Gadus morhua (Atlantic cod): 115549216
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Entry
115549216 CDS
T10832
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
115549216 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115549216 (depdc5)
Membrane trafficking [BR:
gmh04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
115549216 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
115549216
NCBI-ProteinID:
XP_030220141
Ensembl:
ENSGMOG00000006972
LinkDB
All DBs
Position
8:complement(12888161..12912274)
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AA seq
1570 aa
AA seq
DB search
MKTNRSYKLVVHKKGFGGSDDELVVNPKVFPQVSLGDIIEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKEATLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQASELWVRGEKVSCGYISENTRVVFRSTSAMVYIFIQMSSE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYTAKSIEEFPEVLRG
SIRQDHEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLEETDGFPTGQNST
AAQGNYLEAINLSFNVFDKHYMNRNFDRTGQMAVVITPGVGVFQVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNKPIPGDSRVGDDYNLPHWINHSFYTSKSQSSCCSFT
PRIKLAGRKLHAEKFRSNKDHALCAPRDSENSLPIQVDYDAHDALVFRLPGPSRAQRSSN
FRVGREREVSGRRSWGSAEVGSGPGASPPVRGGGQEELRSLASSDSLGPVSSVLLIPRHP
TVQYEVSSSLGYTSTRELLEKMMDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMEELQGSQQADPAHTSAELLE
LAYHEATGRRFRQAGENGLRGGGGVEESNGGLNRSSNRTGKTETQGSSPDHTPPGVDPIL
QLSAPPSVPRFCCTVGVDWKSLTTPACLPLTTDYFPERPALQNDYTQGCYDLLPPSDLER
REDEGPVMSAPQVFEEFICQRLMQGYQIIVQSHAKKTQATMATPLGSSPLYSRGLVSLRA
AEEEETLYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLCPPHCEASFRSC
WVEFCHERLEQYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGDGHW
DVYGEGVGGGAGDWVMLDGFIRFLEGLNRIRRRHRSDRIIRKSTTMKGHQGAAPPHYQPE
PAAPPAGKKGTSALTALMVLEHTHKTLEEQQGGKSSAGPSEAPGTLTAPPYVDSPRKDAA
FILDFIRSPRSSYLYQAQPAEAADGAAPPTTTTGGAAVQGVGDPAAGSTIDSGPSGPGGF
SLSSSSTLMDILEALTHPTTGVQLLPEQKGLPRSCFISAEVTHWLVNNVEGVATHIMAVE
IMQKMLEDGLIAHASGDAMRTFIYGSYFYCVVEKDGPSQPPAAPGSAAAAVEDFAAFQRK
WFEVAFLLEERRACDLPAFLLPWLPSRPASYASRHSSFSRSFGGRSQATTLLAATVPDQK
TVTLDVDINNRSERSEWCSCYYHGNFSLNTAFEVKLHWMAVTSAVLFEMVQGWHRKAASC
GFLLVPVLEVPFALTSSLYGDPLRGQLFIPLHTHCLLRSPTDSLFEGFEPETYWERMQLF
QEAILYRFGFVQDRASASTFNFPAENKPQYIHVTGTVFLQLPYSKRKFPCGQRRRRNSAS
SGGGGFGGEEPGFNWAYNTMLTKAWRTGALGDERLAARLLKDFTAFCCNHNNRLRAFWDA
CLDRMNASAP
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaacagatcctacaaactggtggtccacaagaagggcttcggcggcagcgat
gatgagttggtggtcaacccaaaggttttccctcaagtcagtctgggagacatcattgag
atcgcccatcccaccgatgaatacagtcctctcctgctgcaggtgaagagcctgaaagaa
gaccttcagaaagagaccatcagtgtagaccagacagtggcccaggccttcaaactacgg
gcgtaccaggatgtgatcgtcaacatcgtggaccccaaggaggccactctggacctggtg
gagctcaccttcaaagaccagtacatcggccgaggagacatgtggaggttgaagaagagt
ctggtcagcacctgtgcctacatcacccagaaggtggagtttgcaggaatcagggcccag
gccagtgagctgtgggtgcgaggagagaaggtgtcctgtggctacatcagtgaaaacacc
agggtggtgttccgctccacctcagccatggtctacatcttcatccagatgagcagtgag
atgtgggactttgacatttacggggacctatactttgaaaaggctgtcaatggcttcctg
tccgacctctttgccaagtggaaggagaagaactgcagccatgaggtgacggtggtcctg
ttctcacggaccttctacaccgcgaagagcatagaggagttccccgaggtcctgagaggc
tccatcagacaggaccacgaggggcgcttctatgaagacttctacagggtggtggcccag
aacgagcggcgtgacgagtggacgtctctgctggtgaccatcaagaagctcttcatccag
tacccggtgctggtccggctggaggagacagatggattccccacggggcagaactccacc
gcagcccagggaaactacctggaggccatcaacctctccttcaatgtgtttgataagcac
tacatgaaccgtaacttcgatcgaacgggtcagatggcggtggtgatcaccccgggggtg
ggcgtgttccaggtggaccgcctcctcatgatcctcaccaagcagcgcatgattgacaac
ggtatcggggtggacctggtgtgtatgggggagcagcccctccacgcggtcccgctcttc
aagcttcacaacaagccgatccctggagactctcgagttggagacgactacaacctcccc
cactggatcaaccacagtttctacacgtctaagagccagagctcctgctgctccttcacc
