Gadus morhua (Atlantic cod): 115549213
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Entry
115549213 CDS
T10832
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115549213 (chd7)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115549213 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
Chromo_MIT1
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
115549213
NCBI-ProteinID:
XP_030220130
LinkDB
All DBs
Position
8:complement(12723884..12772514)
Genome browser
AA seq
3220 aa
AA seq
DB search
MADPGMLSLFGDDAGLFSDGLDGLADCFPQQGAPPPGQPGGNPASLGMDHQGGGGAYHQG
LGQPKLGQLYDHGPYAGHMMPQAGQGGGPPNVNAPMNGMGNRYHGSPANPHHGYPGDPGG
GGGGGAAAGGGGGVWGQQQQQQQQQSRSPYQQPPAQPGGGPNQMAPYQMPRSDYGGMAGA
NSTPNAGRMAQHYPPAPQDPAHYLGHGGMGGAQMRLPQPPAQQQQPQQGYPNMGHTPRYP
HSPSRQTPHPHQHHQAMAGFPGGQYPGYQGQYGAMSQAMGPSMAQGPPMAQANNQANANP
GQAMGPGQLAQRYAQGSGPAAGPQVRYPPGPPHQPMHPQGLAQAPSQASPHLGPPAQGAY
PPPSSMSPMRGLGTPTPPPQQGRPPSAGLAGPPEVSGYQSAPGPMVAPLQRAPQHQQAHG
MPPGQMYPGMSPHCGPQMAPGRPQHQPGPHEAPPSQAGDPRQLVAQQQASRGGQPLQPAT
LGFPGPAATQHGAPPPNQGLAPPPQGATPHAHLPPHPHHLQMTPPAPGQPPLPWAPAASH
PLASPPLTPQKVPQIRHSPSDLPGEALATAPDRPAAAPGQPMDGEQPGGPDTKPKKKKKS
KKVKMAEGEEPEQGRNPSEDGTPPAGDGQAGAMATSPPAEKRKRKKKPKEKVEGKEPKEP
KTPKTPKTPKTPKEPKEPKEKKTKSSTPKTKTPKKTSTKKAESEGGASATKKESKRKREP
SISEDVEVKSPPPSPEDDDDDGTQKRRSSRQVKRKRYTEELEFRISDEDDSGEDSPAGQS
PSSQHQDLVETEGPVVEKIMTMRITKKQQESGEELEVEEFYVKFKSFSYLHCRWADLPEL
EKDKRIHQKIKRFRAKQLLNNFITEMDDEPFNPDYVEVDRVLDVSESPDENGETVTLYLV
KWCGLPYEDSTWELKSDIDQSKIDDYDVIAQRAPNTKHVDRPPMDGWKRCEASKDYRNSN
SLREYQLEGLNWLTFNWYNNRNCILADEMGLGKTIQSITFLHEVFLTGIQGPFLVIAPLS
TIPNWEREFRTWTELNAVVYHGSQASRKTIQAYEMYYRDPQGKVIKGAYRFHAVITTFEM
ILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFS
LLNFLEPERFPSEHTFMAEFGDLKTEEQVQNLQAILKPMMLRRLKEDVEKNLAPKEETII
EVELTNIQKKYYRAILEKNFSFLSKGGVGGGSGGGGAGPNVPNLLNTMMELRKCCNHPYL
IKGAEEKIVDEFRETHVQAETPDFHLQAMVQAAGKLVLIDKLLPKLKAGGHRVLVFSQMV
RCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLT
AADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDK
AVLQSMSGRDNAANGAPQLSKKEVEDLLKKGAYGALMDEEDEGSKFCEEDIDQILQRRTQ
TITIETEGKGSTFAKASFVSAGNRTDISLEDPDFWQKWAKKAELDLDAIHGRNTLVIDTP
RVRKQTRHFSSAKEDEMLEFSELESEGEEPSRPTAKPRRPQDRAQGYPRSECFRVEKNLL
VYGWGRWSDILSHGRYKRPLREADVETICRALLAYCLLHYRGDENIKSFIWDLIAPNADG
TTNTLSNHSGLSTPVPRGRKGKKGKLQAPPPQTPRADWLAGCNPDHLLQEDSYKRHLKHH
