Gadus morhua (Atlantic cod): 115549214
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Entry
115549214 CDS
T10832
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115549214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115549214
NCBI-ProteinID:
XP_030220134
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Position
8:complement(13135358..13173859)
Genome browser
AA seq
2500 aa
AA seq
DB search
MSAVLLEVLERAELNKLPRGAQTKLERHLTELRTQHERLRADCDQQNFDVEKRLTESQEQ
FLSTARDLQTVKEENSRLNEELVTLKGIEGASTDGKPPEQTKTKHEIEAERRELARQLEK
RTQELEHLTEDVRLLKERLAESNRVKMEVQLKLDEIQSSEASIQGRERRVVQEKQLLQQQ
TERLSAELKTKSEELLSSARERGQETLELRCALDNTTEQVSGLQGQLAALREVSEGHHRR
AEDLNNKLKQCKEQQCAMEEKYRNELNAHIKLSSLYKGAASESEDKNQELGRAVEELSKL
VKDSGEANNALQKKLSEGEELRTRLQAELKEKMKKMEKEVENASMKAASKQCCVPSLTEE
QLDSMCPSAAAIAEIVKPGMKFFELYNAFSSAQSQLQLEKQESRRVSRVLDEIVQEVESK
APVLRRQREEYEALQRSMASLCNKLELARDEIHGLQKEKEEVKQHCSDLEKEKLRTERLL
EDTSTQLCSLLVEKEQQRGVRVTTEEDATSSDISSSSEVVSPRHISFSSVKELQTQNQTL
LGQLRGLEEERDRHTVQITSSRVSELEVRVEQLQKEVEQLREQRNQQKQLADSGCRQRDM
YRILLTQNTGYSLPPHGTEASPQPTPPRTPIPATRSTPQRPAATESAQIAHAKAALKQLN
DAYSVYKKEKAENDRLLSETTERLQQEVMELRASKAKMAAHTEFSNKRYDMLQDTVAAYR
REISALQARSTRTAALNQQQESIIHTLTHDLRLTNERLALEEVRVENMSKEKDMLRQAES
RLCQEKEVMLSEQRSQNLLLNNLKSIQLTMERNEADTCQRLSSKVEHLEAELVAMRTKMD
QEVEQRHAQGRNMDAQLLEAKKQLESQNVLQQKTKELLEHQVDVLRTQLASSSSSSSLEA
GTMATAASGPATRGAGLRAPPKGAASPAQQEVSELKERVRGAEEQSGELKEQLRSATASV
EQYKAVVLCLEDSLKKEKQARVPLELRLKELQEVQQQLEKRIQDEQKEKEQSLEEGRSAL
VAMEKRVGELQRSLKSSQSEQQEALERCAAAVSQEQRATQDSITQTRLAAEAQSKYEREL
MLHAADVEALQELKKQSQKEAASKRRLEEQLSNTSSSLREKTAGWTALERKMKEDLASQA
QRCGDLGRQNSLLHQQMDQMASSAKQLLPPQALDTSLSEEGKTTQQILEILRFVRREKEI
SLAQCEVSEGEAQRCRQRLEAQEVERKDLQDALNTERDRMQDLLKNVSQQEERLKKMEDI
KEVQEANRLLKADRDRLEQELQQVTAKVGKLQRDIAPLQLSLSQQAERIGSLQAEKRLLE
EDLKRWRTRAQQLMSQQKDSDVEEKQKLANEREAQQKRITHMAEESAKLKTELARANASS
NSAQAQLLGLKDNVARLSSERDSLKKDTESKNNDILEKNKTITQVKKIGRRYKTQYEELK
VQHDKLVEEAAAKPGRDAGSGQEVSQELNQAREELNKTREELNSHKEEAQKKQEELQKLQ
QEVEEARKENQKSKEQLQEVQTQVSQNQGQLTQVQSQLSQAQSQLAQNQNQASQSQKDLH
QAKTHSQQLLTQLKSAQAQAQARQRELQQTLANQKDLQQTQVTTQQSHNQELNTLKSIVS
QSERKVSDLQSRLDGLQKRVSEQEAEKQQLQDQLAAANQATDGSTASQSSPASDSTAASD
ANKALQEELAKLRQELSESSSREEQLRQQMTEKEEKIKKSFHGAKTKIQQLITAKQQLSQ
QVEELRQSREELRQSREEQEVRMGALKSQYEGRLLRLDRERRGPPGPDSREEAPDQSSSK
VSDHARSGDQRHLKSPAQDRGSSSTSDPPTANIRPTPSTTSPSNKPNPASGNKSTPRASI
RPMVTPATVSMPTPTATVMPTTQTDSQEVVISTSGSVHSTSSGLGNTPTSLSQPSSSQAT
AFVQPTQQQASNQEVASSMDQERPSTSSPVIGGAGPKRVREEEEEEPETSHSPPSSKKLR
LRQTVTLLEEGDGGMEGEDEMDRPDSVDDSQEIPEVGFPVLGTEGEESEDVGVSQSVPSD
QVIPQAAPQGRDVIVIDTDSESRESKESEEEEEEEEEEEKEEEEEDDEYKEEEDEDTGDG
GMGGEGSNDGSGGAEEEEEGAMSSEGSEPVKEEENLGAASSDCSSRPSSHSGEGSSSAVE
PLPPREMLYPQPSSTTSSPAPPTSSLTPRLPQPRRPPHPLPPRLYIQPPAPELGPPHAQR
QSSQLRRPSVGRGPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAA
LSTRFRFGPPEDLLPQSSGHSDLGQLASHGGNTTQHYTTQHYATQHTTHSDLGQLASHGG
LGMYESPLFLAAHEEEGGGRSVPTTPLQIAAPVTVFSESLPLDSSDNMASQSVPMVTNSG
GMGAGDDEVFMEQEGEGLQGSSESHPDPEASGQQSEDAALPSTSQDPDSSSAPRRPLVGH
AQSSSLASRGPAFRGRGDGRTTLIRRGVTFSRAGRGGVPQ
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagtgctgctggaggtgctggagcgcgcggagctcaacaagctgccgcggggc
gcgcagaccaagctggagcgccacttgacggagctgcggacccagcacgagcggctccga
gccgactgcgaccagcagaacttcgatgtggagaagcgtctgacagagagccaggagcag
ttcctctcaaccgccagagatctgcagactgtgaaggaggagaacagccgactcaatgag
gagctggttaccctgaagggcatcgagggggcgtcgacagatggcaaaccacctgagcag
acgaagaccaagcatgagatcgaggcggagaggcgggagctcgcccgtcagttggagaag
aggacccaggagctggagcacctgacagaggatgtgaggcttctgaaggaaaggctggca
gagagcaacagggtgaagatggaggtccagttgaagctggatgagatccagtcttcagag
gcttctatccagggccgtgagaggcgtgtggtgcaggagaagcagctgctgcagcagcag
actgagaggctgagcgctgagctgaagaccaagtcagaggagctgctgtcctccgccagg
gagagggggcaggagaccctggagctacgctgcgccctggacaacaccacggagcaggtc
agcggtctgcagggtcagctggccgccctcagggaggtcagcgaaggccaccacaggcgg
gcggaggacctcaacaacaagttgaagcagtgtaaggagcagcagtgtgcgatggaagag
aagtaccgtaatgaactcaacgcgcacatcaaactctcctccctctacaagggggcagca
tctgaatctgaggacaagaaccaggaactgggccgggcggtggaggagctcagcaaactg
gtcaaggactctggagaggcaaataacgcgctgcagaagaagctgtctgagggggaggag
ctgaggactcgtctgcaggcggagcttaaagagaagatgaagaagatggagaaggaggtg
gagaacgcctccatgaaggcagcgagcaagcaatgctgtgtgccctccctgactgaggag
cagctggactccatgtgtccgtcagcggcagccatcgctgagatagtgaagccggggatg
aagttctttgagctgtacaacgccttctccagcgcccagtcccagctgcagctggagaag
caggagtcgcggcgggtgagccgggtgctggatgagatcgtccaggaggtggagtccaag
gcgccggtcctgaggaggcagagggaggagtacgaggcgctgcagaggtccatggcctcg
ctgtgcaacaagctggagctggcccgcgacgagatccacggtctgcagaaggagaaggag
gaggtgaagcagcactgcagtgatctggagaaggagaagctgaggacagagagactgttg
gaggacacttctacccagctttgctccctgctggtggagaaggagcagcagagaggagtc
cgggtgaccacggaggaggacgccacctcctcagacatctccagctcctcggaggtggtc
agcccgcgccacatctccttcagcagcgtcaaggagctgcagacgcagaaccagaccctc
ttgggccagctgagaggcctggaggaggagagggaccggcacaccgtccagatcacatcc
tcacgggttagtgaactggaggtcagggtggagcagcttcagaaagaggtggagcagctg
agggagcagaggaaccagcagaagcagctggccgactcaggctgcagacagagagacatg
taccgcatcctgctgacccagaacactggctacagcctgcccccccacggtacagaggcc
tctccccagccaactccacctcgcacgcccattcctgctactcgttctaccccccagaga
cctgctgctactgagtcggcacagatagcccacgccaaggcggccctgaagcagctgaat
gatgcctacagtgtgtataagaaggagaaggcggagaatgaccggctgctgagtgagacg
acggagcgtctgcagcaggaagtgatggagctgagggccagcaaggccaagatggccgcc
cacacagagttcagcaacaagaggtacgacatgctgcaggacacggtggcggcgtaccgc
cgggagatcagcgccctgcaggcccgcagcacccggacggctgctctgaaccagcagcag
gagagcatcatccacacactgacgcatgatctccgcctgaccaatgagaggctggccctg
gaagaggtgcgtgtggagaacatgtccaaggagaaggacatgttgaggcaggctgagagt
