Gadus morhua (Atlantic cod): 115548542
Help
Entry
115548542 CDS
T10832
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115548542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115548542
Transporters [BR:
gmh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115548542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
Motif
Other DBs
NCBI-GeneID:
115548542
NCBI-ProteinID:
XP_030219124
Ensembl:
ENSGMOG00000012417
LinkDB
All DBs
Position
8:complement(10803615..10856104)
Genome browser
AA seq
2330 aa
AA seq
DB search
MNTGSQIRLLLWKNWTLRKRQKIRFLVEILWPVMLFIGLVWLRKANPLYRQHECHFPNKA
MPSTGILPWIQGIFCNVNNPCFRYPTRGESPGIVSNYNNCIFARFYADAQELLLNDEETQ
QLGQIWREMASFSNFMEALRNNPHSVSGRGLRLDDILKDDENFTAFLLRDASLSDSVVHE
LINAEIRLENFAFGIPDLQLKDIACSQVLLERFILFHSRRGLFSVRNAMCALSQQRLQKI
EDILYSNLDFFKIFRLMPRVMDRNAQGIDLHFWGRVLSTVSEKIQELMERSSSQDLLKAL
QPLVRSGGPASFSELTSLLSSLVCGYPEGGGSRVLSFNWYEDNNYKVFLGVNGSKSRDYR
YDATTTPFCNDLMQTLESNPITKIVWNSVKPLVMGKVLYTPDSPATRKILKSANGTFEEL
ERLQILAKAWEELGPQIWTFLHSSVQMNMIRDTLRNPTVMDFLDRRLEDTAFSTKDILNF
LYSGPAYKREEGMEDFDWRNVFNLVDPLIRTFNQYSECINLDKFVPLTDESQVIHQALFL
LEKNKFWAGVVFMDMYPWTSSVPPHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPMEDQ
RYIWGGFSYLQDMIEHGILRLHTGNDWPLGVYIQQMPYPCYVDDLFMITLNRCFPIFMVL
AWIYSVSMTVKSIVLEKELRLRETLKAMGVANGVIWYTWFIDSFIMMTASTALLTAIIMG
GKVLNYSDPLLVFLFLLTFTLATIMQCFLLSVFFNKANLAAACSGIIYFTLYLPHLLCSA
WQDRITRPMKLAASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIQSSPLEGDSYSFMTSVG
MMLLDAVLYGVLAWYLDNVFPGQYGIGRPFYFLFQPSYWSKPDPQVPDTAYDIPERPEAE
AAAGEEEQQEKDVESLGHPETLHCNGSASRHTCKHQDKRERLERQREQLRRQQQEEENPE
QQPTDQQGGAGQLFFEPEPVGLVRGVQIQDLVKVYKGCSRPAVDGLTIAFYEGQITSFLG
HNGAGKTTTMSILTGLYPPTSGTAFINGRDIRTEMDEIRTSLGMCPQHNILYNHLTVEEH
ILFYSMLKGRSQDEAQAEVESMLEDLELPHKRDDEAQDLSGGMQRKLSVAMAFVGGSKIV
ILDEPTSGVDPYSRRSIWELLLKYRNGRTVILSTHHMDEADLLSDRVAILSQGRLHCCGS
PLFLKNYFGVGFYLTLVRRMRDLRRKENDCDCASDCSCACSLCTKYKDDSQNLSQHIDRA
LDGDIDSITSLIHHHVPEAKLIESIGQELTYLLPSKGFKHRAYASLFRELEETLGDMGLS
SFGISDTSLEEIFIKVTSDGEAASNGKTPEQWMLRQRKSSNKCAAEVVEEANGEAQDNGG
SCGPSDSNEGRGSRQVKGCRLVLKQFHALLVKRFHHAVRCKKDFLAQVVLPASFVLIALV
FTTIVPPFGEYPGLTLSPWLYGEQFTFFSNERPFDPKMKRFTESMLASPGLGTRCLEGEP
LSMPCGDTSVWAYPAVSPLVSNILLSPEWHEGNPSPTCQCSEGKRLTMMPTCPLGAGGTP
PRQRREATGDVLLDLTGHNISDYLVKTYPGLIRTSLKSKYWVNEQRYGGLSVGGQLPILD
LDPTELQNTLKQVGRMLNITGGTYSKRALKDIGPFLRYMESEFNIKVWYNNKGWHAMASF
MNVANNAILRAFLPSSANPVEYGITAVNHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQERATKAKHLQFVSGVSPLVYWVANFFWDMVNYSLSTAMVVGIFMAFD
KKCYTSPTNLPALITLLLLYGWSVTPMMYPMSYVFSVPSTAYVSLACINLFIGINSSAIT
FILELFENNRSLLTFNEWLKKVLLLFPHFCLGRGLIDMAMNQAVTDVYARFGEEYTMDPF
