Gadus morhua (Atlantic cod): 115548593
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Entry
115548593 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115548593
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
115548593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-C2H2_6
zf-H2C2_5
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
115548593
NCBI-ProteinID:
XP_030219203
Ensembl:
ENSGMOG00000023916
LinkDB
All DBs
Position
8:3098570..3149922
Genome browser
AA seq
1081 aa
AA seq
DB search
MADGLRCKRRKQANPRRNSVTSFNNGLEASSDSDDEDKLHIVEEESLQEPDATANATAAA
AAVANGDKATPTDASQDASAVLAHNGSWNGVNGEGGSEEEEDMEEEEEAEGEEEETKKIL
QQGDTAVIYPEAPEEECTTPDRGGADENGLPDTFSQLHICPYCSRGYKRNASLKEHIKYR
HETSDDNFSCSQCSYTFTYRSQLERHMSHHKGSREQRHVTPATGGNRKFKCNECAKAFKY
KHHLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCVGARPTDGSPRTAIKPAPP
APPTPAPAANAAAAGTPVRVLLKEKSDSKPLQEQLPLTQIKSEPVEYECKPATVTAAVAA
ATTTPSPTTTTTTTTTAAAAAATTTLPHGLAMVVPTVGLMSPISINLGDLQSVLKVAMDG
NVLRQVLGSASGLVMHGKQGLLLQQPHQQIISLPAFVDQDGNTKIIINYSINPAPNAAAA
VQTHPLLLKREPPAAAAAAPVLLTANATTAAATAGATDVSLVKTEPASPPASPAPAAAAA
DGEATAAAPAKGTPCAPCAEDDDGAKALLALRGDGEGKEGGGASLDPSFAALLSEAGVTL
EEMNSGRKGAAAEGPVAAAADPTGAATADGLSAPPPASPRAETTSRGDDDAAAAAVKSEP
RDPERPEDAQAEPLDLSLPKQGGEGSEGPGGTPPPPPAKTQEQPLNLTCLRKSPAGTFYV
TAAQASGIVAGGQLPTLVAIAGHQGTVSCLRAINTTTKRTILIPQLTYTYTTAAGGTGAK
TVLLNGHKPQERRADSGSEGTSAVEEQNDSDSASPSKKRRLENGVYPCDLCSKVFQKGSS
LLRHKYEHTGKRPYECHVCHKAFKHKHHLIEHSRLHSGEKPYACDKCGKRFSHSGSYSQH
MNHRYSYCNKDGPRGPLPLGAPPRIRVPRVQEEEEEEDEEEEEEEEEEEEGVEEEVGGQQ
PDGSGTTTPRSPLDSDEKESEEEEGEGGEEEGGEEVEEVEEMEVEEKEEEEEGDEDEDDE
AMCMEDIRVVQVDDDDCELYEAEYVEEEKRRGERAAGGGEDGPPKEGEGEGGDNRAKDGG
G
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggcctcaggtgtaagcgcagaaaacaggcaaacccgaggaggaatagcgtg
acaagcttcaacaatggcttggaggccagctcagactcggacgacgaggacaagctgcac
atcgtggaggaggagagcctgcaagagcccgacgccaccgctaacgctaccgccgccgcc
gccgccgttgccaatggcgacaaggccacgcccaccgacgccagccaagatgccagcgca
gtattagcccataacggctcctggaatggagtgaacggcgagggtgggtctgaagaagag
gaggacatggaggaggaggaggaggcggagggggaggaggaggagacgaagaagatcctg
cagcagggagacaccgccgtcatctaccccgaggcgccggaggaggagtgcaccactccg
gacagagggggcgccgacgagaacggcctgccagacaccttctcccagctccacatttgc
ccgtactgctcgcgcggttacaagcgcaacgcctccttgaaggagcacatcaagtatcgc
cacgagaccagcgacgacaacttcagctgctcccagtgcagctacaccttcacctaccgc
tcccaactggagagacacatgagccaccacaagggctcgcgggaacagcgacacgtgacc
ccggcaacaggaggaaacaggaagtttaagtgtaacgagtgtgcgaaggcatttaaatac
aaacaccatctcaaagaacacctgcgcatacacagtggcgagaagccctacgagtgctcc
aactgcaagaagcgcttctcccactcgggctcctacagctcgcacatcagcagcaagaag