CNKVLLRVRMLYYLRQEVIGDQADRILEGAEISELDVWIPQPLHAEVPADWWNSEADKSL
LIGVFKHGYEKYTSMRADPGLCFLERVGMPDAKAMAAEQRGADMMTDGVEGEEEDPEYKP
LRMTFKDEMDEFTNSPLEEPQEADPEAKSGENGRVGGASGQAGRLYWPAASALTARLRRL
VTAYQRSNRRELQRQEALSRPDGRRRRRRDFNPDLAMLPPAEGGTAYLQEGGVFMAEGGA
AYLAKSGPFVPEAAAHTALMGELFFKERRQRWTRREEADFYRVVSTFGVVFHPPRQGFDW
AQFRAFARLDKKTDESLEKYYYSFIAMCKRVCRMSLKTHSELPDPTLIIDPITEERASRT
LYRIELLRRIREQVLPHPQLTERLLLCQPSPDLPDWWECGRHDHDLLLGASRHGVSRTDY
HILNDPELAFLEAHRRHAHKGGATARHAPTPDPGATPLLTPAEVASAASAAEATLAKEEE
EEEEVVGEGEATVKAEGETPKADDVKEEVEVEGEGKEENLASPKKEVKEEETELPASSQE
EQKEKPSEPIGSDQEETGKEGGEEEVEATAIEPPSSPPKEQPKTMSPQKEVLEEPEEEGR
GTEGSSPPSPKSPPTERSQEEDEEKMDEDDKSEKSSQAEASAPSEQKNFDEDSNVSLPAS
GRDETAEPSALQDLLPGLPERSYSFSFWPKDRVMINRMDNICDAILKGKWPVNRRQLFDF
PGNLLPGYSAAATSATAVAPATESPLQRRSLAELSMAAAHAAYSGSEDITLSPHVHQEDP
LSLTVPRQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHAATDTQNHAMDLTKGMHHHH
KAAASLAGFSSPSLKAQMELLQQQIPPSGHRANGSLDADLPIMRRRRGRRKNVEGLEMLF
MGNKKGGAAAGGAATEGGAEGDESEGTKASAGEGVREASRGGRGAGGSGRSPGRRPPAAP
EDGETATASNQELRDWLQQHPSYTMDMTSFTPKSEDLMMSQLSKPKQKRHRCRNPNKIDI
NTLTGEERVPVVNRRNGRKMGGAMAPPMKELSRWLLENPEFAIAPDWTDIVKQSGFLPEA
MFDRLLTGPVVREEGVRRRGRRPKSEIAKAAAAAQAAAAAQAAQATLASAASSSGGLNPL
LLSSLLGGMDLSSLQSLQSLQLGGMDLSSLQSLQSLQLAAGLMAFPPSSDPKQAAANAAA
ASMLPLMLPGMGGLGGMGGLSNMFSLGGLGGLFGGNLAAASSQSPFGAMVTGTAGNGTLE
EEEEVEEEEAEEEGSSKRRRDEEEGREGGAAEEGEAEGKKAKRRKRKAEREEKASGSVAT
PLAADPPSEAAVLNGDAAALLAGLSANSLGFNPFLLSSMAPGLFYPSVFLPPGLAALGLQ
GFPSASASTLAQLQSAMATASAVATATSSPTPRKEGGAAGEEQGGAAAQEGGGADSDLGG
EREEEEEEEETGGEGDDSPMEEEREGEGEQEGSSEKDKSD
NT seq
9663 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccccgggatgctgagcctgttcggagacgatgcggggctgttctcagacggc
ctggacggcctggccgactgcttcccccagcagggggcgcccccgcccggccagcccggg
gggaaccccgcctccctgggcatggaccaccaggggggtgggggggcgtaccaccagggc
ctgggacagcccaagctgggccagttgtacgaccacggcccatacgccggtcacatgatg
ccccaggcggggcagggcggcggcccgcccaacgtcaacgcccctatgaacggcatgggc
aaccgttaccacggcagccccgccaacccccatcacggttaccccggtgaccccgggggt
ggtggggggggaggagcggcggcgggaggagggggaggagtttggggccaacaacaacaa
caacaacagcagcagagcagatcgccctatcagcagcctccggcccagccagggggcggg
cccaaccagatggcgccctatcagatgcctcgcagtgactacggcggcatggcgggcgcc
aactcaacccccaacgcgggccgcatggcccaacactacccccccgccccccaggacccc
gcccactacctgggccatgggggcatgggcggtgcccagatgaggctcccccagcccccc
gcccagcagcagcagccccagcagggctaccccaacatgggccacacgccccgctacccc