RWDFVGKNVTFMAVEGFVFFLLNLLIQYRFFLDHWLSDRQRPPIQDEDEDVAEERKRIYE
GGSRGDILYIKDLCKTYVGRKRAAVDRICVGVPPGECFGLLGVNGAGKTTTFKMLTGDSD
VSAGEATVLGYSILSDILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPESEIPRV
AAWGIQKLGLTEYAGRCAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLW
NAIMSVIQDGRAVVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGDGYVVTMK
VRSSGPGAPPDLGPAESFMESSFAGCVQREKHYNTLQYEIASSSLARIFQLVAANKERLS
IEDYSVTQTTLDQVFVNFAKLQAGEDDDVISRRRKASTHKRKITPLRRKK
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaggcagtcaaatccgcctgttgctatggaaaaactggactctacgcaagaga
cagaagatccgcttcctggtggagattctgtggcctgtgatgttgtttatcggtctggtg
tggctgcgtaaggccaacccactgtacaggcaacatgagtgtcacttccccaacaaggcc
atgccctcgacggggattctcccctggatccaagggatcttctgcaacgtcaacaacccc
tgtttcagatatcccaccaggggagagtcccctggaatcgtctccaactacaacaactgc
atatttgctcgattctatgctgatgcccaggagctgctgctaaacgatgaggagacccag
cagctagggcagatctggagagaaatggcctccttctctaacttcatggaggctctgcgc
aacaacccacattcggtctcaggtcgcggactgaggctagacgacattctgaaggacgac
gagaacttcacggccttcctgttgcgagacgccagcctctcagactctgtggttcacgag
ctgatcaatgcagaaatacgactggaaaattttgccttcggcatccccgacctgcagctg
aaggacatcgcctgcagccaggtcctgctggaacgcttcatcctcttccacagccgccgg
ggcctgttctccgtgcgcaacgccatgtgcgctctctcccagcagaggctgcagaagatc
gaggacatcctctattccaatctggacttcttcaagatcttccgattgatgcctcgggta
atggatcgcaatgcccaggggattgacctgcacttctggggtcgagtccttagcactgtg
tctgagaaaatacaagagctgatggagaggagcagctcccaggacctcctgaaggccctg
cagcccctggtgcgctccggggggccggcctccttcagcgagctgacctccctgctgtcc
tccctggtgtgcggctacccggagggggggggctcccgcgtgctctccttcaactggtac
gaggacaacaactacaaggtgttcctgggggtcaacggcagcaagagccgcgactaccgc
tacgacgccaccaccactcccttctgcaacgacctgatgcagacactggagtccaacccg
atcaccaagatagtgtggaattcagtgaagcccctggtgatgggaaaggtcctgtacacc
cccgactcccccgccacccgcaagatattaaagagtgccaacggtacgtttgaggagctg
gagcgtctgcagatcttggccaaggcctgggaggagctgggtcctcagatctggaccttc
ctccacagcagcgtccagatgaacatgatcagggacaccttaaggaaccccaccgtcatg
gacttcctggacaggcgtctggaggacacagcgttttccaccaaagacatcctgaacttc
ctgtacagcgggcccgcctacaagcgggaggagggcatggaagacttcgactggaggaat
gtgttcaacctagtggacccgctcatacgcacgttcaaccagtactctgagtgcatcaac
ctggacaagttcgtccccctgacggacgagtcccaggtcatccaccaggccctgttcctg
ctggagaagaacaagttctgggcgggggtggtcttcatggacatgtacccctggacctcc
agcgtaccgccgcatgtcaagtacaagatccgcatggacatcgacgcggtggagcgcacc
aacaagatcaaggacaggtactgggacccgggtcccagggcagacccgatggaggaccag
aggtacatctgggggggcttctcctacctgcaggacatgatagagcacggcatcctcagg
ctccacacgggcaacgactggcccctaggggtctacatccagcagatgccctacccgtgc
tacgtcgacgacctcttcatgatcacactgaaccgatgcttccccatcttcatggtgctg
gcctggatctactcggtgtccatgacggtgaagagcatcgtgctggagaaggagctccgc
