Gadus morhua (Atlantic cod): 115548537
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Entry
115548537 CDS
T10832
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115548537
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
115548537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR55
WD40_Gbeta
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
HIRA_B
NBCH_WD40
Tricorn_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
115548537
NCBI-ProteinID:
XP_030219115
Ensembl:
ENSGMOG00000009104
LinkDB
All DBs
Position
8:27186012..27226954
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AA seq
1008 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREDDEKKEHIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAALIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVSCLRGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTVDWQMETDITKPFSECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWRTNMDFVGHRKAVTVVKFNPKIFKKKQKSSSCPYCCCAVGSK
DRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGILVCSMDGTVAYLDFSQDELGDP
LNEDEKNTIHQNIYGKSLAITSTEQLSNTVIENPEMLKYQQERSAAAATAQSSAHAAAEQ
ATPKLTSVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFNSVPI
MPGAAVPNQLTPQLSSDSSQGQATSLGLRPPHDPLLASCAPSGSAKPLEENKEGYKASLL
LGSASKIEPMKALDSRFTERSKATPGVTSAITSITGMTPLDGRLKDSVSTLKSKDESSSD
SEDKTANINKNLSFTKRKAELMMEGGEVVEKRKKGRPRKDKMAVSMAPPFPQATPPSDRD
TGRVTMSPAAVLKLPTPSLQKSFSLQVSTEPSVFLEVENEVSQVAGSKLSQIRCSRDGRD
WDTLLPCSILTATGSSDVIAVACEDRMLSVFSSCGRRLLPAMQLATAPSALHCSGHYVMV
LTSGGAVFVWDVQKQTATVKNQSLQTIIPVGDITVSQTLLTQQGVPVVALTNGKSYCFSS
ALDTWALIADKADSLVQCADFRSCLTTHDAPVPSGPLAVMQGRNLNGGRLVSRLSTAPHQ
LQQSLTSSFLECQLASARVLLSPQEYRYWLLIYARFLVTEGSEYRLRELCKELLGPVHKS
AASSWEPTTLGLHKRDLLREVLPVIGQNLRFQRIFTEYQDQLELVRSK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttctgaagccgagctgggtcagccacaacggaaaaccaatattttccgtcgac
atacatccggatggaacaaagtttgcgaccggtggacaaggagaggattctggaaaggtg
atgatctggaacatggcccccgtcctgagagaggacgatgagaagaaagaacacatccca
aagatgctttgccaaatggacaatcacctggcatgtgtgaactgcgtgcgctggtctaac
aacggcctgtacctggcatctgggggagatgacaagctggtcatggtgtggaagcgagca
gcgttaatcggtcccagcacggtgttcgggtccagcagtaagttggccaatgtggagcaa
tggaggtgtgtcacgatcctaaggaaccatactggagatgtgatggatgtggcctggtct
cctcatgatgtgtggctggcgtcctgcagcgtggacaacaccatcgtcatctggaacgca
cgcaagttcccagagatggtgagctgcctgcggggccacactgggctggtgaagggcctg
acctgggacccggtggggaaatacattgcgtcgcaggcggacgaccacagcctgaaggtc
tggcggacggtggactggcagatggagacggacatcaccaaacccttcagcgagtgcggg
gggaccacccatgtcctgcgtctgtcctggtctccagacggtcagtacctggtctcggcc
cacgccatgaacaactctggacccacagcgcagatcgtggagcgtgacggctggaggacc
aacatggactttgtgggccacaggaaggctgtcaccgtagtgaagttcaatcccaagatc
tttaagaagaagcagaagagcagcagctgtccgtactgctgctgtgccgtgggcagcaaa
gaccggtccctctccgtctggctgacgtctctcaagcgtcctttagtggtgatccatgac
ctcttcgataaatccatcatggatatctcctggactcttacagggctggggatcctggtg
tgttctatggatggtaccgtggcctatctggacttctctcaggatgagctgggtgacccc
ctcaacgaggacgagaagaacaccatccaccagaacatctatggtaagagcctggccatc
accagcacggagcagctctccaacaccgtcattgagaacccagagatgttgaagtaccag
caggaacgcagcgccgctgccgccactgcccagagctccgcccacgcggccgccgagcag
gcgacgcccaagctcaccagtgtggtcaacggcgagtccctggaggacatcaggaagaac
cttctgaagaagcaagtggagacgaggactgccgacgggaggcgacgcatcacccccctc
tgtatagcgcagctggacacaggggacttctcgcccgccctcttcaacagtgttcccatc
atgcccggggccgctgtccccaaccagttgaccccccagctgagctctgactccagccag
ggacaggctacctccctggggttgaggccacctcacgaccccctgcttgcatcctgtgcc
cccagcggctccgccaagcccctggaggagaacaaggaaggatataaggcaagtctcctg
cttggctctgcctctaagatagaacccatgaaagctctcgactcgaggttcaccgagagg
tcaaaggccacaccaggggtcacctccgccatcacctccataacgggcatgacaccgcta
gatggcaggttgaaggacagtgtctctaccctgaagtctaaagacgagtcgagcagcgac
agtgaggacaagacggccaacatcaacaagaacctgtccttcaccaagcgcaaggcagag
ctgatgatggaagggggcgaggtggtggagaagaggaagaaagggcggccccggaaagac
aagatggctgtctctatggcaccgcccttcccccaggccactcccccctccgaccgagac
acaggcagggtcaccatgtctcctgctgccgttttaaaactcccaacccccagcctacag
aagagcttcagcctccaggtgagtacggagccctctgtcttcctggaggtggagaacgag
gtctcacaggttgctggttcgaagctcagccagatcagatgttccagagatgggagagac
tgggacacactgctgccttgctcaatcctcactgccactggcagcagtgatgtcatcgct
gtggcgtgcgaggacaggatgttgtctgttttctcttcatgtgggcgccgcctacttcct
gccatgcagctagccacggccccctctgccctgcactgctccgggcattatgtcatggtg
ctgacatcagggggagcggttttcgtctgggacgtccagaagcagacggcaacggtgaag
aaccaatcgctgcagaccatcatcccagttggtgacatcaccgtctcccagactctgctg
acccagcagggggtaccggtggtggctctgaccaacgggaagtcctactgcttcagctcg
gccctggacacatgggctctgatagcagataaagccgactcattggttcagtgtgctgac
ttcaggagctgtctgactacccatgacgcacctgttccttctggaccactggcggtcatg
cagggtcgtaacctcaatgggggtcgtctggtctcccgtctctccaccgctccccaccag
ctccagcagtccctcacctcctccttcctggagtgccagctggcctccgcccgtgttctg
ctatccccccaggagtaccgctactggctgctcatctatgcccgcttcctcgtcacagag
ggttctgagtaccgtctccgagagctgtgtaaggagctgctgggacctgtccacaaatca
gctgcttcctcctgggagcccaccactctgggactccacaagcgggatctactgcgggag
gtgttgccggtcatcggccagaacctccgcttccagagaatcttcacagagtaccaggac
cagctggagctggtccgaagcaaatga
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