Gadus morhua (Atlantic cod): 115548946
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Entry
115548946 CDS
T10832
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115548946 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115548946 (vcpip1)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115548946 (vcpip1)
Peptidases and inhibitors [BR:
gmh01002
]
Cysteine peptidases
Family C64
115548946 (vcpip1)
Ubiquitin system [BR:
gmh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
115548946 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
115548946
NCBI-ProteinID:
XP_030219767
Ensembl:
ENSGMOG00000011488
LinkDB
All DBs
Position
8:16263850..16271028
Genome browser
AA seq
1168 aa
AA seq
DB search
MSLLQSSKKKDRRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQKSLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLTRYGMDKQTGKAKLLK
DMSQGDMFDCSLLGDRAFLIEPEHVSTVGYGKDRSGSVIYLHDTLEEVKKANGNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIVLLDSLSGMRSSGDYSATFLPGLVPEE
QCKGKDGKHNKPICIAWSSSGRNHYLPLVGIKDTVLPKLPARLLPKAWGVPQDLIRTYIQ
LEADGSCVIGGDRSLQDKYLMRLVNAMEEVFMEKHGIHPSLVADVHQYIYRRTGVIGVQP
EEVTEAAKRSVQENRLHRCLICGALSELHVPGEWLAPGGKLYNLAKTTHGQLRPDKNYSF
PLNNVVCSYEPQRDLLVPDYKLSSLGTCNWCHGTSVRRIHGDGSVVYLDGDRTNTRSQGG
KCGCGFKHFWEGKEYDCLPEAFPITLEWGGCVVRETVHWFQYEMDVALNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHDRRLDEVAEGQQPMDTQP
PTKIILTGQKAKTIHKEELTMSRAERALQQSISENASSHQKRRTDRLKQEQNHGRPSSPA
ATPAISSSSAPATPTKATSSPASIKEKKIRVTTSDGRQAMLTLQAHTTFHELQRSIAKEF
SLPTSQQCIRHGFPPKELTPPKSGEETQAVALQHGDRVVVEILRAPEQKQGPVSRFSGSH
SSVHAVKSDAAASGRMNDGELQDNIDLEMSSLCLLATLMGEDVWSYARKLPHLFQRGGVF
YNIVRKDMGLMDGKHCTLPHLAGKTFVYNAAEDRLELCVDAAGHFAVGPDVEDLAKEALL
QLRSEGSPRGGGSREGSPSHGLLRLGSGGVVRRKEQTVAAFQGKGHSLGSVEDASPPQRP
ITRQHSSGVDLSASVSRDPPALSDISEDAGKELVRMAPGFVTMREGGPLEPGAMEQQRRK
LQEMVSSIQASMERHLKEQQSLAATPAAGPGERTGGARAGGPGSDPEPSATMDVSGGGPQ
SGMPPDQPDGGTSGGSQDNQDAEPMDHS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctacaaagctcaaagaagaaggacagacgaattttatctggtacctgtcca
gaccccaaatgccaggcgaggctattcttccctgcttatggttcgattagtattgaatgc
acagaatgtggccagcgccacgagcagaagagcctcttaaatgtcgaagaggtaaccgat
ccagatgtggttctacacaatcttctcagaaacgccttgctcggcgtgactggggccccg
aagaaaggcacggagttggtgaaagtaatggggctgtccaattatcactgcaagcttctc
tcccccgtcttgaccagatatggtatggataaacaaaccggcaaagccaagctcctcaaa
gacatgagtcaaggtgacatgtttgactgttcactcctcggcgacagagcttttctcatc
gaaccagaacatgtgtcaactgttggttatggcaaggaccgatcaggtagtgtaatatat
ctccatgacacattggaggaggtcaagaaagccaacggtaacagagaatgtctcatccct
gtgcacgtggacggagacggacactgcctggtccacgccgtgtccagggccctggtgggc
agggaactgttctggcacgccctgcgtgagaacctcaagcagaacttcaaacagaacctg
gaccgctacaaggccctcttccaggactttatcgatgcggctgaatgggaggacatcatc
aatgagtgcgaccctctgtttattccgcctgagggcgttcctctgggcctgaggaacatc
cacatattcggcctggccaatgtcctgcaccggcccatcgtcctgctggactccctgagc
