Gadus morhua (Atlantic cod): 115549475
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Entry
115549475 CDS
T10832
Name
(RefSeq) laminin subunit gamma-2-like
KO
K06246
laminin, gamma 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04382
Cornified envelope formation
gmh04510
Focal adhesion
gmh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115549475
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115549475
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115549475
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
BDV_P24
Exonuc_VII_S
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
115549475
NCBI-ProteinID:
XP_030220553
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All DBs
Position
8:complement(16581923..16598327)
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AA seq
1130 aa
AA seq
DB search
MTWVHFCGILAFVVVVHGTFTQHNSGQRCDCNRKSRYCVLDAEGMRCLDCRGNTTGRRCE
HCEVGFFRWVPGQHCSPCRCSSSGSVASTCDSRGRCSCKEGVTGDKCDRCTNGAPLGSNG
CTGAVLRDEPVDRSTSCFCHGHASSCGVAHGYAAHPIESKFTDGPEGWQLSTGRGVLTSQ
VQFRWVPIHEDLEVISQNSLPTYLNAPARYLGNQVLSYGQNLSFSLRLDRGVRHPSTNDV
VLEGAGLRVGAALGELRSIIPCGQKIPFSFRLDERSGSKWRPKLSQLQFQSLLHNLTAIK
IRATFGEDGRGYLDNVSLMSARGGGAGGPAPWVQSCVCEPGYQGAHCGRCGAGFKRTSPA
DGAFGACEPCDCKAGSCDPDTGDCFSADETQRSQACPGGYYSDPNQPLSCVRCPCAGGVG
CSLKPGSLEVQCDNCPPGVTGFRCQLCGDGLYGDPLGERGPQRPCQACSCPGRGDSLEGT
HCDPFSGECLKCVDESRDGQPKACPEGSYHSRLTDACEACKCDPIGSLFSLCSAEGQCTC
REGYQGRRCHRSTCPSCFQPIISQVEGYAAKLRELEKLFSNLGGGTGSDSTHQLDTALKA
AGALVTDLTNTVDTLKVSERNLQLRVTSISDQQLEESQDVQSLTRAAARLRQEQAAYDTR
SAAVQTLIDQMTFTLKDAKAKIQAADLPQGDEAQAVSNNLFSTLITKAKELAERHLVKAE
EVEQSAGDALADSGNSLALMRGLMSRENQVKELLGNLNNMYDKTSGKVKTMENQATRLSS
QAGVESQLAGDMLKQITGMEPAIGPPIQVDDLVSRLDTLTDQVSPNILASRALLKDVDQD
KDLARGLLKQGHDAQKVYDGLLVRANAAKAETEGALSGIKSNLKGVEDTLTSLRGFDQSI
DEGKKLADAAIARLPAINGTIQQAVLKNGQTLNLLEDFSQDYTNTLATIAELETEVAGLE
SGVGSLEPSSGLVTDATKLRQDLEGMAQRAGAMQGKVKGELASSQTLQMDAEQAVSDAEA
AHDNAMDTRDAVATTLQKVSDLLNMIGQSGSLDEERIAELERSLADAHKRVDQDLKPRLH
NMEDLEAAQRRLLGGLNVDIDKILYDINNLEVILKSVPSGCYNTPPIELA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgacctgggtccacttctgcgggattctagctttcgttgtggtcgtccacgggacgttt
acacagcacaactccggtcaacgatgcgactgcaaccggaagtcgcgctactgcgtgctg
gacgcggaggggatgcgctgcttggattgccgcggcaacaccaccgggcggcgctgtgag
cactgtgaagtcggcttcttccgctgggtacccgggcagcactgcagcccctgccggtgc
agctcctcagggtctgtggcctccacgtgtgacagcagggggcgctgcagctgtaaagaa
ggggtaacgggagacaaatgcgaccgctgcaccaacggagctccactcggatccaacggc
tgcacaggagctgtcctcagagacgagcctgtggatcggtccacttcctgtttctgccat
ggccacgcctccagctgtggtgtcgcccatggatacgctgcccaccccatcgagtccaaa
ttcactgatgggccggagggctggcagttgagcacgggtcgcggggtgctgacgtcacag
gtccagttccgctgggtgccgatccacgaggacctggaagtcatctctcagaacagcctg
cccacctacctcaacgcccctgctcgttacctcggtaaccaggtgctgagctatggccag
aacctgagcttctccctgcgtctggaccgcggcgtgcgccacccctccaccaacgacgtg