cactccccctccagacagaccccccacccccaccagcaccaccaagccatggccggattc
ccgggagggcagtaccccggctaccagggtcagtacggggccatgagccaagctatgggg
ccctccatggcccaggggccccccatggcccaggccaacaaccaggctaacgctaaccca
ggccaggccatgggcccagggcagctggcccagcggtacgcccaggggtcaggccctgcg
gccgggccccaggtccgctaccccccaggacctccacaccagcctatgcacccccagggc
ctggcccaggcccccagccaggcctcgccccacctcggccccccggctcagggggcctac
cctcccccctcctccatgtccccaatgcggggcctgggcacacccactcccccgccccag
cagggccggccccccagtgccgggcttgctgggcccccggaggtgtcgggataccagtcg
gcccccggccccatggtggcccccctgcagcgggccccccagcaccagcaggcccacggc
atgccccccggtcagatgtacccagggatgagcccccactgcgggccccagatggcccct
ggccggccccaacaccagccagggcctcacgaggccccacccagccaggcaggggacccg
cggcagctggttgcccagcagcaggcctcccggggcgggcagcccctgcagcccgccacc
ctgggcttcccgggcccggccgccactcagcacggggccccgccccccaaccagggcctg
gccccgcccccccagggagccacaccccacgcacacctgcccccccatcctcaccacctg
cagatgacccccccggcccccgggcagccgcccctcccctgggccccggccgcctcccac
cccctggcctcaccccccctcaccccacagaaagtgcctcagatccggcattccccatcg
gacctgcctggcgaagccttagcgacggccccggataggccggctgccgccccgggccag
ccaatggacggcgagcagcccggcggcccggacaccaagccaaaaaagaagaagaagagt
aagaaggtcaagatggcagagggggaggagccagagcaggggcggaacccttcggaggac
gggaccccccccgccggcgacgggcaggccggcgccatggcaaccagtccccctgcagag
aagaggaagaggaagaaaaaaccaaaggagaaggtggagggcaaggagcccaaagaaccc
aagacccccaagacccccaaaacccccaagacccccaaagagcccaaagagcccaaggag
aagaagaccaagagctccacccccaagaccaagacccccaagaagaccagcaccaagaag
gcggagtcggagggcggggccagcgccaccaagaaggagtccaagaggaagagggagccg
tcaattagcgaagacgttgaggtgaaatccccgcccccctcacctgaagacgacgatgac
gatggaacccagaagaggcggtccagccggcaggtgaagaggaagcgctacactgaggag
ctggagttcaggatctcagacgaagacgacagcggagaggactcccccgcgggccagtcc
ccctcctcccagcaccaggatctggttgagactgagggacctgtcgtagagaaaatcatg
accatgcgaatcaccaagaaacagcaggagtcaggagaggagctggaggtggaggagttc
tacgtgaagttcaagagcttctcctacctgcactgtcgctgggcggacctgccggagctg
gagaaggacaagaggatccaccagaagatcaagaggttcagagccaagcagctgctcaac
aacttcatcaccgagatggacgacgagccttttaacccggactacgtggaggtggaccgc
gtgctggacgtgtcggagagccccgacgagaacggagagacggtgaccctctacctggtg
aagtggtgcggtctgccctatgaagactccacctgggagctcaagtcagacatcgaccaa
tcaaagatagacgactatgacgtcatcgcccagcgcgcgcccaacaccaagcacgtggac
cgcccccccatggacggctggaagcgctgtgaggcctccaaggactacaggaacagcaac
tctctcagggagtaccagctggagggcctgaactggctgaccttcaactggtacaacaat
