Gadus morhua (Atlantic cod): 115549467
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Entry
115549467 CDS
T10832
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115549467
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
115549467
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
115549467
NCBI-ProteinID:
XP_030220548
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All DBs
Position
8:<19357535..19380301
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AA seq
1164 aa
AA seq
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IWHVSPVPASTMKKKAAEGGGYNHINAATATTSRCTRRRSSSKNCLELVAAGAGSQGALT
VRQSGVANSAVMDETEDGEEESKFQHPRLRRAGGSGGGGGAGGGSIRMKNFTPGGGAACA
STVSRRASNISEPGLAHAEDVPVAPRPSVAALFRAAETQTTCPEDAGRGKSKRASWTEAS
RSKVALEVFHATVGDGCSNVAAISSMKCNKNGECRRDSGTGSLRSIISKQERQTGGLGRA
EDGGGKRGACNSTSASMDGSITPGGSLTGGQGGESSNPGVTPVSSGVTEKKDSKVSFSNA
PSRKTSSSLHGPTTSQQPRNSVTFQKPEDGPQIVAAADDGEPGGSTFMQRQFSSMLQPGV
NKFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLMFMVGNLIIIPVGITF
FKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFIVDF
VSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFH
MTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVXXXXXXLYS
FAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQ
YQEKYKQVEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEESILEELNEPLREEIVNFNC
RKLVASMPLFANAEPNFVTAMLTKLRFEVFQPHDYIIREGTIGKKMYFIQHGVCNVITKG
TLGMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAFETV
AIDRLDRIGKKNSILMHKVQHDLNSGVFNNRENEMIQEIVKYDREMVKLVDLQRPRAMSM
TPSIGGMFAPPGTSHGASAIATLQQAVAMSFCPQMGAGPMVGPGTLQSPRMVRRFQVMQN
LASPVSMSPLQAMTPQGLGGAFGISSPPVQSPLAGPARTFQYMGGAGPSGSQLSLVQHHV
PSPTQTQQRPPSHKSTHSLHAATLSQDARARSASQTSLPQEGTPHAPSAAPSPSPSTRTS
NTSIGPAPPPHACQPGPSGVARPAGPPQRVAFASTPPPAGPAPGAGPAPGAAAVAPPERG
VSKKDSIVSLPELDSARNRLSSNL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atttggcatgtttcaccggttccggcttcgaccatgaagaagaaggcggcggagggcggt
ggatataaccacatcaacgcggccaccgccaccacctccagatgcacgaggagacgaagc
agcagcaagaattgcctcgagttggtggcggctggtgccggtagccaaggcgcgctgacg
gtcaggcagtctggggtggcgaacagcgccgtcatggacgagacggaggacggggaagaa
gagtccaagtttcagcatccgcggctgcgccgtgccggggggagtggcggcggcggcggc
gcaggcggcggcagcatcagaatgaagaactttacgccaggagggggagccgcgtgcgcg
tctacggtctccaggagagcctcgaacatcagcgagcccggccttgcgcacgcagaagac
gtccccgtcgcccctcggcccagcgtagcggctttattcagagctgcggagacccagaca
acctgtcccgaggatgctgggcgcggcaagagcaaaagagcatcctggacggaggcgtcg
cgctcaaaggtcgcgctagaggttttccacgcgacagtgggtgatggttgtagtaacgtc
gctgccatttccagcatgaaatgcaacaaaaacggagaatgcagaagggactctggcacc
gggagcctgcgctcgatcatctccaagcaggagaggcagacaggagggttggggagagcc
gaggacggcggcgggaaacggggcgcctgtaactcgaccagcgccagcatggacggctcc
atcaccccgggcggctcgctcactggggggcaggggggagagagctccaacccgggcgtc
acacccgtctcgagcggtgtcacggagaagaaggactccaaagtgtccttctccaacgcg
