Gadus morhua (Atlantic cod): 115549433
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Entry
115549433 CDS
T10832
Name
(RefSeq) contactin-4-like
KO
K06761
contactin 3/4/5/6
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115549433
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
115549433
Cell adhesion molecules [BR:
gmh04515
]
Immunoglobulin superfamily
Contactins
115549433
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
Others
115549433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
Pur_ac_phosph_N
Tissue_fac
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
115549433
NCBI-ProteinID:
XP_030220494
LinkDB
All DBs
Position
1:complement(29690744..29703311)
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AA seq
1033 aa
AA seq
DB search
MELLWKLIMLVSLVECLSGSGVLQRPSFTKQPGSVVFPFRSAEGRREVVFSCEAQGHPAP
YYRWRLNDSFIVPTLGSRYSLVGGNLHISHLNKEEDVGIYQCLASNSFGTIVSREASLHM
AYLENFKTQRRSPVRVREGQGVVLLCGPPLYSGELTFSWIFNEYPTFVVQDTRRFVSQKT
GNLYIAKVDPSDVGNYTCVVTNTVTKSSVQGPPAPLVLRADGVMGEYEPKIEVQFPDIVP
VAKSSTVRLECFALGNPVPSVSWRRLDGTAFGRKVDVNKASGVLEIPYFQPEDAGVYECL
AENSRGRNSAKGKLAFYAPPQLLEKPQDAQKPIDDTLIWECKASAKPKPSYRWLKNGEPL
DPMEDRVQVNNGLMTINSLKLSDIGMYQCVAENKHGRVFTNTELRVIATAPDFSQNMLKA
QTLARLGGDVLIECRPKMSPRGMISWRKGKEALRENHRISVLDNGSLRISNVTKGDAGLY
TCAARNQFGVASSDGNLLVKESTAITSPAGHLDVTVGESIILPCHVSHDDSLELKFTWFF
NEQLIHFGTHGGYFEKVGTRSAGDIMIRNIQLRHAGKYTCAVQTKVDSVSIATDVVVRGP
PGPPVELQVKEVTEATAALSWGPGPDHHSPVMGFSVQARSTFSLGWQAVTTVPEVLGGRQ
LSATVTDLSPWVEYEFRVLAANAIGTGEPSQPSRKVRSKETAPRITPARVNGGGGGRSEL
VITWEPVSEEFQSGPGFGYVVAFRPLGAQGWMQAAVTSPDAAKYIFKNESIPPFSAYQVK
VGVYNNKGEGPFGPVTTIYSAEEEPSRPPGRVRARSVSASEVEVSWKALSWSNSRRRILG
YELRYREEKELPGAARVLRTTGNRTSLLISHLEGSSTYLLSLRAYNSAGLGPPSAVVNVT
TKKPPPSQAPVKIMWNTSNSKVLLRWDQVHALENESEVTGYKVTYSQDRQGGRPSVVETN
STSLELSLPVNQDYVIQIQPFSEGGHGSSSQQITIPRIKGPIAMGTACLPSASPLVTVSG
LLLLLLLTARTAL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctatggaaactaataatgctggtatcgctggtggagtgcctgtctgggagc
ggggtcctccagaggccctccttcaccaagcagcccggtagcgtggtcttcccgttccgc
tctgctgagggccgcagagaggtggtgttcagctgcgaggcccagggccacccagcgccc
tactacaggtggaggctgaacgactccttcatcgtccccacgctggggtcccgctactca
ctggtgggggggaacctccacatcagccacctgaacaaggaggaggacgtgggcatctac
cagtgtctcgccagcaactccttcgggaccatcgtcagccgggaggccagcctgcacatg
gcctacctggagaacttcaagacccagagacggagtccggtgcgcgtgcgagagggccag
ggtgtggtgctgctttgtggtccgccactctactctggagagctcaccttctcctggatc
ttcaacgagtaccccaccttcgtggtccaggacacgcggcgcttcgtgtcccagaagacg
gggaacctgtacatcgccaaggtggacccgtcggacgtggggaactacacctgcgtggtg
accaacaccgtcaccaagagcagcgtgcaggggccgcccgcgcccctggtgctgagggcc