cccaggatcaaactagcaggacgcaagctccacgcggagaagttcaggagcaacaaagac
cacgccctgtgcgctccgagggactctgagaacagcctgcccatccaggtggactatgat
gcccatgatgcactggtgttcaggctgcctgggccctccagggcccagaggagcagcaac
ttcagggtgggtcgggagagggaggtgagtgggaggaggagctgggggtctgcggaggtg
ggtagtggtcccggggcctcccccccagtgcgtggcggggggcaggaggagctgcgcagc
ctggcctccagcgacagcctagggccggtgtccagcgtcctgctcatcccccgccacccc
accgtccagtacgaggtcagcagctccctgggctacaccagcacacgagagctgctggag
aagatgatggactcccagcgggactctagcgccccgggccgcttcacggtgggcagcgct
gagtccacactgcacatccggccggggggctacaccccccagcgcgccctcatcaacccc
ttcgccccctcccgcatgcccatgaagctcacctccaaccgccgccgctggatgcacacc
ttccccgttggaccgtctggcgaggcgatccagatccaccaccagaccagacagaacatg
gaggagctgcagggcagccagcaggccgaccccgcccacacctccgcggagctgctggag
ctggcctatcacgaggccaccgggaggcggttccgacaggctggggagaacgggctgaga
ggaggaggaggggtggaggagtccaatggaggcctcaacaggagcagcaacagaactggg
aagacggagactcagggctcctcccctgaccacacccctccaggggtggacccaatcctg
cagctgtctgcccccccctcagtgcccaggttctgctgcacggtgggcgtggactggaag
tctctgaccacgcccgcctgcctgcccctcaccaccgactacttccccgagcggcctgcc
ctgcagaacgactacacccagggctgctacgacttgctgccccccagcgacctggagagg
cgtgaggacgagggtccggtgatgagcgccccccaggtgtttgaggagttcatctgccag
cgcctgatgcagggctaccagattatcgtccaatcacacgccaagaagacccaggctacc
atggcaacgcccctgggcagcagccccctgtactcccgtggtctggtgtctctacgggca
gcagaggaggaggagaccctgtactggctgagcatgggaagaaccttccacaaggtgtgt
ctgaaggacaagatcatcactgtcacgcgctacctgcccaagtacccctacgagtcggcc
cagatccagtactcctacagcctctgccccccccactgcgaggcgtccttcaggtcctgc
tgggtggagttctgccacgagcggctggagcagtacaagtggaattacctggaccagtac
atctgctccgccggctccgaggacttcagcctcatcgactccctgaaattctggaggacg
cgcttcctgctgctgccggcgggcggggcgcgccgcgttgccgacggcgatggccactgg
gacgtgtacggggagggggtggggggcggcgctggggactgggtcatgctggacggcttc
atccgcttcctggaggggctgaaccgcatccgccgtcgccaccgctccgaccgcatcatc
aggaaaagcaccaccatgaaaggccaccagggggccgcccccccccactaccagccagag
ccagcagcgccccccgcaggcaagaaggggacctcggccctaactgccctgatggtgctg
gagcacacccacaagactctggaggagcagcagggggggaagtcctccgctgggccaagt
gaggcccccggcaccctgactgccccgccctatgtggacagcccacgcaaggacgctgcg
ttcattttggattttatccgcagtcctcgtagctcgtacctctatcaggctcagccggcg
gaggcagcggacggagcagcaccgcccaccaccaccaccgggggcgccgcggtgcaggga
gttggagaccctgcagccggcagcaccatagacagcggtccctctggaccaggaggcttt
tctctctcctcctcctccactctgatggacatcctggaggccctcacacaccccacgacg
ggggtgcagctcctaccagagcagaagggtctgcccagaagctgcttcatcagtgccgag
gtcacccattggctggtgaacaatgtggagggcgtggccacgcacatcatggccgtggag
ataatgcagaagatgctggaggacggtctgatcgctcacgcgtctggagacgccatgagg
accttcatctacggctcctacttctactgcgtggtggagaaggatggcccctcccagccc
cccgcggcccccggttcggcggcggcggcggtggaggactttgcggcgttccagaggaag
tggttcgaggtggccttcctgctggaggagcgccgtgcctgtgaccttcccgccttcctg
ttgccatggctccccagccgccccgcctcctacgccagcagacacagctccttcagccgc
agcttcggaggacgcagccaggccaccaccctgctagcggctacggtcccagaccagaag
acggtgactttggacgttgacatcaacaaccgtagcgagcgcagtgagtggtgcagctgt
tattaccacggcaacttctccctcaacacggcctttgaggtcaagctgcactggatggcc
gtcacctcggccgtgctctttgagatggtccagggctggcaccgtaaggccgcctcctgt
gggttcctgctggtcccggtgctggaggtcccgttcgccctcacctcctcgctctacgga
gaccccctcaggggacagctcttcatccccctccacacacactgtctgctgcgcagcccc
accgacagcctcttcgaaggctttgagccggagacgtactgggagaggatgcagctcttc
caggaggccatcctgtacaggttcggcttcgtccaggaccgcgcctcagcctccaccttc
aacttccccgcagagaacaaaccccagtacatccacgtcacaggcacggtgttcctccag
ctgccctactccaagaggaagttcccctgcggccagcggcggcggaggaactcggcctcg
tcgggcgggggggggttcgggggggaggagcccggcttcaactgggcctacaacaccatg
ctgaccaaggcctggaggaccggggcgctgggggacgagcgcctcgccgcacgcctgctc
aaggacttcaccgccttctgctgcaaccacaacaaccgcctcagggccttctgggacgcc
tgcctggaccgcatgaacgccagcgccccctag
DBGET
integrated database retrieval system
