Gadus morhua (Atlantic cod): 115548612
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Entry
115548612 CDS
T10832
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04020
Calcium signaling pathway
Brite
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115548612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF2755
Motif
Other DBs
NCBI-GeneID:
115548612
NCBI-ProteinID:
XP_030219226
LinkDB
All DBs
Position
8:complement(5228614..5286733)
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AA seq
2574 aa
AA seq
DB search
MRPASDRPLPQGARGPPPPGGDQQRTPSLLRMHPTSDRSRDRALPAPRRTPVLGGRSQSS
SLSLPEPEAWRTPSPVSRGTPSPVSRGTPSSVSGGTPSPVSGGAPSPVSRGTPSPVSRGT
PSPVSRGTPSPVSRGTPSPVSRGTPSPVSRGAPSPVARPGLLQGSRSTSLQVPRALNEYL
ALPPRAATFDVPTTSGGGGGGEEEEEGEGREEGEGEGPAEPGSGSVSPHGMLRRRGGLLE
QKDVIMAHQAHKIQSTPQARRKEWEMARFGDESQPSTMDSGDGDVEGGTAEGQDAVSASG
MSGSLKQAKAQRARTMAMYNPVPHRQNCLTVNRSLFIFAEDNFIRKYARRVIEWPPFEYM
ILATITANCVVLALEQHLPGEDKTPMAKRLEKTEPYFIGIFCFEAGIKLLALGFVFHKGS
YLRNGWNVMDFIVVLSGIMATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSI
MKAMIPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCQPSVDILENETVDSTEVAFACGM
RKCPERYDCNDSWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGFTWNWI
YFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWIDR
AEEVMLAEENKNSGRSALDVLKRATSKKTGARRGPPGEGGEKFADTSTASMSRSRVNYRS
GRRGPAAYLRRQERMFRISIRRMVKTDSFYWIVLSLVALNTFCVAIVHHNQPDWLSIFLY
YAEFVFLGLFLAEMFLKMYGLGLRLYFHSSFNRFDCGVIVGSIFEVVWGFFRPGMSFGIS
VLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFVVVFALLGMQLFGGRF
IFEDYTPTNFDTFPASIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFG
NYTLLNVFLAIAVDNLANAQELTKDEEEEEAFFNRRYARSGEGLLSEGRRRPYLYRKRAI
HRGRPAFPEEPEAAEAEEEPPAAAAAFPNRRNRRRKVHMSVWEQRANQLRKRRQIASREE
LFGNPPEDAAETPTSGGHHVPALSPDEASPAPHQPESPMSAGMPLPEPPMSVVIPMPEPP
DSEPPPPPGADDRAGGGHHRAAGGGRHRGARKFRAGPGPEDGGARHRRHRHREARPEAKS
LDFGHAAPEGGGRREDPAGQKEEREERGERGESAGAEEGATMEDGGGVDPNSEVNSDHRL
SLPGADFPEPPQCEPAPLEPAGSVALMESSWPDEGGAVAGHGPPAPLEAAVAGEVVEGAA
AERRGHRASLKADRSNAEGGVVIEMCRQPLLERAPVPAKSKETDPLTSETDRDEESEDED
EEEEEEEEEVAPAPTQPAAPGSMFLFKSTNPIRRICHYVVTLRYFEMTILLVIVASSIAL
AAEDPVCANSDRNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVV
VGALIAFALTNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVL
NILIVYQLFMFIFAVIAVQLFKGKFFYCNDSSMNTEKQCQGYYIDYSRDKKEVRRREWKR
HEFHYDNVCWALLTLFTVSTGEGWPQVLQHSTDVTEENMGPSRGNRMEMSVFYVVYFVVF
PFFFVNIFVALIIITFQEQGDKMIQECTLEKNERACIDFAMSAKPMTRYMPQNRQTVQYR
LWHFVASPSFEYTVLVMIALNTVVLMMKYHSAPAAYDTVLKHLNSAFTVLFSMECMLKIM
AFGIVNYFRDTWNIFDFITVLGSITEIIVDLQSLNSINMSFLKLFRAARLIKLLRQGYTI
RILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDESHINQHNNFKTFFSAL
MLLFRSATGESWQEIMLSCLGGQECEPDPSIDPMTVSPDHLGGCGTEFAYCYFVSFIFFS
SFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEFDRSACGRIHYTAMYEMLTH
MSPPLGLGKKCPAKIAYKRLVLMNMPVDEDMSVHFTSTLMSLIRTALDIKIARGGEDRIG