cgtaactgtatcctggctgacgagatgggtctgggtaagaccatccagtccatcaccttc
ctccacgaggtcttcctcacggggatccagggccccttcctggtgatcgccccgctctcc
accatccccaactgggagcgcgagttccgcacctggacggagctcaacgccgtggtctac
cacggcagccaggccagccgcaagaccatccaggcctacgagatgtactaccgggacccc
cagggtaaggtgatcaaaggagcgtaccggttccatgcggtcatcaccaccttcgagatg
atcctgacggactgccccgagctgcgcagcgtgccctggcgctgcgtggtcatcgacgag
gcccaccgcctcaagaaccgcaactgcaagctcctggagggcctgaagatgatggacatg
gagcacaaggtgctgctgaccgggactcctctccagaacaccgtggaggagctcttcagt
ctgctcaacttcctggagccggagcgcttcccctcggagcacaccttcatggcggagttc
ggagacctgaagaccgaggagcaggtccagaatctgcaggccatcctgaagcccatgatg
ctgcggcggctgaaggaggacgtggagaagaacctggctcctaaagaggagaccatcatc
gaggtggagctcaccaacatccagaagaagtactaccgggccatcctggagaagaacttc
tccttcctgtctaaaggcggcgtaggaggagggagcgggggaggaggagcaggacccaac
gtccccaacctcctcaacaccatgatggagctgaggaagtgctgcaaccacccctacctc
atcaaaggcgcggaggagaagatcgtggacgagttccgggagacccacgtgcaggcggag
acgcccgacttccacctgcaggcgatggtgcaggcggccggaaagctggtgctgatcgac
aagctgctgcccaagctgaaggccgggggccaccgcgtgctcgtcttctcccagatggtc
cgctgcctggacatcctggaggactacctcatccagagacggtatccgtacgagcgtatc
gatgggcgtgtgcgcgggaacctgcggcaagcggccatcgaccggttttcgcggccggac
tcggaccgcttcgtcttcctgctgtgcacgcgggcgggggggctgggcatcaacctcacc
gccgccgacacctgtatcatcttcgactcggactggaacccccagaacgacctgcaggcc
caggctcgctgccacaggattggccagtcgaaggcggtgaagatctaccggcttatcacc
aggaactcgtacgagcgggagatgttcgacaaggccagcttgaagctggggctggacaaa
gccgtgctgcagagcatgagtgggcgggacaacgccgccaacggggcgccgcagctttcc
aagaaggaggtggaggacctgctgaagaagggggcgtacggcgcgctgatggacgaggag
gacgagggctcaaagttctgcgaggaagacatcgaccagatcctgcagaggaggacccag
accatcaccatcgaaacggagggcaagggctccaccttcgccaaggcaagcttcgtctcc
gccggcaacaggacggacatctctctggaggatcctgacttctggcagaaatgggccaag
aaggcggagctagacctggacgccatccatggacggaacacgctggtgattgacacgccg
cgcgtcaggaagcagacgagacacttcagcagcgccaaggaggacgagatgctggagttt
tctgagctggagagtgaaggcgaggagcccagccggcccacggccaaaccccgtcggccc
caggaccgcgcccaggggtacccccgctctgagtgctttagggtggagaagaacctgctg
gtctatggctgggggcggtggagtgacatcctgtcccatgggcgctacaagcgtcccctg
cgggaggcggacgtggagacgatctgccgggcgctgctggcctactgcctcctccattac
cgcggcgacgagaacatcaagagcttcatctgggacctaatcgcccccaacgccgacggg
acaaccaacaccctcagcaaccactcaggtctctctaccccggttcctcggggcaggaag
ggcaagaaaggaaagcttcaagccccgccccctcagactccgcgtgctgattggctggct
ggctgtaaccccgaccacctgctgcaggaggacagctacaaacggcacctcaaacaccac