cgtctctgtcaggagaaagaagtgatgttgtcagaacaacgcagccagaacctgctgctc
aacaacctcaagagcatccagttgacaatggaacgcaatgaggcagacacttgccagcga
ctcagcagtaaggtggagcacctggaggcggagcttgttgccatgaggaccaagatggac
caggaagtagagcagagacatgcgcagggccgcaacatggacgcccagctgctggaggcc
aagaagcagctggagagtcagaatgtcctgcagcagaagaccaaggagctgctggagcac
caggtggatgtgctgcggacccagctggcctcctcctcctcctcttcctccctggaggcc
ggaaccatggcgaccgccgcctccggaccggccacccgcggtgcagggctgagggccccc
cccaaaggagcagcctcccccgcccagcaggaggtgtcagagctgaaggagcgtgtgcga
ggagctgaggagcagagcggggagctgaaggagcagctgaggagcgccacggccagcgtg
gagcagtacaaggccgtggtgctctgcctggaggacagcctgaagaaggagaaacaggcg
cgggttcctctggagctcaggctgaaggagctgcaggaggtgcagcagcagctggagaag
aggatccaggatgagcagaaggagaaggagcagagcctggaagaggggcggagcgcactg
gtcgctatggagaaacgggtgggggagctgcagcgcagtctgaagagcagccagtcggag
cagcaggaggcgctggagaggtgtgcggcagccgtcagccaggagcagagagccacgcag
gacagcatcacgcagacgaggctggcagcggaggctcagtctaagtacgagagggagttg
atgctccatgcagcggacgtggaggccttgcaggagctgaagaaacagagccagaaggag
gcggcgtccaagaggcgtctggaggagcagctcagcaacacctcctcctccctgagggag
aagaccgctggctggaccgccctggagaggaagatgaaggaggacctggccagccaggcc
cagcgctgtggggacctgggccggcagaacagcctgctgcaccagcagatggaccagatg
gcctccagtgccaagcagctgctgccgcctcaggccctggacacgtccctcagcgaggag
gggaagaccacccagcagatcctggagatactcaggtttgtgcgtcgggagaaggagatc
tccctggcacagtgcgaggtctcagaaggagaggctcagcgctgcaggcagagactggag
gcccaggaggtcgagcgcaaggacctgcaggatgccctcaacaccgagagggacaggatg
caggacttgctgaagaacgtgtcccagcaggaggagaggctgaagaagatggaggacatc
aaggaagtccaggaagccaaccggctgctgaaagccgaccgagaccggctggagcaggag
ctacagcaggtcaccgctaaggtgggcaagctgcagagggacatcgcccccctccagctc
tccctctcccagcaggccgagcggatcggctcgctgcaggccgaaaagcgcctcctggag
gaggacctgaaacgctggaggacccgggcccagcaactgatgagccaacagaaggacagc
gatgttgaggagaaacagaaactggccaatgagagagaagctcagcagaagcgcatcacg
cacatggcagaggaatctgccaagctgaaaacggaactggccagggccaacgccagcagt
aactcggcccaggcccagctgctggggctcaaggacaatgtggcccggctgagctcggag
agggacagcctgaagaaggacacggagagcaagaacaacgatatcctggagaagaacaag
accatcactcaggtcaagaagatcggccgccgctacaagacccagtacgaggagctgaag
gtgcagcacgacaagctggtcgaggaggctgcagctaaaccaggaagggatgcagggtcc
ggacaggaagtgagccaggagctgaatcaggccagggaggagctgaataagaccagggag
gagctaaactcccacaaagaggaggcgcagaagaaacaggaggagctccagaagctgcag
caggaagtggaggaggcgcggaaggagaaccagaagtcgaaagagcagctgcaggaggtc
caaacccaggtgtctcagaaccaggggcagcttacacaggtccagtcccagctgtcccag
gctcagagccaactggctcagaaccagaaccaggccagccagtctcagaaagaccttcat
caagccaagacccacagccagcagctcctgacccagcttaagtcggcccaggcccaggcc
caagctcgtcaaagagagctacagcagaccctggccaatcagaaagacctccaacagacc
caggtgaccacccagcagagtcacaaccaggaactcaacaccctcaagtccattgtcagc
caatcagagagaaaggtgtctgacctccagagccggctggatggcctccaaaagagggtg
agtgagcaggaggcagagaaacagcagctacaggatcagctagctgcggctaaccaggct