gggatgaggagctcgggggactactccgctacgttcctcccaggcctggtaccggaggag
cagtgcaagggcaaggacgggaagcacaacaagccgatctgcatcgcctggagcagctcg
ggccggaaccactacctccccctggtgggcattaaagacacggtgctccccaagctccca
gcccggctcctccccaaggcctggggcgtcccccaggacctgatccggacctacatccag
ctggaggcagacggcagctgtgtgataggaggcgaccgcagcctgcaggacaagtacctg
atgaggctggtcaacgccatggaggaggtcttcatggagaagcacggcatccatccctcc
ttggtagccgacgtgcaccagtacatctaccggcgcaccggggtaatcggcgtgcagccg
gaggaggtgacggaagcggccaagcgatcggtccaggagaaccgtctccaccgctgcctg
atctgcggcgccctctctgagctccacgtgccgggcgaatggctggcccccggagggaag
ctctacaacctggccaaaaccacccacgggcagctccgacccgacaagaactacagcttc
ccgctcaacaacgtggtgtgctcctacgagccgcagcgggacctcctggtgccggactac
aagctgagctccctgggcacctgcaactggtgccacggaacctcggtgcgccgcatccac
ggcgacggctcggtggtgtacctggacggggaccggaccaacacccgctcccaggggggg
aagtgtggctgtggcttcaagcacttctgggaggggaaggagtacgactgcctccccgag
gccttccccatcaccctggagtgggggggctgcgtggtccgagagaccgtccactggttc
cagtacgagatggacgtggcgctgaacagtaacgtttacgacgtggccatgaagctggtc
accaagcacttcccgggggagttcggcagcgagctcctggtgcagaaagtggtgaacacc
atcctgcaccacacggccaagaagaaccccgacgagtacaaccccgtgtccatcgacggg
gctcacgaccggaggctggacgaggtggcggagggccagcagcccatggacacccagccc
ccgaccaagatcatcctgacgggccagaaggccaagacgatacacaaggaggagctgacc
atgagccgggcggagcgcgccctccagcagagcatcagcgagaacgcctccagccatcag
aagaggaggaccgaccggctgaagcaagagcagaaccacgggcgtccgtcatcccccgcc
gcgacgccggcgatctcctcgtcctccgcgccagccacgcccaccaaagccacctcctct
cccgcctctattaaggaaaagaagatccgcgtgaccaccagcgacggccggcaggccatg
ctcacgctgcaggcacacaccaccttccacgagctgcagaggagcatcgccaaggagttc
tccctgcccacgtcgcagcagtgcatccgccacggcttcccgcccaaagagctcacccct
ccgaagagcggcgaggagacccaggccgtggccctgcagcacggggaccgggtggtagtg
gagatactgagggcccctgagcagaagcaggggcccgtctcccggttctcaggctctcat
tccagcgtccacgccgtgaagagcgacgctgcggcgagcggcaggatgaatgacggggag
ctccaggacaacatcgacctcgagatgtcctccctctgtctcctggcaaccctgatgggt
gaagacgtgtggtcatacgccaggaagctccctcacctcttccagcgtggtggagttttc
tataacatcgtccggaaggatatgggcctgatggacgggaagcactgcaccctacctcac
ctggcggggaagacgtttgtgtacaacgcggccgaggaccggctggagctgtgcgtggac
gcggcgggccactttgccgtgggcccggacgtggaggacctggccaaggaggcccttctg
cagctgcggtccgaggggtccccccggggggggggcagccgcgaggggagcccctcccac
ggcctgctccggctgggcagcggcggcgtggtccgcaggaaggagcagaccgtcgccgcc
ttccaggggaagggccactccctgggcagcgtggaggacgcctccccgccgcagcggcca
atcacgcggcagcacagcagcggcgtggacctgagcgctagcgtgtcccgagaccccccc
gcgctgtcggacatcagcgaggacgcgggcaaggagctggtgcgcatggcgccgggcttt
gtcaccatgcgggagggcgggccgctagagcccggcgccatggagcagcagcggaggaag
ctgcaggagatggtgtcctccatccaggcctccatggagcgccacctcaaggagcagcag
agcctggccgccacgcccgccgcggggccaggcgagcggacaggtggggcccgggcgggg
gggccagggagcgaccccgagccgtcggcgacgatggacgtgtcgggcggggggccccag
agcggcatgccgcccgaccaaccggacggagggacgtcggggggctcccaggataaccaa
gacgcagagcccatggatcactcctga
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