tgtaacaaggtgctgctgagggtcaggatgttgtactacctcagacaggaagtcatcgga
gaccaggctgaccgcatcctggaaggagcagagatcagtgagctggacgtgtggatcccc
cagcccctccatgcggaggtccctgctgattggtggaactctgaggcggataagtccctg
ctgataggagtcttcaaacacggctatgagaagtacacgtcgatgcgagctgaccctggt
ctgtgtttcctggagcgcgttggaatgcccgacgctaaggccatggccgccgagcagaga
ggagcggacatgatgacggacggcgtagagggggaggaggaagaccccgagtacaagccc
ctcaggatgaccttcaaagacgagatggacgagttcaccaactcccccctggaggagccc
caggaggcggaccccgaggccaagtcaggagagaacggccgagtgggcggggcctcgggc
caggcaggacgtctctattggccggcggcctctgcgctgacggcccgcctgcggcgcctg
gtgacggcgtaccagcgctccaaccgccgagagctgcagcggcaggaggccctcagccgg
ccggacggccgccgccgccgccgccgcgacttcaaccccgacctcgccatgctgccaccc
gccgaggggggcacggcctacctgcaggagggcggggtcttcatggcggaagggggtgcg
gcctacctggccaagagcgggcccttcgtacccgaggccgccgcccacacagcgctcatg
ggagagctgttcttcaaggagagacggcagaggtggacgcgtcgggaggaggcagacttc
taccgggtggtgtcaaccttcggggtggtgttccaccccccgcggcagggctttgactgg
gcccagttcagggctttcgcccggctggacaagaagacggacgagagcctggagaaatac
tactattcctttatcgccatgtgcaagagggtgtgccgcatgagcctcaagacacactca
gagctccctgaccccaccctgatcatcgaccccatcactgaggagcgcgcctcccggacc
ctgtaccgcatcgagctgctgcgccgcatccgggagcaggtgctgccccacccgcagctg
acggagcgcctgctgctgtgccagccctcccctgacctccccgactggtgggagtgcggt
cgccacgaccacgacctgttgctaggtgcctcgcggcacggcgtgagccgcacggactac
cacatcctcaacgaccccgagctcgccttcctggaggcccaccgccgccacgcccacaag
ggcggggccacggcaagacacgcccccacgcctgaccctggagccacgcccctcctcacg
cccgccgaggtggccagcgctgctagcgccgccgaggctacactggccaaggaggaggag
gaggaggaggaggtggtgggagagggggaggcgacggtgaaggcggagggagagactcca
aaagccgatgatgtcaaggaggaggtggaggtcgaaggagaaggtaaagaggagaacctg
gcctcccccaagaaggaggtgaaggaggaggagacggagctcccggcctcaagccaagag
gagcagaaggagaagccgtcagaaccaatcggatcagaccaggaggagaccgggaaggag
ggaggagaggaggaggtggaggcaacggcgattgaacccccctcatcccctcccaaggag
cagcccaagaccatgagtccccagaaggaggtgctggaggagccggaggaggagggccgg
gggacagagggcagctctcctccttctcccaagtctcccccgaccgagaggagtcaggag
gaggatgaggagaagatggacgaagacgacaaatctgagaagtcttcccaggcggaggca
agcgctccgtcggagcagaagaactttgacgaggacagcaacgtgtctctgccggcgtcg
gggcgggacgagacggcggagccctcggcgctgcaggacctcctgcccgggctgccggag
cgcagctactccttctccttctggcccaaggatcgggtgatgatcaaccggatggataat
atttgcgacgccatcttgaagggcaagtggccggtcaacaggcgccagctcttcgacttc
cccggcaacctgttgccgggctacagtgccgcggcgacctccgccacggccgtcgcaccg
