaacgccaccaccaagtggctgagatactacatctacgacgccgac
accttcaccccctatgagatcaaggtccaggcgttcaacagcttcggtctgggacccgag
tccaaggtcatcatcggatactctggagaggaccggcctagcactgctcccctgaacctg
cgggtgtcggacatcgagagcacccaggtgacgctgcactgggaccctgttgctcgcaac
agcctcatgggggagctcaaggagtacaaggtgtattactggagggacagcagccagctc
aggtggctgagcgtcagccgggccatgaagtccaaaggcttcccggccgtggacacagag
tacacgggtgtcctggatgagctgctaccctacagcaactacaagatgcacatcgtggta
gccaacaaccggtacgacgggccgcccagccataccatacagttctccacccccgaagga
gtcccatctgttcccaagtccttccggatccaacagagacatctggacaccatttatgtg
gactgggccttgccggctgagcccaacggcatcatcaccggctacacgctcaagtaccag
acagtgaacgccaccagaggagaggagatgcacgtggaggagttctactcaaacgtcacc
agtttctccgtgcgccgctacgaccgctacacccgctacagattctctctggcggccaag
actcaggtgggcctgggggagtggcacacggaggagtcggcccactacaccactgaagcc
tatgccactgaccaggtggacctctccaccaagggctggctgatcggcatcatgtgtgcc
gtggccatcatcgtgctcttcctcctcatcgtctgcttcatcaagaggagccggggaggg
aagtacccagtgcgggagaagaaagagatttcgttagagcctgtggatgacaaggaccag
gagggaacattcgactatcggtctctggaaaggatcgcacgtgtggtcactcttcctttc
ccccgacgggaggaggagcggggcctgcagcggggccaggcctcggtggagcccatcatg
aagcggacggagagcgacgacagcctggtggactacggcgacgtggagatccagttcaac
gaggacggctccttcatcggcgagtacacgggcaccagcaggaaggacgccgcgcgggac
gcccgcgacgtccgggacgagatggactacggcgggaacatggacctgcactccaccatg
aacgcaatctactccatggcctga

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