LDSELQKEISVIWPYLPQKTLDLLVPINKDTDMTVGKIYASMMIMDYFKSNKAKKLRQQL
EAQKSSLMFKQLDASTLPEDILSNSEPLTLMGHSAGSALTRGGFLALSPISPQELFLPPV
SSDADSSQHQSMVGESGRGIGSSLAPPLGRGLAARAVSMPRLAIDTQQPPEVAGGGSMKR
SVSTVADERVNGLWQEEEAASPDRVYRPRHKSYKVAVSRSDRWHAGSRGERERGRSKERC
HLLSPDESRCNSAERSQQPSRSSSIERTHPREKQGNSSESPVPSTSESSTPSARRPTSQT
AARSHPHVSYSPLVCHATPRVGEEEAEAGDEEEEEEEEEEEQQQGSPETMRRGRPSWKGP
QQGASGERRGEPGRHHHHHHHHHHSPPRRYPSEPFLASQEDDHSPDAGGPMETLTFEAAV
AHSLGRSNTVTAAHSRSRSGWQIPNGGHFRKRMGQAASMAAGDALSDTEEEDRC
NT seq
7725 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgcctcggaccggcccctcccccaaggcgcccgaggccccccgccccccggc
ggtgaccagcagaggacgccgtcccttcttcggatgcaccccacctcggaccgctcccgg
gaccgggccctcccggccccccgccggacccccgtcctgggggggcggagccagtcctcg
tccctgtcgctcccggagccggaggcctggaggacccctagccccgtgtcccgggggacc
cctagccccgtgtcccgggggacccccagctccgtgtccggggggacccccagccccgtg
tccgggggggcccctagccccgtgtccagggggacccccagccccgtgtcccgggggacc
cctagccccgtgtccagggggacccccagccccgtgtccagggggacccccagccccgtg
tccagggggacccccagccccgtgtccaggggggcccccagccccgtggcccgccctggc
ctgctccagggctcgcgctccacctcccttcaggtgccccgggccctcaacgagtacctg
gctctgcccccccgggcggccaccttcgacgtgccgaccacgagcggaggagggggggga
ggagaggaggaggaggagggggaggggagggaggagggggagggggagggtccggccgag
cccggctcgggctccgtcagcccccacggcatgctccggcggagggggggtctgttggag
cagaaggacgtcatcatggctcaccaggcgcacaagatccagagcacgccgcaggcccga
cggaaggagtgggaaatggctcggttcggagacgagtctcagccgagcaccatggactcc
ggagacggggacgtggagggcggcacggccgagggacaggacgcggtctccgcttcgggg
atgtccgggtccctgaagcaagccaaggctcagagggctcggaccatggccatgtataac
cccgtgccccaccggcagaactgtctcacagtcaacaggtcgctcttcattttcgcagaa
gacaacttcatccggaaatacgcgaggagagtcattgaatggccaccgtttgagtatatg
atcctggccaccatcaccgccaactgtgtggtgctggccttggaacagcacctccctgga
gaggacaaaacgcccatggccaagagactggagaagacggagccgtacttcatcgggatc
ttctgcttcgaggcggggatcaagctgctggctctgggcttcgtgttccacaagggctcc
tacctgaggaacggctggaacgtcatggacttcatcgtggtgctcagcgggatcatggcg
actgccggggcccacatgaacatcccggtggacctgcgcaccctgagagccgtgagggtc
ctgagacccctcaagctggtgtctggaatcccaagcctgcagatcgtgctcaagtccatc
atgaaggccatgatcccgctgctccagatcggcctgctcctgttcttcgccatcctgatg
ttcgccatcatcggcctggagttctacagcgggaagctccaccacacctgccagccttct
gtcgacatcctcgagaacgagacggtggactcgacggaggtggcgtttgcctgcggcatg
cggaagtgtccggagcggtacgactgcaacgacagctggatcggccccaacgacggcatc
acgcagttcgacaacatcctgttcgccgtgctcaccgtgttccagtgcatcaccatggag
ggctggaccgccgtgctctacaatacgaacgacgccttgggtttcacctggaactggatt
tactttatccctctcatcatcatcgggtccttctttgtcctcaacctggttttgggtgtc
ctctctggggagtttgccaaggagagggagagggtggagaaccggcgggccttcatgaag
ctgcggcggcagcagcaggtggagcgcgagctaaacggctaccgggcctggatcgaccgc
gcagaggaggtgatgctcgcagaggagaataagaattcggggagatcagctttggatgtg
ctgaagcgagccaccagcaagaagacaggtgcccgccggggacccccgggagaggggggc
gagaaattcgccgacacgtcgaccgcgagcatgtcccgctccagggtgaactaccgcagc
gggcggcgcggcccggccgcctacctgcggcgccaggagcgcatgttccgcatctccatc
cgccgcatggtgaagacggactccttctactggatcgtgctcagcctggtggccctcaac
