Gadus morhua (Atlantic cod): 115548395
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Entry
115548395 CDS
T10832
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115548395
03012 Translation factors [BR:
gmh03012
]
115548395
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115548395
mRNA cycle factors
Stress granule specific factors
115548395
Translation factors [BR:
gmh03012
]
Eukaryotic type
Initiation factors
eIF-4
115548395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
RabGAP-TBC
INTS7_N
Motif
Other DBs
NCBI-GeneID:
115548395
NCBI-ProteinID:
XP_030218845
Ensembl:
ENSGMOG00000010339
LinkDB
All DBs
Position
8:6913097..6933937
Genome browser
AA seq
1852 aa
AA seq
DB search
MNKPPQPITGPVSVPHPAPSPGLTQAGYAPGQPPSLVFANPQLPQMNPAPQPRQFAAGPR
ALHQQGGYRALQPYYPNRPTMPTSAPRVQTSSGPRPVGPTHVYPAGSQMMMIPQQQISFP
GSPQGYFIPPGQYRPQYMAPTQQYPVTAGTAGFFPGTSPAEYPGFEPSHAARERRGGGGR
GGGRENGRLSLHGTALAPQRYPAGAYYPAQPQFTQSVQPAPVIISPAQQPQQAPPPQQPP
AQPQGPPKRERIPIRIRDPNQGGKDITEEIMSGGRATSTPTPPQASSDSPVLNGDVTQTI
VSGTDESTESAGSVETPPPASASPVPEVPLETVTPELVPAEPLTKPAVAAAVEAPPPLIE
EQKQQPPAPAVLPPPSPPPAAEPEPEAEVSDTVDAPVPPPAASAAKRRGAGPVAPPAAER
TPEKEEEKKPEVAKKSEPEKSTVAKLKKEPAAGPPAPVTPSSATGDEAASVPPVKAASAP
TVKASSAPPVKASSAPPVKASSAPPVKASSAPPVKASSAPPVKASSAPPVKASSAPPVKA
AVVPPVKAAVVPPPVKAAVVVPPVEAAVVVPPVKAAAVVPPVEAAVVPPVEAAVPPPVKA
AVVPPPEVKSAVVPPVKAAKAAPEPALEPQASTEETAASPSELPAAQAETPLSNGLAQGA
DEASEDLTPEVDTPLAKPVICQPPEASVADPAQEKEVEEAEEEEVEELTTETTEEASAAL
PAKDSTMQAAMSVPKKKRNMKELNKKATGDLLDAFKEEQAASPVPEPSPVQAEPAVAAPA
AAEKPASEAVDETWEEKEDKQNPKPVVPKTEPAEQKYQYKEENWKPINPEDKKQYDRDFL
LGCQFITASMHKPEGLPLINEVILDKANATPMRPADPARVMNVGPDFTPSYLGNLGSRQS
TGGPGPGPRGPVRGEPPGPRRSQQGQRKEPRKIIITSMSLNNEVQLNKAEKAWKPGVKKA
VGGRGAEEGAEEDDPEEVKTQELFKRVRSVLNKLTPQMFQALMKQVTDMSIDTEARLKGV
IDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDNPEATVNFRKLLLNRCQKEFEKDQDD
DVIFEKKQKELEASKDDEERDRLKVELQASKDKARRRSLGNIKFIGELFKLKMLTEAIMH
DCVVKLLKNHDEESLECLCRLLATIGKDLDFEKAKPRMEQYFAQLDKIIKERKTSSRIRF
MLLDVIDLRRCKWVPRRGEQGPKTIEQIHKDAEAEEHREQIKVQQQMLSKKDGGGGGGGG
GGGRMGGGGGGGNMGGRGHHAQGGGRGSQVQDEGWNTVPISKGNRPIDTTRFSKIINKPG
AQDVDDQRLAPGGRGFGNWTKGSSGGTGSKAPGAEQESGRPATSTVNRFSALQQSGPPSG
DADRRVPQRSSSSRDRGGERDRNDRGFDRFERREGRDGGGRPTITKRSFSRESQERGGDG
GRGPTEPVRRVSSMTDDRVRRDRAASKEPAVKPGRDATPPPAAASKPALSEEEMDKKSNA
IIEEYIHINDLKEALQCVSEMNSASLLFVFVRNGVESTLERSPGARAHLGHLMHQLIKAG
TLPPAQYYKGLQETLEMAEDMAIDVPHIWLYLAEQIVPMLQEGGIPMEQLFREISKPLVP
LGMAGVLLAQILTLLCKGMTHKKVGAMWNEAGLNWSEFLSKDVDVNKFVTEQHLEFTLDT
EGSEGPEKKPLTNEEISKQLERLIQDKAENQRIIDWVEANLDAQQSTGNSFVRALMTSVC
QSAIICDNLYKVDGKQISERGSLLLKYLSDEPKELQALYALQALMVHMEQPANLLRMFFD
NLYDEDVIKEETFYKWESSKDPAEQTGKGVALKSVTTFFTWLREAEEESDKE
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccaccgcagcctataacaggacccgtgtctgtcccacaccctgccccctcc
cctggactcacacaggctggctatgcccctggacagcccccttctctcgtttttgccaac