accgacggtagcacagccagccagagttctccagctagcgattctacggcggccagcgat
gctaacaaggccctgcaggaagagctggctaagctgagacaagagctgtcagagagcagc
agccgggaggagcagctcagacagcagatgaccgaaaaggaggagaagattaagaagtct
ttccatggagccaagaccaagatccaacagctcatcactgccaagcagcagctgtcccag
caggtggaggagctgaggcagagtcgtgaggagctgaggcagagtcgtgaggagcaggag
gtccggatgggcgccctgaagtctcagtacgagggccggctgctgcgcctggaccgcgag
cggaggggccccccggggcccgacagccgcgaggaggcccccgaccagagctccagcaag
gtgtcggaccacgcccggtcaggtgaccagagacacctgaagagccccgcccaggaccgg
ggaagctccagtacatcagacccgcccaccgccaacatcagacccacccccagcaccacg
tctcctagcaacaagcccaaccccgcttccggcaacaagtccactccccgggccagcatc
cgccccatggttaccccggcaaccgtctccatgcccacacccactgccaccgtcatgccg
accacccagacggacagccaggaagtggtgatcagcaccagtggctccgtccactccacc
agctccggcttggggaacacacccacctccctcagccagccatccagctcccaggccact
gctttcgtccagcccacccagcagcaggcgtccaatcaggaagtagcatccagcatggat
caggagcgaccttcaacatcctctcctgtgattggaggagcggggccgaagcgtgtcaga
gaggaggaagaggaggagcccgagacatcccacagccccccctcaagcaagaaactacgg
ctcagacaaacagtcacactactggaggaaggagatggagggatggaaggagaggatgag
atggaccgaccggactcagtggacgacagccaggagatcccagaagttgggtttcctgtg
ttggggacggagggggaggagtctgaggatgtgggcgtgtcccagtcggtcccctcagac
caggtgatcccccaggccgctcctcagggccgtgatgtcatcgtgattgacactgacagt
gagagccgcgagagcaaggagtctgaggaggaggaagaggaggaggaggaggaggagaag
gaggaagaggaggaggatgacgagtataaggaggaagaggatgaagacactggggacgga
gggatggggggagaggggagtaacgacgggagtggaggagcagaggaggaggaggaagga
gccatgagttctgagggctcagaacccgtcaaggaggaggagaaccttggtgctgcgtcc
tcagactgctccagccggccgtcctcccacagcggagagggcagcagcagtgcggtggag
cccctcccccccagagagatgctttacccccagccctcctccacaacctcctccccagct
cctcccacctcctccctcacccctcgcctcccccagccacgacgccccccccaccccctc
cccccccgcctctacatacaaccgcccgcccccgaactgggacccccacacgcacagaga
cagtcctcccagctgcggaggccttcggttggccgagggccccagctgacccctggcatc
ggcagcatgcagcatttctttgacgacgatgaccggatggtccccagcaccccgacgctg
gtggtcccccaccgcaccgacggcttcgctgaggctatccactccccccaggtggcggct
ctgtccacgcggttcaggttcgggcccccggaggacctgctaccccagagctcagggcac
tcggacctggggcagctggcctcgcacggaggtaacacaacccaacactacactacacaa
cactacgctacacaacacactacacactcggacctggggcagctggcctcgcacggaggt
ctggggatgtacgagtctcctctgttcctggcggctcatgaggaggagggcggggggagg
agcgtccccacgaccccgctgcagatcgctgctccagtgacggtgttctctgagtctttg
cctctggacagcagtgacaacatggcctcccagtcggttcccatggttaccaactccggt
gggatgggggccggcgacgacgaggtcttcatggagcaggagggggagggcctccagggg
tcctcagagagccacccagacccagaggcctccgggcagcagagtgaggatgcagcgctg
ccctccaccagccaggaccccgacagcagcagtgctccacgccggcctctagtgggccac
gcccagagcagcagtctggcctccagaggaccagccttcagaggcaggggggacgggcgt
accacgctcatccgcaggggtgtcactttctcccgtgccggtagaggaggtgtccctcag
tga
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integrated database retrieval system
