Gadus morhua (Atlantic cod): 115549324
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Entry
115549324 CDS
T10832
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4 isoform X1
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04020
Calcium signaling pathway
gmh04148
Efferocytosis
gmh04218
Cellular senescence
gmh04310
Wnt signaling pathway
gmh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115549324 (nfatc4)
04020 Calcium signaling pathway
115549324 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115549324 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
115549324 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
115549324 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115549324 (nfatc4)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
115549324 (nfatc4)
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Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
115549324
NCBI-ProteinID:
XP_030220332
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All DBs
Position
8:2228763..2244724
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AA seq
915 aa
AA seq
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MGAAPGPGWEEGEFEFKLVFEEDPPRPLHQGPSPLLPTAADALTENPGERTEGDLAHLDC
DRDAERHLNTSQGNQPVGISGLSPSANQRAGMHSPPPRRALVREFSGTYESLPARSVQLS
ESRVMECPSIQITTISQDDDPAPPGSRYWDTGGGGGGGGGSWDRERLYLPLLDPFSYRDG
TPGSLSPSPASSPSSRGWLSPASSCDSLLVEEDDLSESAVHLVLSPSSRPTSPGGKKRRN
TPLGGSPCASRRGSYSSEEPHAAGPDGHDSAPLSQAPPLGCELSIPQKTRKTSLEQLSSR
EVDPEPAPGHSAPCPVPEEHQSRREPPSVGMDYLSVPPALGWGRTRASAHSPLFRTNALP
PLDWPLPSQFDQYELRMEVQPRPHHRAHYETEGSRGAVKAAPAGHPVVKLCGYTDRKPLS
LQVFVGTADDRSIRPHPFYQIHRVTGKMVGTASQESVQAGTKILDIPLSPESSMTALIDC
AGILKLRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPSAGAPGRVLALQVASLPIECS
QRSAQELPVIESVSLTSCCVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEARVDR
ENSNEGLLCVRVPAYSDRSVSRPVAVCLYVSNGKRKRSSTHCFKYIPIMFKEEESLRPRP
LALAPPPAPPLDGLCPMESSMEKADGPPRPPRGDPTSEDALLGFHLPPYPSAYSSPLYPV
ALGPHDEYFPRPDARPDDPGGGRRRRQRRRRRRRRQRRRRRRPPRRAAPRLREPGARLHR
AAAAAVPPRRAGGAAALALAVAGLAVPLVLAVALPLVLAQPLPGRQPPLRLPTAPPRAAL
PGLRPAGGAPLAPQLLLPGLLLPAPVLPLRRGLLGPPPGEGRGARGGALGGGLLPLPRLL
PLHRRHAPHHPGGSE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggtccgggttgggaggagggcgagttcgagtttaagttggttttt
gaggaagacccaccgcggccacttcaccagggcccgtccccgctgctgcccaccgcggcc
gacgcgctcacggagaaccccggcgagaggaccgagggcgacctcgcgcaccttgactgc
gaccgggacgctgaaaggcacctgaacacctctcagggaaaccagccagtgggcatcagc
ggcctgtcgccctcggccaatcagagggccgggatgcattccccgcccccccggagagcc
ctggtgagagagttcagtggcacgtacgagagcctgcccgcccgatccgtccagctgtcg
gagtcccgtgtgatggagtgccccagcatccagatcaccaccatctcccaggacgatgac
cccgccccgccgggctcccgctactgggacacgggcggcggcggcggcggcggcggcggc
agctgggaccgcgagcgcctctacctccccctgctggaccccttctcctaccgcgacggc
acccccggctccctcagcccgagccccgcctccagcccctcctcccgggggtggctaagc
cccgcctccagctgcgactccctgctggtggaggaggacgacctgagcgagagcgccgtg
cacctggtgctctcgccctcctcgcggcccacctcgccggggggcaagaagcggcgcaac
acgcccctgggggggtcgccctgcgcctcccgccgcggcagctactcctccgaggagccg
cacgccgccggcccggacggccacgactccgcccctctgtctcaagccccgcccctgggc
tgcgagctcagcatcccgcagaagacgaggaagacgtcgctggagcagctctccagcagg
gaggtggacccggagccggctccaggccacagcgccccctgcccggtgccggaggaacac
cagtccaggagagagcctccctccgtgggcatggactacctgtcggtgcccccggctctg
ggctggggccggacccgcgccagcgcgcacagcccgctcttcaggactaatgccctgccc
ccgctcgattggccgctgccctcccagttcgaccaatacgagctgcgcatggaggtgcag
ccccgcccacaccacagggctcactatgagacggagggcagccgaggggcggtcaaggct
gctcccgcaggccacccggtggtgaagctgtgtggctatacagaccggaagcctctgtca
ctgcaggtgtttgttggaacagctgatgaccgatcaatcaggcctcatcccttctatcag
atacacagggtcacggggaaaatggtgggaacggcaagtcaggagagtgtccaggctgga
accaagatcctggacatccccctcagccctgagtccagcatgactgcactcatcgactgc
gcagggattctgaagctgaggaactcggacatcgagctgaggaaaggggagaccgacgtg
gggaggaagaacacgcgcgtccggctggtattccgaactcatctgcctctggcgccctct
gctggcgctcccgggcgagtgctggccttacaggtggcctcgctgccgattgaatgctcc
cagcgctcggcccaggagctgcccgtcatcgagtcggttagcctgacttcctgttgtgtg
gagggaggggaggagctactgctgagtggcaccaacttcctgcccatctccagagtcctc
ttcatggagagagggacagacggcaagttacaatgggaagaagaggcccgtgttgaccgc
gaaaatagcaatgaggggctcttgtgtgttcgggttcccgcctacagcgaccggtccgtc
agtcggcccgtggccgtctgtctgtacgtctccaacggcaagcggaagcgcagcagcaca
cactgtttcaagtacattcccatcatgttcaaagaggaggagtctctgcggccccgcccc
ctggccctggccccgcccccggccccgcccctggacgggctgtgtcctatggagagctcc
atggagaaggcggacgggcccccccggcccccgcgaggggaccccacgtcggaggacgcc
ctgctgggcttccacctgccgccctacccctcggcctactcctccccgctctacccggtc
gcgctgggcccgcacgacgagtacttcccccggcccgacgcccggcccgacgacccgggg
ggggggcgacggcggcggcagcggcggcggcggcggcggcggcggcagcggcggcggcgg
cggcggccccctcgccgagcggcaccccggcttcgagagcctggagctaggcttcaccga
gctgctgccgccgcggtacccccacggcgggcggggggcgcggccgccctcgccctcgcc
gtggctggactcgccgtacctctcgtcctcgccgtcgccctcccactcgtcctcgctcag
ccccttcccggccggcagccccctctccggctccccactgcccccccccgggccgcacta
cccggcctacggccagcaggaggcgcccccctcgccccccagctcctcctaccaggactt
ctactacccgcccccgtactcccactacgacgggggctgctgggacccccccccggggag
gggcgtggcgcccgggggggggcgctgggcggagggctcctcccccttcccaggctcctc
cccctccaccgccgccatgcaccacatcaccctggaggaagtgaatga
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