Gadus morhua (Atlantic cod): 115548293
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Entry
115548293 CDS
T10832
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115548293 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115548293 (exosc4)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115548293 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
115548293 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115548293
NCBI-ProteinID:
XP_030218677
Ensembl:
ENSGMOG00000002113
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All DBs
Position
8:complement(5059452..5061650)
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AA seq
243 aa
AA seq
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MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG
SRNRTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKVLQADGGNYSVCVNAATLAIIDAGIPMRDYVCACTVGFVDETPLADLCFAEESG
SSLALALLPRGGQIALLQMDAQLHQDHLEALMDAAMTACKGVSKVLDEVVRRHLQEVSVL
TGE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacttgagctcctctcggaccagggataccgcctggatgggagaaaagccacc
gagctgcggaaagtgcaagcacgcatgggagtcttcgcccaggcggacggctctgcgtac
atagagcagggcaacaccaaggccctggcggtggtctacggaccccatgagatgcgaggc
tcccgcaatcgaaccctccacgaccgagctgtcatcaactgtcagtacagcatggccacc
ttcagcaccgcggagaggaagaggaggccgcacggagaccgcaagtcaacggagatgagc
ctccacctcaagcagacgtttgaggcggccgtgatgacccagctgtacccacgctcacag
atagacatctacgtcaaggtgctgcaagccgacggcggcaactacagcgtgtgcgtgaac
gcggccacgctggccatcatcgacgcgggcatccccatgcgggactacgtgtgcgcctgc
acggtgggcttcgtggacgagacgccgctggccgacctctgcttcgccgaggagagcggc
agctccctggccctggcgctgctgccccgcggcgggcagatcgccctgctgcagatggac
gcgcagcttcaccaggaccacctggaggccctcatggacgcggccatgacagcgtgcaaa
ggagtgagcaaggtgctggacgaggtggtgaggcggcacctgcaggaagtgtccgtgctc
accggagagtga
DBGET
integrated database retrieval system