gcaacggagagcccgctgcagaggcggagcctagcggagctgtcaatggcggccgcacac
gccgcctacagcggcagtgaagacatcaccctgtccccgcatgtgcaccaggaggacccc
ctcagcttgacggtgccgcggcagcgccggcggaggaggaggaaggtggagatcgaggcg
gagcgcgcagccaagagacgcaacctgatggacatggtggcacagctgagagagagccac
gctgctacagacacccagaaccacgccatggacctcactaagggcatgcaccatcaccac
aaggctgccgcctcattggccggcttctccagcccctccctcaaggcccagatggaactg
ttgcagcagcagatcccgccctccggccacagggccaacggctcattggacgccgacctg
cccataatgcgaaggaggcgtggccgcaggaaaaatgtagagggactggaaatgctgttc
atgggcaacaagaaaggaggagcagcagcgggaggagcagcaacagaaggaggagcagaa
ggggacgaatcggaggggaccaaggcttcggcgggtgagggggtccgcgaggcatcccgg
ggcgggcgaggggcggggggttccgggcggagtccgggccgacgcccccccgccgccccg
gaggacggagagacagccaccgcgtccaatcaggagctcagagactggctgcagcaacac
ccctcctacaccatggacatgaccagcttcacaccaaagagcgaggacctgatgatgtcc
cagctgtccaagcccaagcagaagcgccaccgctgcaggaaccccaacaagatcgacatc
aacacgctgaccggggaggagagggtccccgtggtgaaccgccgcaacggacgcaagatg
ggcggggccatggctccaccaatgaaagagctctcccggtggctgctggaaaacccagag
tttgccatcgctcccgattggacagacatcgtaaagcagtcgggtttcctcccagaagcc
atgttcgaccgcctgctgaccggcccggtcgtccgcgaggagggggtccgtcgtcgtggg
cgaagaccaaagtctgagatagcgaaggccgcggcggccgcccaggcagcagctgcagcc
caggccgcccaggctacactggcctccgctgcctcctccagcggaggtctgaacccgctg
ctgctcagcagtctcctgggggggatggacctgtcgtcgctgcagagcctccagtctctc
cagctgggggggatggacctgtcgtccctccagagcctgcagtccctgcagctggctgcc
ggcctcatggctttcccgccctcctcggaccccaagcaggcggccgccaacgcggcagcg
gcctccatgctgcccctcatgctgcccggcatgggggggcttgggggcatgggggggctg
tccaacatgttcagcctgggcggtctgggcggtctgttcggagggaacttagccgccgcc
tcgtcacagtcgccattcggcgccatggtaacagggacggccggcaacggaaccctggag
gaggaagaggaggtggaggaagaggaggcagaggaggaagggagcagcaagaggaggaga
gacgaggaggaggggagagagggaggagctgcggaggagggagaagcagaagggaagaag
gcgaagagaaggaagaggaaggcggagcgcgaggagaaggccagcggcagcgtggccacg
cccctggcggcggacccgccctcggaggcggcggtgctgaacggagacgcggcggcgctg
ctggccggcctgtcggccaactctctgggcttcaaccccttcctgctgtccagcatggcc
ccggggctcttttacccctcggtgttcctgccccccggcctggccgccctcggcctgcag
ggcttcccctcggcctccgccagcacgctggctcagctgcagagcgcaatggccaccgcc
tccgccgttgccacggccaccagcagccccacccccaggaaggagggaggagcggcagga
gaggagcagggcggagcggcggcccaggagggcggaggagcggacagtgacttgggcgga
gagagagaggaggaggaggaggaggaggagacgggaggagagggggatgactcaccgatg
gaggaggagagggaaggggagggcgagcaggagggctcctcagagaaggacaagagtgac
tga
DBGET
integrated database retrieval system
