Gadus morhua (Atlantic cod): 115548899
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Entry
115548899 CDS
T10832
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115548899
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115548899
Transporters [BR:
gmh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115548899
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Gene cluster
GFIT
Motif
Pfam:
SNF
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
115548899
NCBI-ProteinID:
XP_030219666
Ensembl:
ENSGMOG00000014082
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Position
8:complement(2725866..2741141)
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AA seq
613 aa
AA seq
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MKTIGLDATGDSIHSARKELHCMIWEPNMNREHKKTKKSHGKARGKWANKTEYLLVVAGN
VVGLGNVWRFPYLCYKNGGGAFLVPYTMLAVLCGLPLFLMESAIGQYTQEGAVTCWRKLC
PLAQGIGYGQLIIKLYDFVYIVIQAWALLYLIFSFSAQLPWAHCGNSWNTENCVDLQYSQ
SNVTVGNFTNTTSAATEFWERRALSISGGIGELGSVRWDLALCLLACWTFCYFSIWKGVR
SSGKVVYFTAVFPYVMLLVLLIRGVTLPGAWEGIKYYLYPDLKQVAVLEVWVEAGSQIFF
SYSLASGTLTVLGSYNEIHNNCYKDTFLLCLLNSGTSFVAGFVVFSVLGFMAERQGVPVD
MVVDSGPGLAFIAYPQATALMPLPQFWTICFFLMLILLSVDTHFVTVECFITSVSDLFPK
HFRRSGRSEIFVLLICIASYLIQLPLASEGGIYIFQLIDFYACNRTCVDIMAVCQCLVLG
WIFGAERFYNIIEEMTGTRPCFYFKLCWKYFIPVLTMGSFIVYMLNYKQMEISAAYVYPY
WAHVLGWVMSMSSILMVPLFAVVQICLGTGPLRQRLSVLCQPVEDQTGQNTKMGAVETDE
GLKMLEESEPEMS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaattggactggatgcaacaggagattcgatacacagtgcgaggaaggagctc
cactgtatgatctgggagccgaacatgaacagagaacacaagaaaacgaagaagagccat
gggaaagccagaggaaagtgggcgaataagacggagtacctcctggtcgtggcgggcaat
gtggttggtctggggaacgtctggaggttcccgtacctctgctacaagaacggtggaggg
gcgttcctggtaccttacaccatgttagcggtgctctgtggattacccctgttcctgatg
gagagtgcgattggtcagtacacccaggaaggagcagtcacctgctggaggaagctgtgt
ccgctggcacaaggtattggatatggacagctcatcatcaaactctatgactttgtctac
attgtaatccaagcctgggccctactttacctgatattctccttcagcgcccagcttccc
tgggcccactgtggaaacagctggaatacagaaaactgtgtggatttgcagtattcacaa
tctaatgtgactgtaggaaactttaccaacaccacctctgcggctacagagttctgggaa
cgccgggctctgtccatctctggaggcatcggggagctgggcagtgtccgatgggacctg
gccttgtgtcttctggcctgctggaccttctgctacttcagcatctggaaaggggtcagg
tcttcaggaaaggttgtgtacttcactgcagtgttcccctatgtgatgctgctggttctc
ctcatcagaggggtgactctacctggagcttgggaaggcattaagtactacctgtatcca
gacttaaagcaggtggctgtccttgaggtctgggtagaggcgggatctcaaatattcttc
tcctacagcctggcttctggaacattgacagttttgggaagctataatgaaatccacaat
aattgttacaaggacaccttcctgttgtgtctgctcaacagtggaaccagctttgttgct
ggatttgttgtcttctccgtacttggattcatggcagagagacaaggtgttcccgttgac
atggtggtagactcaggtcctggcttggcattcatcgcatacccccaagcaacagccctg
atgccattgcctcaattctggaccatctgcttcttcctgatgcttattctactcagcgtg
gacacacattttgtgaccgtggagtgtttcatcacctcggtcagcgacctgtttcccaaa
cacttccgccgatctggaaggagtgaaatctttgttcttctcatctgtattgcaagctat
ctgatacaactgcctttggcctctgagggtggtatctacatatttcagctcatagatttt
tatgcctgtaatagaacatgtgtggacattatggcagtgtgtcaatgtttggtgttgggc
tggatatttggggctgaaagattctacaacatcattgaagagatgacaggaacacggcca
tgtttttactttaaactgtgttggaagtattttattccagtgttgacaatgggttccttc
attgtgtacatgctgaattacaaacaaatggagatttctgctgcatatgtctacccttat
tgggcccacgtgctgggctgggtcatgtctatgtcttctatcctcatggtgccactgttt
gccgttgtgcagatctgtcttgggacagggccattgagacagcgtttatccgtcctttgt
caacctgttgaagatcaaaccgggcagaacactaagatgggcgcagttgagacggatgag
gggctgaagatgttggaagagtccgagcctgaaatgtcctaa
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