accttctgcgtggccatcgtccaccacaaccagcccgactggctctccatcttcctctac
tatgcagagtttgtgttcctggggctgttcctggcggagatgttcctgaagatgtacggc
ctcggcctccggctctacttccactcctccttcaaccgcttcgactgtggggtgatcgtg
ggcagtatcttcgaggtggtgtggggattcttccggcccgggatgtcgttcgggatcagc
gtgctccgggcacttcgcctgctccggatcttcaagatcaccaaatactgggcgtctctc
cggaacctggtggtgtcgctgatgagctccatgaagtccatcatcagcctgctgttcctg
ctcttcctcttcgtggttgtgttcgccctcctgggcatgcagctcttcggaggcaggttc
atctttgaggattacactcccaccaactttgacacgtttccagcttccatcatgacagtg
tttcagatcctgacgggcgaggactggaacgaggtgatgtacaacgggatccgatcccag
gggggcgtgcagtacgggatgtggtcctccatctacttcatcgtgctgactctgtttgga
aactacacactgctcaacgtgttcttggccatcgccgttgacaacctggctaatgcacag
gagctaaccaaggatgaggaggaggaggaggcgttcttcaacagaagatacgctcggagc
ggagagggcttgttgtcggaggggaggagacggccctacctctacaggaagagggccatc
caccggggccgacccgccttcccggaggagcccgaggccgcggaggcggaggaggagccc
cccgccgccgccgccgccttccccaaccgccgtaaccgccgccggaaggtgcacatgtcc
gtctgggagcagcgcgccaaccagctccgcaagcgccgtcagatcgcctcccgcgaggag
ctgttcggcaacccccccgaggacgcggccgagacgcccaccagcggcggccaccacgtg
ccggcgctgtcccccgacgaggccagcccggccccccaccagcccgagtcgcccatgtcc
gcgggcatgcccctcccggagccccccatgtcggtggtcatccccatgcccgagcccccg
gactcggagccgccgccgccgccgggggccgacgaccgggcgggcgggggccaccaccgg
gccgccggcgggggtcggcaccggggggctcgcaagttcagggcggggccggggccggag
gacgggggggcgcggcaccggcggcaccggcaccgcgaggcgcggcccgaggccaagagc
ctggacttcgggcacgcggcgccggaggggggggggcggcgggaggatccggcgggccag
aaggaggagcgggaggagcgaggggagcggggggagagcgcgggggcggaggaaggagcg
acgatggaggacgggggaggagtcgaccccaactccgaggtcaacagtgatcacagactc
agcttgcccggcgcggactttcccgagcccccccagtgtgagccggcccccctggagcca
gcgggctccgtggcgctgatggagagcagctggcccgacgaggggggggccgtggccggc
cacggccccccggcccccctggaggctgcggtggctggcgaggtcgtcgaaggcgcagcg
gccgagcgcaggggccaccgcgcctctctgaaggccgacaggtccaacgccgaggggggc
gtggtcatcgagatgtgccgacagccgctgctggagcgcgcccccgtcccagcgaagagc
aaagagacggaccctctcacgtccgaaacggacagagacgaggagtcagaggacgaggac
gaggaggaggaggaggaggaggaggaggtggcgccggcgccgacgcagcccgccgcgcca
ggcagcatgttcctcttcaagtccaccaaccctatccgaaggatctgccactatgtggtg
accctgcgctactttgagatgaccatcctgctggtcatcgtggccagtagcatcgccctg
gcggccgaggaccccgtgtgcgccaactccgacaggaacaaggttctccggtactttgac
tacgtcttcaccggtgtgttcaccttcgagatgatcatcaagatgatcgaccaaggcctc
atcctccacgacggctcctacttcagagacctgtggaacatcctggacttcattgtggtg
gtgggggcgcttattgcctttgctctgacgaatgtgatggggaacaacaaaggccgcgac
atcaagaccatcaagtccctccgggtgcttcgggtcctgagaccactcaaaaccatcaag
aggctccccaagctcaaggcggtgttcgactgcgtggtcacgtcgctgaagaacgtcctc
aacatcctcatcgtgtaccagctcttcatgttcatcttcgccgtcatcgccgtgcagctc
ttcaaggggaagttcttctactgcaacgacagctccatgaacacggagaagcagtgccaa
ggctactacattgactacagcagagacaagaaggaggtcaggaggagggagtggaagaga
cacgagttccactacgacaacgtgtgctgggctctgctcacgctgttcaccgtctccacc
ggagagggctggcctcaagtcctccaacactcaacggacgtgacggaggagaacatgggt
ccgagccgcggcaaccgcatggagatgtccgtgttctacgtggtctacttcgtggtcttc