ccgcaacttccacaaatgaaccctgctccgcaaccaagacagtttgcggcagggccccgt
gctttacaccaacaggggggatacagagcactacagccttattatccaaaccggccgacg
atgcccaccagtgcccccagggtgcagaccagcagtggcccgcggcctgtgggacccact
catgtttaccctgccggctcacagatgatgatgattccccagcagcagatctcctttccc
ggctccccgcagggctatttcatcccccctggccagtatcgtcctcaatacatggctccc
acccaacagtaccctgtgacagccggcactgcaggcttcttccctgggactagccccgct
gaataccctggttttgaaccctctcatgctgcgcgggagaggcggggcggtggggggaga
ggtggcgggcgtgagaacggtcgtctctctctccatggcactgctctcgccccccagcgc
taccccgctggagcgtactatccagcacagcctcagttcactcagagtgtccagcctgcg
ccggtcataatcagtcccgcccagcaaccgcaacaagccccgcctcctcagcaacctcca
gcccagccacaaggcccgcctaagagggaacgtataccgatcagaatacgagaccctaac
cagggtgggaaggacatcacggaagagatcatgtcaggtggaagggccacttccacacca
acgccaccacaggcctcgtcagatagtcctgtcctgaatggtgacgttacacagactatt
gtttcaggaactgatgaaagtacggaatctgctggcagcgttgaaactccacctccagcc
tccgccagccccgtcccagaggtcccactggagacggtgaccccggagctagtgccggct
gaacccctcacgaagccggcggtggcggccgccgtcgaggccccccctccattgatagag
gagcaaaagcagcagccccccgctcccgctgtgctgcctccaccatcccccccgccggcc
gcagaacccgagccagaggccgaggtcagcgacacggtcgacgcccctgttccaccgccg
gccgcgtcggcagccaaacgccgcggggccgggcccgtcgctccgcccgccgccgagagg
acgccggagaaggaggaggagaagaaacctgaggtggcgaagaagtctgaaccggagaag
tcgaccgttgccaagctgaagaaggagcccgccgctgggcccccggcgccggtgacccct
tccagcgcgaccggcgacgaggcggcgagcgtccccccggtgaaggcggcgagcgccccc
acggtgaaggcctcgagcgcccccccggtgaaggcctcgagcgcccccccggtgaaggcc
tcgagcgcccccccggtgaaggcctcgagcgcccccccggtgaaggcctcgagcgccccc
ccggtgaaggcctcgagcgcccccccggtgaaggcctcgagcgcccccccggtgaaggcc
gcggtcgtccccccggtgaaggcagcggtggtcccccccccggtgaaggcagcggtggtc
gtccccccggtggaggctgcggtggtcgtccccccggtgaaggcagctgcggtcgtcccc
ccggtggaggctgcggtcgtccccccggtggaggctgcggtcccccccccggtgaaggct
gcggtggtccccccccccgaggtgaagtctgcggtcgtccccccggtgaaggctgcgaaa
gctgcccccgagcctgcgttggagccccaggcctccacggaggagaccgcggcctccccc
agcgagctgcccgccgcccaagcggagacgcctctctccaacggcctggctcagggagcc
gacgaggcctccgaggacctcactcccgaagtcgacacaccgctcgcaaagcctgtgatc
tgtcagcctccggaagcctctgtggcagaccctgcccaggagaaagaggtggaggaggcg
gaggaggaggaggtggaggagttgacgacggaaacgacagaggaagcctctgccgctctc
cccgccaaggattctactatgcaagccgccatgtctgtgccaaagaagaagagaaacatg
aaggagctaaacaaaaaggccactggagacctcctggatgccttcaaagaggaacaggcg
gcctcaccggtccctgaaccctcaccagttcaggctgagccagccgtggctgcccctgct
gccgctgagaagcctgcgtcagaggctgttgatgagacctgggaggagaaggaggacaag
cagaacccaaagccagttgtgcccaaaactgagccagctgagcagaagtaccagtacaaa
gaagagaactggaagcccatcaacccagaggacaagaagcagtacgacagggacttcctt
ctgggctgccagttcatcaccgccagcatgcacaaacctgaaggtctgccgctcatcaac
gaagtgatcctggacaaggccaatgcgacaccaatgcgccctgcagacccggcccgcgtg
atgaacgttggacccgactttaccccctcatacctgggtaaccttggcagtaggcagtcg
acgggtggaccgggacccggaccacgaggcccggtaagaggggagcctcccggcccgcgc
cgctcccagcagggccaacggaaggagcccaggaagatcatcatcaccagcatgtctctg
aacaacgaggtgcagctcaacaaggcggagaaggcctggaagcccggcgtgaagaaggcc