gttctggagggggccggcctccgggtgggagcagcgctgggggagctgaggtccatcatc
ccctgcggacagaagatccccttcagcttcaggctggatgagcgttcaggcagcaagtgg
aggcccaagctctcccagctgcagttccagtccctcctacacaacctcacggcgatcaag
atccgggccacgttcggagaggacgggcgcggttaccttgacaacgtcagcctgatgtca
gcgcgcggcggcggcgccggtggccccgccccctgggtgcagagctgcgtgtgtgagccg
gggtaccagggcgcgcactgcggccgctgcggggccgggttcaaacgcacgtcccccgcc
gacggggccttcggcgcctgcgaaccatgtgactgtaaggcgggaagctgtgaccccgac
acaggcgactgcttctctgccgacgagacacagaggtcccaggcctgtcccggtggttac
tatagcgacccgaaccagccgctgtcctgcgtgaggtgcccgtgtgccgggggcgtgggg
tgctccctgaagcccggctcgctggaggtccagtgtgacaactgcccccctggggtcact
ggcttccgctgccagctgtgcggggacggtctgtacggcgaccccctgggggagaggggg
ccgcagaggccctgccaggcctgctcctgccccgggcgcggggactccctggagggcacc
cactgcgacccgttcagcggggagtgtctgaagtgtgtggacgagagccgggacgggcag
cccaaggcctgccccgagggctcctaccacagccgcctgacggacgcgtgcgaggcctgc
aaatgtgacccgattggctcgttgttcagcctgtgcagcgcggagggccagtgtacctgc
agggagggctaccagggacgcaggtgtcaccgctccacctgtccgtcatgcttccagcca
atcatctcccaggtggagggctacgccgctaaactccgggagctcgagaagctgttctcc
aacctgggcggaggtaccggctccgacagcacccaccagctggacaccgcccttaaagcc
gccggcgcgctggtgacagatctcacaaataccgtggacacactcaaagtgtcggagcgg
aatctccagttgcgtgtgaccagcattagcgaccagcagctggaagagagccaggacgtc
cagagtctgacgcgcgccgccgcccggctccgccaggagcaggcggcctacgacacgcgc
agcgcggcggtgcagacgctcatcgaccagatgacgttcacgctgaaagacgccaaggcc
aagatccaggcagcggatcttcctcagggtgacgaggcccaggccgtgagcaacaacctc
ttctccaccctgatcaccaaggccaaagagctggctgagagacacctggtgaaggcggag
gaggtggagcagagtgccggggacgccctcgccgactctgggaacagcctggctctcatg
aggggcctcatgtcccgggagaaccaggtcaaggagctgctgggaaacctgaacaacatg
tatgacaagacctccggcaaggtgaagaccatggagaaccaggctactcgcctgagcagc
caggctggggttgagagccaactggctggggacatgttgaagcagatcaccggtatggag
ccggccatcggccctcctatccaggtagatgatctggtgtcgagactggacaccctgacg
gaccaggtctcgcccaacatcttggcctcccgagcgctcctgaaggatgtggaccaggac
aaggatctggcgcggggcctcctgaaacaaggccacgatgctcagaaggtgtacgacggt
ctgctggtcagggccaatgctgccaaggccgaaaccgaaggggcgctgagtggaatcaag
agcaacttgaaaggagtggaagacaccctgacttcactgagagggtttgaccagagcatc
gacgaaggcaagaagctggccgacgcagccattgccagactcccggccatcaacggcacc
attcagcaggcggtcttgaaaaacggccagaccctgaacctcctggaggacttctcccag
gactacaccaacaccctggccaccatcgcagagctggagacagaggtggccggcctggag
agcggcgtgggttccctggagcctagcagcggcctggtgacagatgccaccaaactgagg
caggatctggaaggtatggcgcagcgggccggagccatgcagggaaaggtgaagggggag
ctggccagctcgcagacgctgcagatggacgccgagcaggctgtctcggatgctgaggct
gcccatgacaacgccatggatacgagggatgccgtggcaacaactttgcagaaggtcagc
gacttgctcaacatgatcggccagtccggcagccttgacgaagagcgcatagctgagctg
gaacgctccctggccgacgcccataagagagtggaccaggacctcaagccccgcctccac
aacatggaggacctggaggcggcgcagcggcgcctcctggggggtctgaacgtggacatc
gacaaaatcctgtacgacatcaacaacctggaggtcatcctcaaatctgtgccctcaggc
tgctacaacaccccccccatcgagctggcttaa
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