cccttcttcttcgtcaacatcttcgtggccctcatcatcatcaccttccaggagcaggga
gacaagatgatccaggagtgcactctggagaagaacgagcgggcctgcatcgacttcgcc
atgagcgccaagcccatgacgcgctacatgccccagaaccggcagacggtgcagtaccgc
ctctggcactttgtggcctcgccctccttcgagtacaccgtgctggtgatgatcgccctc
aacaccgtggtgctcatgatgaagtaccactcggccccagcggcttacgacacggtgctg
aagcacctcaactcggccttcactgtgctgttctccatggagtgcatgctcaagatcatg
gcctttggcatcgtgaactacttcagagacacgtggaacatcttcgacttcatcacggtg
cttggcagcatcacggagatcatcgtggacctgcagtcgctgaactccatcaacatgagc
ttcctgaagctcttcagagccgccagactcatcaagctactgaggcagggctacaccatc
cgaatccttctctggaccttcgtgcagtccttcaaggccctcccgtacgtgtgtctcctc
atcgccatgctcttcttcatatacgccatcatcggaatgcaggtgtttgggaacatcaaa
ctgaacgacgagagccacatcaaccagcacaacaacttcaagaccttcttcagcgcgctc
atgctcctcttcaggagtgcgaccggggagtcgtggcaggagatcatgctctcctgtctg
gggggtcaggagtgcgagccggacccctccattgaccccatgaccgtgtccccagaccac
ctggggggctgcggcaccgagttcgcctactgctactttgtctccttcatcttcttcagc
tccttcctgatgctgaatctgtttgtggccgtgatcatggataactttgagtacctcaca
cgggattcctccatcctcggaccccatcatctggacgagtttgtccgtatctggggagag
tttgaccgctcggcgtgcggccgcatccactacacggcgatgtacgagatgttgactcac
atgtcgcccccgctgggtctggggaagaaatgccctgccaagatcgcctacaagaggctg
gtgctgatgaacatgcccgtcgacgaggacatgagtgtccacttcacgtccacgctgatg
tctctcatacgcaccgccttggacatcaagatcgcccgagggggtgaggatcgcatcggt
ctggactctgagctccagaaggagatcagtgtgatctggccctatctgccccagaagacc
ctggatctgctggtgcccatcaacaaagacaccgacatgacagtaggcaagatctacgcc
tccatgatgatcatggactacttcaagtcgaacaaagccaagaagctccgacaacagcta
gaagcgcagaagagcagcttgatgttcaagcaactggacgcttccactctgcctgaagac
atcctatccaacagcgagccactcaccttgatggggcacagcgccggctcagccctgacc
agaggaggcttcctggctctgagtcccatctcaccacaggagctgtttctacctcccgtg
agctcagacgctgactccagccagcaccagtccatggtgggggagagcggtagaggaata
ggaagctccctagcgcccccactagggcggggcctagcggcgcgagccgtttccatgccc
cgtctggcaatagacacacagcagcccccggaggtggcgggcggcggctccatgaagcgc
tccgtctccacggtggcggacgagcgggtcaatggtctgtggcaggaagaggaggcggcc
agccccgaccgggtctatcggccgcgccacaagagctacaaggtcgccgtttctcgctct
gaccgctggcacgcgggcagcagaggagagcgggagcgtgggcggtccaaggagcgctgc
cacctcctctccccagacgagtctcgttgcaactcggccgagaggagccagcagccctcc
cgcagctccagcatagagagaacgcacccccgcgaaaagcagggcaacagctccgagagc
ccggtcccgtccacctccgagtccagcaccccgagcgcgcgccggcccacctcccagacg
gccgcccgctcccacccccacgtctcctactccccgctggtgtgtcacgcgacgccccgc
gtgggcgaggaggaggccgaggcgggcgacgaagaggaggaggaggaggaggaggaggag
gagcagcagcagggcagcccggagaccatgaggcggggccgaccctcgtggaagggcccg
cagcagggggcgtcgggcgagcggcgcggcgagccgggccgccaccaccaccaccaccac
caccaccaccactcgcccccgcgccgctacccctcggagcccttcctggcgtcccaggag
gacgaccacagcccggacgccggcggccccatggagacgctgaccttcgaggccgccgtg
gcccatagcctgggccggtcgaacacggtgacggcggcgcactcgcgctcgcggagcggc
tggcagatccccaacggcggacacttccggaaacgcatggggcaggcggcgtccatggcg
gccggcgacgccctgagtgacactgaagaggaggacaggtgctga
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integrated database retrieval system