gacggagtgatgggcgagtatgagcccaaaatcgaggtgcagttccccgacatcgtcccc
gtggccaagagctccacggtgcggctggagtgtttcgcgctcggaaacccggtgcctagc
gtgagctggcggcgtctggacggcacggcgttcggccgcaaggtggacgtgaacaaggcg
agtggcgtgctggagatcccctacttccagcccgaggacgccggcgtctacgagtgcctc
gccgagaactcccgcggacgcaactcggccaaggggaagctggccttctacgctcccccc
cagctgctggagaagccccaggacgcccagaagccgatcgacgacaccctgatctgggag
tgcaaggccagcgccaaacccaagccctcgtaccgctggctgaagaacggggagcccctg
gaccccatggaggacagagtccaggtgaacaacgggttgatgaccatcaacagtctgaag
ctgtctgacatcgggatgtaccaatgcgtcgccgagaataaacacggccgcgtgttcacc
aacacggagctccgagtcatcgccactgctccagacttctcccagaacatgctgaaggcc
cagaccctggcccgcctggggggcgacgtgctgatcgaatgcaggcccaagatgtccccc
cgcggcatgatctcctggaggaaggggaaggaggcgctgagggagaaccacaggatctcg
gtgttggacaacgggagcctccggatctccaacgtcaccaagggcgacgcgggcctctac
acgtgcgccgccaggaaccagtttggagtggcgagcagcgatggcaacctgttggttaaa
gagtccacggccatcaccagcccggccggccacctggacgtgacggtgggggagagcatc
atcctgccctgccacgtgtcccacgacgactctctggagctcaagttcacctggttcttc
aacgagcagctcatccacttcgggacccacggcggatacttcgagaaagtcggcacccga
tctgccggggacatcatgatccggaacatacagctgcggcatgctgggaaatatacctgc
gctgttcagaccaaggttgacagcgtgtccatcgccaccgatgtcgtcgtcagaggtccc
cctggcccccccgtggagctgcaggtgaaggaggtgacagaagccacggcggccctgagc
tgggggcccggcccggaccaccacagccccgtgatgggcttctccgtccaggcccgctcc
accttctccctgggctggcaggccgtcaccacagttcccgaggtgctgggcggccggcag
ttgtcggccaccgtcaccgacctcagcccctgggtggagtacgagttcagagtgctggcc
gccaacgccatcggcaccggggaaccaagccagccctccaggaaggtccgctccaaggag
acggcccccaggatcactccagcccgggtgaacggaggtggaggagggcgttcagagctg
gtcatcacatgggagcccgtctccgaggagttccagagcggaccgggcttcggctacgtg
gtggccttccggccgctgggcgcccagggctggatgcaggccgccgtcacctcccctgac
gccgccaaatatatcttcaagaatgagagcatccctcccttctcggcctaccaggtcaaa
gtgggcgtgtacaacaacaagggagagggtcccttcggcccggtgaccaccatctactct
gcggaggaagagcccagccggccccccggccgcgtcagagcgcgcagcgtctcagccagc
gaggtggaggtctcctggaaggcgctgtcctggagcaacagccgccgacgcatcctgggc
tacgagctgcggtaccgggaggagaaggagctgccgggcgcggcccgggtgctccgcacg
acggggaaccggacgtcgctgctgatcagccacctggagggcagcagcacctacctgctc
tctctgagggcctacaacagcgccggcctcgggccccccagcgccgtcgtcaacgtcacc
accaagaagcccccccctagccaggctccagtgaaaatcatgtggaacacgtccaactcc
aaggtgctcctccggtgggaccaagtccacgccttggagaacgaatcagaggtgaccggc
tacaaggtgacgtacagccaggacaggcaggggggccggcccagcgtggtggagaccaac
agcacatccctggagctgtcgctgcccgtcaaccaggactacgtgatccagatccagccc
ttcagtgagggaggccatggtagcagcagccagcagatcaccatcccacggatcaaaggt
cccatcgccatgggaacggcctgtctgccctccgcatcgcccctggttaccgtctccggc
ctcctcctcctcctcctcctcacagccaggacagcgctatga
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