gtcggcggccgcggcgcggaggagggcgccgaggaggacgaccccgaggaggtcaagacc
caggagctgttcaagcgcgtgcgcagcgtgctcaacaagctgacgccgcagatgttccag
gcgctgatgaagcaggtgacggacatgtccatcgacaccgaggccaggctgaagggtgtc
atcgacctcatcttcgagaaggccatctcggagcccaacttctcggtggcctacgccaac
atgtgccggtgccttatggggctgaaagtccccaccacagataatccagaggccactgtc
aacttcagaaagctcctgctcaaccgctgccaaaaagagtttgaaaaggaccaagacgac
gacgttatctttgagaagaagcagaaggagttggaagcatctaaagacgacgaagagcgt
gaccgcctgaaggtggagctgcaggcttccaaagacaaggctcgccgtcggtcactgggc
aacatcaagttcatcggtgagctgttcaagctgaagatgctcaccgaggccatcatgcac
gactgtgtcgtgaagctgctgaagaatcacgacgaagagtctctggagtgcctctgcagg
cttctcgccaccatcggcaaagacctggactttgagaaggccaagccccgcatggagcag
tacttcgcccagttggacaaaatcatcaaggagcgaaagacctcctccagaatccgcttc
atgctgctggatgtcattgacctccgaaggtgcaagtgggtgcctcgcagaggggagcag
ggccccaaaaccatcgagcagatccacaaggatgctgaggcagaagagcacagggagcag
atcaaggtccagcagcagatgctttccaagaaggatggaggaggaggaggaggcggcggt
ggtggaggccggatgggaggcggcggcggcggcggcaatatgggaggccgaggacaccat
gcacagggaggcggccgtgggagtcaggtccaggacgagggctggaacacggtgcccatc
tccaagggcaacagacccatcgacacgacccgcttcagcaagatcatcaacaagcccggt
gctcaggacgttgacgaccagcggttggcccccggggggagaggtttcggtaactggacc
aagggcagcagtggagggacggggtcgaaagcccctggtgcagagcaggagtccggtcgc
ccggccaccagcactgtgaaccgcttctcggccctgcagcagtctggcccgccgtcaggc
gacgccgaccgcagagttcctcaaaggtcgagctccagccgcgaccgcggcggggagagg
gacagaaacgaccggggctttgaccgcttcgagcgccgggagggacgcgacggtggcggc
cggccgaccatcaccaagcgcagcttcagccgcgagtcgcaggagcgcggcggcgacggc
ggccgggggcccacggagcccgtgcgtcgcgtgtccagcatgaccgacgaccgggtcaga
cgggaccgtgccgccagcaaggagcctgcagtgaagcccgggcgtgacgcaacccctccc
cccgccgccgcctccaaaccggccttgagcgaggaggagatggataagaagtccaacgcc
atcatcgaggagtacatccacataaacgacttgaaggaggcgctgcagtgcgtgtccgag
atgaacagtgcctcgctgctgtttgtgttcgtccggaacggcgtggagtcgacgctggag
cgcagccccggggccagggcccacctgggccacctgatgcatcagctcatcaaggctgga
acactgcccccagcgcagtactacaaagggcttcaggagaccctggagatggccgaggac
atggccatagacgtccctcacatctggctgtacctggcggagcagatcgtcccgatgctg
caggagggagggatccccatggagcagctcttcagggaaatctccaagcctctagtgcct
ttgggaatggccggcgttctgctggcacagattctcactttgctctgcaaaggaatgacc
cacaaaaaggtcggggccatgtggaacgaggcaggcctgaactggagcgagttcttgtcc
aaggatgtggacgtcaacaagtttgtgactgagcagcacctggagttcaccttggacacc
gaggggtctgaggggccggagaagaagcccctgaccaacgaggagatcagcaagcagctg
gaaaggctcatccaggacaaggccgagaaccagcggatcatcgactgggtggaggctaac
ttggacgcgcagcaatccaccggcaactcgtttgtgcgagcgctgatgacgtccgtgtgc
cagtccgccatcatttgcgacaacctctacaaggtggacgggaagcagatcagcgagagg
ggaagcctgctgctgaagtacctgagcgacgagcccaaagagctccaggctctctacgcc
ctgcaggccctcatggtgcacatggagcagcctgcaaacctgctgcggatgttcttcgac
aacctgtacgacgaggacgtcatcaaagaggagaccttctacaagtgggagtccagcaag
gaccccgcagagcagaccggcaagggtgtggcgctcaagtctgtcaccaccttcttcacc
tggctccgtgaggcagaggaggagtccgacaaagaataa
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integrated database retrieval system
