Gadus morhua (Atlantic cod): 115548741
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Entry
115548741 CDS
T10832
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04145
Phagosome
gmh04814
Motor proteins
gmh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115548741
09142 Cell motility
04814 Motor proteins
115548741
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115548741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115548741
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmh04812
]
115548741
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
115548741
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
115548741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_Vps41
Nbas_N
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Pep3_Vps18
bMG5
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
115548741
NCBI-ProteinID:
XP_030219414
Ensembl:
ENSGMOG00000018897
LinkDB
All DBs
Position
8:complement(20270711..20282805)
Genome browser
AA seq
644 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDAKRGADGSGGPAAEDSDLDRKR
REAEALLQSVGITPDLAHAEPLRIITEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGDGN
AGPRTLHWDPDPSTLQLHSDSELMGRGPVKLCMSKVTQVDFLPKEMVSYCKETQTPTETV
THGEQKEEEEDEERDAAPVQDLQEEKGEQGEQEEEVKELTEEEKLQLLHTEDFMSFFERG
SRIVERALGERVDVCFDYSGRDLEDKEGEMQAGAKLVLNRQFADERWTKNRVVTCLDWSP
QYPELLVASYNNNEDAPHEPDGVALVWNLKYKKNTPEYTFHCQSEVMSAGFARFHPNLVV
GGTYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCS
WSLDMLSQPQDSLELMFKQSKAVAVTSMAFPLADVNNFVVGSEDGSVYTACRHGSKAGIT
DVFEGHHGPVTGLSCHSAAGAVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSCDYVYD
VMWSPTHPALFACVDLAGRLDLWNLNNDTEVPTASVCVEGAPALNRVRWSHSGREIATGD
SDGQVQVYDVGEQICVPKADEWTRFVRTLAEINENREEAEELAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctgaaggccgagttggagaggaagaagcagcgcattgcccag
atccgagaggagaagaagagaaaagaggaagagaagaaaaagaaggatggggatgctaag
cgtggagcggacgggtctgggggtcccgcggctgaagactcagatctggacaggaagagg
agagaggcggaggctctgctgcagagtgtgggtatcacccctgatttagcccacgcggag
cctctgaggataataacagaggatacgtgtctgtttcactacctagtccccgcccccatg
tctccttccaacaaatcagtgggcagcgacgccgggagccaggactccggtgacgggaac
gccggacccaggacattgcactgggaccctgacccttccactctgcagctccactccgac
tctgagctgatgggacgtggacccgtgaagctctgtatgtccaaggtgacacaggtggac
ttcctccctaaggagatggtgtcctactgcaaggaaacacagacccccaccgagacagtt
acacatggagagcagaaagaagaagaggaggatgaggagagggatgcggccccagtccag
gacctccaggaggagaagggggagcagggcgagcaggaggaggaggtcaaggagctgacg
gaggaggagaagctgcagctgctccacaccgaggacttcatgtccttcttcgagcggggc
agccgcatcgtggagcgggctctgggcgagcgcgtggacgtctgcttcgactacagcggg
cgggacctggaggacaaggagggcgaaatgcaggctggcgccaagttggtgctgaacaga
cagtttgcagacgaacgctggacaaagaaccgagtggtcacctgtctcgactggtcccca
caatacccagagctgctggtggcgtcgtacaacaacaacgaggacgccccgcatgagccc
gacggcgtggcactggtctggaacctcaagtacaagaagaacacgcccgagtacaccttc
cactgccagtcggaggtgatgtcagcaggcttcgcccgcttccaccccaacctggtggtg
ggcgggacgtactcgggacagatcgtcctgtgggacaaccggagcaacaagcgcaccccc
gtgcagaggaccccgctgtcggcgtccgcacacacgcacccggtgtactgtgtgaacgtg
gtgggcacccagaacgcccacaacctgatcagcatctccacagatggcaagatgtgctcc
tggagcctggacatgctctcccagccacaggacagcctggagctcatgttcaagcagagc
aaggcggtggccgtcacctccatggccttccccctcgccgacgtcaacaactttgtggtg
ggcagcgaggacggatcggtgtacaccgcctgccgccacgggagtaaggcgggcatcacg
gacgtgttcgagggccaccacggccccgtgaccgggctgagctgccacagcgcggcgggg
gccgtggacttctcccacctcttcatctcctcctccttcgactggaccgtcaagctctgg
agcaccaagagcacccgtccgctgtactcgtttgaggacagctgcgactacgtgtacgac
gtgatgtggtcccccacccatcccgccctgttcgcctgcgtggacctggccgggcgcctg
gacctctggaacctcaacaacgacaccgaggtcccgactgccagcgtgtgtgtggagggg
gctccggctctgaaccgcgtgcggtggtcccactctgggcgagagatcgccaccggggac
tctgacggacaggtgcaggtctacgacgtgggagagcaaatctgcgtccccaaggcggac
gagtggacccgcttcgtgcggacgctggccgagatcaacgagaaccgcgaggaggcggag
gagctggccgcctga
DBGET
integrated database retrieval system
