Gadus morhua (Atlantic cod): 115549436
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Entry
115549436 CDS
T10832
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115549436
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
115549436
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_14
Ig_2
LRRNT
LRR_LRWD1
LRR_RPS2
LRR_9
LRR_6
V-set
LRRCT
Motif
Other DBs
NCBI-GeneID:
115549436
NCBI-ProteinID:
XP_030220496
Ensembl:
ENSGMOG00000012197
LinkDB
All DBs
Position
8:19462726..19499963
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AA seq
621 aa
AA seq
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MIGSPGPGGRGVEPRAGRWQWVVTSLLVTASLLMPEGGLACPPRCECSAQLRSVSCQRRR
LTAVPEGIPTETRLLDLSRNRLRGVQAADLAPYPRLEEVDLSENLIVTLEPNAFANLQNL
KVLKLRGNQLKLVPMGAFARLGNLTSLDLSENKMVILLDYTFQDLRNLKHLEVGDNDLVY
ISHKAFSGLLGLEDLTIERCNLTSISGPTVSYLRSLVTLRLRHLSVAALEDQNFRKLSNL
RGVEIDNWPYLEHVSPQSFQGLDLRWLFITNTNITSVPSASFKNLVHLTHLNLSYNPISS
LEPWAFKDLLRLKELIMVNTGLMTVEPHALGGLRQIRVLNFSANDLQTLEEGAFHSVNSL
ETLRVDGNPLLCDCRLLWILQRRRTLNFDGRVPVCAGPAEVQGHSLSTFTDSALFDHFTC
QKPKIRNRKMQQVVTREGQPVSFLCRAEGEPVPAIIWISPQRRRITAKNSGRITVLPSGT
LEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRGQPLDTASAFFLNRSLYAGDFLNDTD
RNGTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFR
KSEPAVGGTTSGARKFNMKMI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgattggttcccctggtcctggcggccgtggcgttgagccccgggcggggcggtggcag
tgggtcgtgacctccctcctggtgaccgcctccctgctgatgccggagggcggcctggcg
tgcccgccgcgatgcgagtgctcggcccagctgcggtcggtgtcctgccagcggcgccgc
ctcaccgccgtccccgagggcatccccacggagacccgcctcctggacctcagcaggaac
cggctgcgcggcgtgcaggcggcggacctggcgccgtacccccgcctggaggaggtggac
ctcagcgagaacctcatcgtcaccctggagcccaacgccttcgccaacctgcagaacctg
aaggtgctgaagctccggggcaaccagctgaagctggtgcccatgggcgccttcgccagg
ctggggaacctgaccagcctggacctgagcgagaacaagatggtgatcctgctggactac
accttccaggacctgaggaaccttaaacacctggaggtgggcgataacgacctggtctac
atctcccacaaggcgttctccggcctgctgggcctggaggacctgacgatagagcgctgt
aacctgacgtccatctcgggccccacggtgtcctacctccgcagcctggtcaccctgcgg
ctgcgccacctcagcgtcgccgccctggaggaccagaacttccgcaagctttccaacctg
cgcggcgtggagatcgacaactggccctacctggagcacgtctccccgcagagcttccag
ggtctggacctgcggtggctgttcatcaccaacaccaacatcacgtcggtgccctccgcc
tccttcaagaacctggtgcacctcacccacctcaacctgtcctacaaccccatcagctcc
ctggagccctgggccttcaaggacctgctgcggctgaaggagctgatcatggtgaacacg
ggcctcatgaccgtggagccccacgccctgggcggcctgcggcagatccgcgtgctcaac
ttctccgccaacgacctgcagacgctggaggagggcgccttccactcggtcaacagcctg
gagacgctgcgggtggacgggaacccgctgctgtgcgactgccgcctgctctggatcctg
cagcggcggcgcacactcaactttgacggcagggtgccggtgtgcgcgggccccgcggag
gtgcagggccacagcctgagcaccttcaccgactcggcgctctttgatcacttcacctgc
cagaagcccaagatccgcaaccgcaagatgcagcaggtggtgactcgcgagggccagccc
gtcagcttcctgtgccgcgccgagggggagcccgtgcccgccatcatctggatctccccg
cagcggcgccgcatcacggccaagaactcgggccgcatcacggtgctccccagcggcacg
ctggagatccgctacgcccagctcaccgacagcgggacctacatctgcattgccagcaac
gccggcggcaacgacacctactttgccacgctgacggtgcgcggccagcccctggacacc
gcctccgccttcttcctcaaccgctcgctgtacgccggcgacttcctcaacgacaccgac
cggaacggcacgcgcgtgttcctcaagttcaccctggacctgaccaccatcctggtgtcc
acggcgatgggctgcatcaccttcctgggagtggtgctcttctgtttcctgttgctgttc
gtgtggagccggggacgcggccaacgcaagaacaacttcacagtggagtactctttccgg
aagtcagagccagcggtcggcggcaccaccagcggcgcccggaagttcaacatgaagatg
atatga
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