ctccgcgagaccctgaaggccatgggcgtggccaacggggtcatctggtacacctggttc
atcgacagcttcatcatgatgaccgccagcactgcgctgctcaccgccatcatcatgggc
ggcaaggtgctgaactacagcgaccccctgctggtgttcctcttcctgctgaccttcacg
ctggccaccatcatgcagtgcttcctgctcagcgtcttcttcaacaaggccaacctggcg
gcggcctgcagcggcatcatctacttcaccctctacctgccccacctgctgtgctccgcc
tggcaggaccgcatcacccgccccatgaagctggccgccagtctcctgtcccccgtggcc
ttcggcttcgggacagagtacctgtcccgctacgaggagcagggcctgggcctgcagtgg
gacaacatccagagcagccccctagagggggactcctactccttcatgacctccgtgggc
atgatgctgctggacgccgtgctgtacggcgtgctggcctggtaccttgacaacgtcttc
ccaggtcaatatggaatcggtcgaccgttctacttcctgttccagccctcatactggagc
aaacctgacccacaggtcccagatacggcttatgacatccccgagaggccagaggctgag
gcggcggcgggtgaggaggagcagcaggagaaggatgtggagagcctgggccacccagag
accttacactgcaacggctcggccagccggcacacctgcaagcaccaggacaagagggag
cggctggagaggcagagggagcagctcagacgacagcagcaggaggaggagaacccggag
cagcagccgactgaccagcagggcggcgccggccagctgttctttgagcccgagccggtg
ggtcttgtgaggggggtgcagatccaggacctggtcaaggtgtacaagggctgctctcgt
cccgccgtcgacggcctcaccatcgcattctacgagggccagatcacctccttcctgggg
cacaacggcgccggcaagaccaccaccatgtccatcctgaccggcctctacccccccacc
tcgggcacggccttcatcaacggacgggacatccggacggagatggatgagatccggacc
tccctgggcatgtgccctcagcacaacatcctctacaaccacctcaccgtggaggagcac
atcctgttctactccatgctgaagggccgctcccaggacgaggcgcaggcggaggtggag
agcatgctggaggacctggagctgccccacaagcgggacgacgaggcccaggacctctcg
ggcggtatgcagaggaagctgtctgttgccatggcgtttgttggagggtccaagatagtg
atcctggatgagcccacgtcgggggtggacccctactcaagacgctccatctgggaactg
ctgctcaagtaccgaaacggccgcacggtgatcctgtccacgcaccacatggacgaggcc
gacctgctgagcgaccgcgtggccatcctgtcccagggccggctccactgctgcggctcc
ccgctcttcctcaagaactactttggcgtgggcttctacctcacgctggtgcgccgcatg
agggacctccggcggaaggagaacgactgtgactgtgcgtcagattgttcgtgtgcttgc
tccctctgcaccaagtataaggatgactcccagaacctctcccagcacatagacagagcc
ctggacggggacatcgacagcatcaccagcctgatccaccaccacgtcccggaggccaag
ctgatcgagagcatcggccaggagctcacctacctactgcccagcaagggcttcaagcac
cgggcgtacgccagcctcttccgggagctggaggagaccctgggagacatgggcctcagc
agcttcggcatctctgacacctcgctggaggagatattcataaaggtcacttcggacgga
gaggcagcgagcaacggaaagactccagagcagtggatgttacgtcaacggaagagtagc
aacaaatgtgctgcagaggtcgtggaagaagccaatggggaggctcaggacaacgggggc
tcctgcgggccctctgacagcaacgaggggcggggctccagacaggtgaaaggctgcagg
ctggtcctgaagcagttccatgccctgctggtgaagaggttccaccatgccgtgcgctgt
aagaaggacttcctggcacaggtggtcctcccagccagcttcgtgctgatagcgttggtc
ttcaccaccatcgtacccccgttcggagagtacccgggactcaccctcagcccctggctg
tacggagagcagttcaccttcttcagtaatgagcggccgttcgatcccaagatgaagcgc
ttcacagagagcatgctggctagcccggggctgggcactcgctgcctggagggagagcct