tgcgtgggcgcgcggcccaccgacggctccccgcggaccgccatcaagccggccccgccc
gcccccccaacgccggcccccgccgccaacgccgccgccgccgggacccccgtccgcgtc
ctcctgaaggagaagagcgacagcaagcctctccaggagcagctcccgctcacgcagatc
aagtctgagcccgtggagtacgagtgcaagcccgccacggtcaccgccgccgtcgccgcg
gcgaccaccacgccgtcgccaacgacgacgacgacgacgaccaccaccgccgccgccgcc
gccgccacgaccacgctgccccacgggctggccatggtggtgcccacggtggggctgatg
tcgcccatcagcatcaacctgggcgacctgcagagcgtgctgaaggtggccatggacggc
aacgtgctgcggcaggtgctgggctcggccagcggcctggtgatgcacggcaagcagggc
ctgctgctgcagcagccgcaccagcagatcatcagcctgcccgccttcgtggaccaggac
ggcaacaccaagatcatcatcaactacagcatcaaccccgccccgaacgccgccgccgcc
gtgcagacccacccgctgctcctgaagagggagccccccgccgccgccgccgccgcgccc
gtcctgctgaccgccaacgccacgacggcggccgcaactgcgggcgccaccgacgtctcg
ctggtgaagacggagcccgccagcccgcccgcgtcccccgccccggccgccgcggctgcc
gacggcgaggccacggcggcggcgcccgccaagggcacgccgtgtgcaccctgcgcggag
gacgacgacggcgccaaggccctgctcgccctgcggggggacggcgaggggaaggagggg
ggcggggccagcctggacccctccttcgccgccctgctgtcggaggcgggcgtgaccctg
gaggagatgaactctgggaggaagggcgcggcggccgagggcccggtcgccgccgccgcc
gacccgaccggcgccgccacagccgacgggctgtccgcgcccccgccggcctccccccgg
gcggagacgacgtcgcggggggacgacgacgcagcggcggcggcggtgaagagcgagccc
agggaccccgaaaggcccgaggacgcccaggcggagccgctggacctctcgctgcccaag
cagggcggcgagggctcggaggggccaggggggacgccgccgccgccgcccgccaagacg
caggagcagccactcaacctcacctgcctccgcaagagtcccgccggcaccttctacgtg
acggcggcgcaggccagcggcatcgtggcgggcggccagctgcccacgctggtggccatc
gccgggcaccagggcaccgtcagctgcctgcgcgccatcaacaccaccaccaagcgcacc
atcctcatcccccagctcacctacacctacaccacggcggccggaggcaccggggccaag
acggtgctgctcaacggacacaagcctcaggagcgtcgggcggacagtggctcagagggc
acgtcggcggtggaggagcagaacgactcggactcggcctcgccctccaagaagcgccgt
ctggagaacggcgtgtacccctgcgacctctgctccaaggtgttccagaagggcagctcc
ctgctgcggcacaaatacgaacacacaggcaagcggccgtacgagtgccatgtgtgccac
aaggccttcaaacacaagcaccacctcatcgagcactcgcggctgcactcgggcgagaag
ccgtacgcctgcgacaagtgcggcaagcgcttctcccactcgggctcctactcgcagcac
atgaaccaccgctactcctactgcaacaaggacgggccccggggcccgctgcccctcggg
gcgcccccgaggatcagggtaccaagggtccaggaggaggaggaggaggaggacgaggag
gaggaggaggaggaagaggaggaggaagagggggtggaggaggaggtgggggggcagcag
ccggacggcagtgggaccaccacgcctcgctctcccctggactcggacgagaaggagagc
gaggaggaggagggggaggggggggaggaggaggggggggaggaggtggaggaggtggag
gagatggaggtggaggagaaggaggaggaggaggagggggacgaggacgaggacgacgag
gccatgtgcatggaggacatccgggtggttcaggtggacgacgacgactgtgaattgtac
gaggcggagtacgtggaggaggagaagcggaggggggaaagggcggcgggcgggggagag
gacggccccccgaaggagggggagggggaggggggggacaatagagcaaaagatggagga
ggg
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