Gadus morhua (Atlantic cod): 115548552
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Entry
115548552 CDS
T10832
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115548552 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
115548552
NCBI-ProteinID:
XP_030219147
Ensembl:
ENSGMOG00000018566
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Position
8:2285779..2298427
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AA seq
702 aa
AA seq
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MDLISTKWIIHLLLCGLFYGVSCNSVEQKIYINLNDTVPCVRLLNATHQIGCQSSLGGDV
GVIHFLESEQNLEYVLTTGNNPPYMVILESHLFNRDVMMKLKNGSSRIAGVAVIKPNSNP
VGAFSPHTTCPNENTGVYSESYDPALAHCNGTMWNPNGNGLSYEEFSFPIFSLKDDNGTE
VIRQCYMDHNRAVNGSVPVYPLCAMELSSHMSAVTDTVTCMRRSDTSGLSLNPEQVCDPL
GNYNVWGATKGLNNSASGHSENETVVIAAARLDSRAFFHGISLGADSGTSGFITLLAAAG
ALANVTREAPPPRTILYAFFQGESFDYIGSSRMVYDMQGDKFPIDLDNIHSLVEIGQVGL
HASEGLWVHTDPVSRRNASIETEVKNLTDIFRSVATSLNISLGEPDVSQPLPPASFQRFL
RAQPIPGVVLTDHRTSFTNSFFESMYDNAEYLNLTFPAGLTPEEQFNYVTDTAKGLAKVA
TLAARTLYRQAGGAEERLAGINADELTVAHMLYGFLIQTKNPWFEAIVSPEDLPALRAFP
PEHYVGVNFNSNSSTKLVSYVFINLTGTAVNVSRENCSSSGKFEDAADSTDMNSYTWVRG
VTPPNATEPAGYCVRSTTRLARAESPAFLLGEFNSSTYSTWSESRWKKINARIFLVAGHD
LEMLTLGVGLAVLLVSLLITFFVNAKADFLFSSGREPANATY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggatttgatatcaaccaaatggattatacatttgttactttgtggtcttttttatggt
gtgagctgtaattcggttgaacagaaaatctacatcaatctcaacgacactgtgccgtgt
gtcaggttgctcaatgcgacgcatcaaataggctgccagtcctccctaggtggggacgtg
ggggtgatccactttttggagtcggagcagaatttagaatatgtcctgaccactggaaac
aatcctccatatatggtcatcctggaatctcatcttttcaacagggatgtcatgatgaag
ctgaaaaacggctccagtcgcattgccggcgttgccgtgataaagcccaactcaaatcca
gttggggccttctctccacacaccacctgccccaatgagaacacaggtgtctactctgag
agctacgaccccgccctggctcactgcaacgggacgatgtggaacccgaatgggaacggc
ctctcctacgaggagttcagcttccccatcttctccctgaaggacgacaacggcactgag
gtcatacggcagtgctacatggaccacaaccgggcggtgaacggcagcgtgcccgtctac
ccgctgtgtgccatggagctctcctcccacatgagcgccgtcaccgacacggtcacctgc
atgcggcggagcgacaccagtgggttgagcctcaacccggagcaagtgtgcgacccgctg
gggaactacaacgtgtggggcgccaccaagggcctgaacaactccgccagcgggcacagc
gagaacgagacggtcgtcatcgccgccgccaggctggacagccgggcattcttccacggc
atcagcctgggcgcggacagcggcacgtcgggcttcatcacgctgctcgccgccgccggg
gcgctcgccaacgtcacccgggaggcccccccgccacgcaccatcctctacgccttcttc
cagggggaatccttcgactacatcggcagctcgcggatggtgtacgacatgcagggagat
aaattccccattgacctggacaacattcactctcttgtggagattggacaggtgggcctt
cacgccagcgaaggtttgtgggtccatactgaccccgtctccaggaggaacgccagtatt
gaaacagaggtgaagaacctcactgacatcttcaggtcggtcgccaccagcctgaacatc
tcattgggtgagcctgatgtctctcagccccttcctcccgcctctttccagcgcttcctt
cgagctcagccaatccctggcgtcgtcctcaccgatcaccgcaccagcttcacaaacagc
ttcttcgagagcatgtacgataacgccgagtacctcaacctgacgttcccagccgggctg
acccccgaggagcagttcaactacgtcacagacactgccaagggtctggcgaaggtggcc
accctggcggcgcgaaccctgtaccggcaggcgggcggcgccgaagagaggctggcgggc
atcaacgcggacgagctgacggtggctcacatgctttacggattcctgatccagaccaaa
aacccctggttcgaagccatagttagccctgaagatctgccagcactgagggcttttccc
ccggagcattacgtgggggtgaactttaactccaacagctccaccaaactggtgagctac
gtgttcatcaacctcacgggcacggccgtcaacgtcagcagggagaactgcagcagctcc
ggcaagttcgaggacgcggcggacagcacagacatgaactcgtacacctgggtgcgaggc
gtgacccccccgaacgccacagagccggcagggtactgcgtccgctctacgacgagactc
gcccgggcagagtccccggccttcctgctcggagagttcaactcgtccacctactcgacg
tggagcgagtcgcgctggaagaaaatcaacgcgcgcatcttcctggtggccggccacgac
ctggagatgctgaccctgggcgtgggcttggccgtgctgctcgtctccctcctgatcacc
ttcttcgtcaacgccaaggccgacttcctgttcagctccggccgcgagccagccaacgcc
acctactga
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