ctcagcatgccgtgcggcgacacctcggtgtgggcctacccggccgtctccccgttggtc
agcaacatcctgctgagccccgagtggcacgaggggaacccctccccgacctgccagtgc
agcgagggcaagaggctgaccatgatgcccacgtgtcccctgggggccgggggcacgccc
ccccgccaacgcagggaggccacgggggacgtcctgctggacctgaccgggcacaacata
tcagactacctggtcaagacctaccccggcctcatccgaaccagtttgaagagcaagtac
tgggtgaacgaacaaagatacggaggtttgtccgttggtggacagctcccaatcttggac
ttggaccccacagaacttcagaacaccttgaagcaagtgggccggatgctgaacatcaca
gggggtacctattctaaacgcgctctgaaggatatcgggccgttcctgcgctatatggag
agtgaattcaatataaaggtgtggtacaacaacaagggctggcacgccatggcgtccttc
atgaacgtggccaacaacgccatcctcagggccttcctgccctcctcggccaaccccgtg
gagtacggcatcaccgccgtcaaccacccgctcaacctcaccaaggagcagctgtccgag
gtcaccgtgctgaccacgtcggtggacgcggtggtggccatctgcgtcatcttcgccatg
tccttcatcccggccagcttcgtcctctacctcatccaggagcgtgccaccaaggccaaa
cacctgcagttcgtcagcggagtcagcccgctggtctactgggtggccaacttcttctgg
gacatggtcaactattctctgagcacagccatggtcgtgggcattttcatggctttcgac
aaaaagtgctacacctcccccaccaacctgcccgccctgataacactgctgctgttatac
gggtggtcagtgacccccatgatgtaccccatgtcctacgtgttcagtgtgcccagcacg
gcctacgtctcgctcgcctgcatcaacctcttcatcggcatcaacagcagcgccatcacc
ttcatcctggagctctttgaaaacaacaggtctttgctgacattcaacgagtggctgaag
aaggtgctgctgctgttccctcacttttgcctgggccgggggctcatagacatggccatg
aaccaggccgtcaccgacgtctacgccagattcggagaggagtacacaatggacccgttc
cgctgggactttgtggggaagaatgtgactttcatggctgtggagggctttgtcttcttc
ctgctaaatctccttatccagtaccgcttcttcctcgaccactggttgtccgaccgccag
cgacctcccatccaagacgaggatgaggacgtggcggaggagaggaagaggatctacgag
ggagggagcaggggggacatcctgtacatcaaggacctctgcaagacgtacgtgggcaga
aagagggcagcggtggaccggatatgtgtgggcgtccctccaggagagtgctttggcctg
ttgggggttaatggtgcaggcaagacgaccaccttcaaaatgctgactggagactcagac
gtgagtgcgggggaggccactgtgttgggctacagcatcctgtcggacatcctggacgtg
caccagaacatgggctactgcccgcagttcgacgccatcgacgagctgctgacgggccgg
gagcacctgtacctctacgcccgcctgcggggggtccctgagtcggagatccccagggtg
gcggcgtggggcatccagaagctggggctgacggagtacgcaggccgctgcgcaggcacc
tacagcgggggcaacaagcgcaagctctccaccgccatcgccatgattggctgcccggcg
ctggtgctgctggatgagcccaccacaggcatggacccccactcccgccgcttcctgtgg
aacgccatcatgagcgtcatccaggatgggagggccgtggtgctcacctcacacagcatg
gaagagtgtgaggcgctctgcactcgactggccatcatggtgaacgggaccttcaaatgt
ctgggcaccatccagcatctcaaatacaagttcggggacggctacgtggtgaccatgaag
gtcaggtcgtcgggccccggggcccccccggacctgggccccgccgagagcttcatggag
agcagcttcgcgggctgcgtgcagcgggagaagcactacaacacgctgcagtacgagatc
gcctcctcgtccctggcgcgcatcttccagctcgtggcggccaacaaggagcgcctcagc
atcgaggactactcggtgacccagaccacgctcgaccaggtgtttgtgaacttcgccaag
ctgcaggcgggagaggacgatgacgtcatctcacgtcgacgcaaagctagcacgcacaaa
agaaagatcacaccgctccggagaaagaaatga
DBGET
integrated database retrieval system