cccagccggaagacctcgtcctcactccatggcccgacaacgagccagcagccccggaac
tcggtcactttccagaagccggaggacggaccccaaatcgtggcggccgccgacgatggg
gagcccgggggcagcaccttcatgcagcggcagttcagtagcatgctacagcccggagtt
aacaaattctccttacgcatgtatggcagtcagaaagcagtggagagggagcaggagagg
gtgaaatcagccgggaactggattattcacccgtacagcgactttaggttctactgggac
ttcaccatgctgatgttcatggtcggcaacctgatcatcatcccggtgggcatcaccttc
ttcaaggaggagaccaccacgccctggatcatcttcaacgtggtgtcggacaccttcttc
ctcatggacctggtgctcaacttccgcacgggcatcatcatcgaggacaactcggacatc
atcctggaccccaagaccatcaagaagaagtacctgaagacgtggttcatcgtggacttt
gtgtcctccatccccgtggattatatcttcctgatcgtggagaagggcatcgactcggag
gtgtacaagacggcccgggcgctgcgcatcgtccgcttcaccaagatcctcagcctgctg
cggctgctgcgcctctcccggctcatccgctacatccaccagtgggaggagattttccat
atgacctacgacctggccagcgcggtgatgcggatcttcaacctgatcgggatgatgctg
ctgctgtgccactgggacggctgcctgcagttcctggtgcccatgctgcaggacttcccc
tctgactgctgggtgtccctcaacaagatggtnnnnnnnnnnnnnnnnnngctgtactcc
ttcgccgtattcaaagccatgagccatatgctgtgcatcggttacggccggcaggcgccc
gagagcctctctgacatttggctcaccatgctgagtatgatcgtaggagccacctgctac
gccgtcttcattggccacgccaccgctctcatccaatcgctggactcctccaggaggcag
taccaggaaaagtacaaacaagtggagcagtacatgtcgttccacaagctgccttcagac
ttccggcagaagatccatgactactacgagcacagataccagggcaagatgtttgatgag
gagagcatcctcgaggagctcaacgagccgcttagagaggaaatcgtcaacttcaactgc
cgtaagctggtggcgtccatgccactgtttgccaacgctgagcccaactttgtgacggcc
atgttgaccaagctgcggtttgaggtcttccagccccatgactacatcatcagggaggga
accatcggcaagaagatgtacttcatccagcatggcgtctgtaacgtcatcaccaaaggc
accctgggaatgaaactgtctgacggatcatactttggagagatctgcctgctgacgcgc
ggccgccgcacggccagcgtgcgggcggagacctactgccgcctgtactccctgtccgtg
gaccacttcaacgaggtgctggaggagtaccccatgatgaggcgggccttcgagacggtc
gccatcgaccgcctggaccgcataggtaagaagaactccatcctgatgcacaaggtgcag
cacgacctcaactccggcgtgttcaacaaccgcgagaacgagatgatccaggagatcgtc
aagtacgaccgcgagatggtcaagctggtggacctccagcggccgcgcgccatgtccatg
acgccctccatcggcggcatgttcgccccgcccgggacgtcccacggagcctccgccatc
gccaccctccagcaggccgtggccatgagcttctgcccccagatgggggccggccccatg
gtggggcccgggaccctgcagtcgccccgcatggtcagaaggttccaggtgatgcagaac
ctggccagccccgtctccatgtcccccctgcaggccatgaccccccagggactgggaggg
gccttcgggatctccagccccccggtgcagagccccctggccggcccggcgaggacattc
cagtacatgggcggggcggggccctccgggtcccagctctccctggtgcagcaccacgtg
cccagtcccacacagacccagcagaggcccccctcacacaagagcacccactcgctccac
gctgccaccctgagccaggacgcccgcgcccgctccgcctcccagacctcgctccctcag
gaggggacgccgcacgcgccctcggccgcgcccagcccgtctccgtccacgcgcacctcc
aacacctccatcggccccgccccgcccccccacgcctgccagccgggtccctcgggcgtc
gccaggccggcgggccctcctcaaagggtggccttcgcctcgacccctccccccgccggg
cccgcccccggtgcggggcccgcccccggtgccgccgccgtggcgcccccagaacggggc
gtttccaaaaaagattccatcgtcagccttccagagctagactctgccagaaaccggctg
tcttccaacttgtga
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