KEGG   Gadus morhua (Atlantic cod): 115548293
Entry
115548293         CDS       T10832                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115548293 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115548293 (exosc4)
Messenger RNA biogenesis [BR:gmh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     115548293 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     115548293 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 115548293
NCBI-ProteinID: XP_030218677
Ensembl: ENSGMOG00000002113
LinkDB
Position
8:complement(5059452..5061650)
AA seq 243 aa
MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG
SRNRTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKVLQADGGNYSVCVNAATLAIIDAGIPMRDYVCACTVGFVDETPLADLCFAEESG
SSLALALLPRGGQIALLQMDAQLHQDHLEALMDAAMTACKGVSKVLDEVVRRHLQEVSVL
TGE
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcaggacttgagctcctctcggaccagggataccgcctggatgggagaaaagccacc
gagctgcggaaagtgcaagcacgcatgggagtcttcgcccaggcggacggctctgcgtac
atagagcagggcaacaccaaggccctggcggtggtctacggaccccatgagatgcgaggc
tcccgcaatcgaaccctccacgaccgagctgtcatcaactgtcagtacagcatggccacc
ttcagcaccgcggagaggaagaggaggccgcacggagaccgcaagtcaacggagatgagc
ctccacctcaagcagacgtttgaggcggccgtgatgacccagctgtacccacgctcacag
atagacatctacgtcaaggtgctgcaagccgacggcggcaactacagcgtgtgcgtgaac
gcggccacgctggccatcatcgacgcgggcatccccatgcgggactacgtgtgcgcctgc
acggtgggcttcgtggacgagacgccgctggccgacctctgcttcgccgaggagagcggc
agctccctggccctggcgctgctgccccgcggcgggcagatcgccctgctgcagatggac
gcgcagcttcaccaggaccacctggaggccctcatggacgcggccatgacagcgtgcaaa
ggagtgagcaaggtgctggacgaggtggtgaggcggcacctgcaggaagtgtccgtgctc
accggagagtga

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