KEGG   Gadus morhua (Atlantic cod): 115549508
Entry
115549508         CDS       T10832                                 
Name
(RefSeq) collectin-12-like
  KO
K10062  collectin sub-family member 12
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04145  Phagosome
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115549508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115549508
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:gmh04091]
    115549508
Membrane trafficking [BR:gmh04131]
 Endocytosis
  Phagocytosis
   Opsonins
    115549508
Lectins [BR:gmh04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   115549508
SSDB
Motif
Pfam: Collagen Lectin_C Filament Ly49 Tetraspanin
Other DBs
NCBI-GeneID: 115549508
NCBI-ProteinID: XP_030220626
Ensembl: ENSGMOG00000007124
LinkDB
Position
8:8485924..8512999
AA seq 744 aa
MKDDFADDEEVHSFGYKRFGIQEGTECTKCKNHWALRAAIALLYVLCALLTIAVAVLGYK
VVQRMDDVTLQNSAEHHINEKSANATSAIQTFQSNLQTLQSQLHDIAQRAGANQALLDEL
QETGEVTQRGHVSLQGDVDGNAASLLRVNQTLTSHRDTIEDLQKDTARLQSALQGQARDQ
GEAAVGVNALNITQAQQRGLLSNLQKTVEATGRAVQKLKNDYQGLQQTARQTQADAVLLK
EKVQNLHVVAANNSAQARSDGEALEDMGSQLGSLALQIQNTSSVTEGHDQSLRELMDRQR
DHDHDKSAQFDRLEVRLDRQESGMNRVIGNVSFASQLLGAISTDLNGLRTCAETVAHHAD
LLLALNGSVSEAKAYSVGLRTQQDELAGRLDREVSNLTMVMAEMKLVDSQHSNLITNFTI
LQGPPGPKGPRGDRGPQGPVGTSGQKGERGDKGMTGGRGPEGQKGSAGLSGVPGSKGATG
DRGVPGAKGSRGLSGRPGPAGEKGESGTPGANGWEGQKGTAGLQGPQGPRGPLGAPGSEG
PRGHPGLPGPPGRPADPPVQRQPPPHVPPHTPQQDKPPPPSKPVPVPETPMVSPHVQPPA
GPTPLPGCPLEWISFEDSCYYFSSGAQKLNFTETKIFCTNMSSSMVMIKSNEEQEWIKKQ
IARKGFFWLGLTDMETENVWKWVDGTLPVFTKWKPGQPDNWDQGYSKGEDCAGLIQAAYW
NDFFCRERISFICEQPSSWGLPVL
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgaaagacgactttgctgatgacgaggaggtccattcctttggctacaagaggtttgga
atccaagagggtacagagtgcaccaagtgtaagaatcactgggcgttgagagcagctata
gccctgctctacgtgctgtgtgccctgctcaccatagcggtggccgtgctcggatacaaa
gtggtgcagaggatggatgacgttacgctacaaaactctgcagagcaccacatcaacgag
aaatcggcaaacgccaccagtgccatccagaccttccagtccaacctccagaccctacag
agccagctgcacgacatcgcccagcgggccggcgccaaccaggccctgctggacgagctc
caggagacaggcgaggtcacgcagaggggccacgtgtccctgcagggcgacgtcgacggc
aacgcggcgtccctgctccgggtcaaccagacgctgacctcccacagagacaccatcgag
gacctgcagaaggacacggccaggctgcagtcggcgctccagggccaggccagggaccag
ggcgaggcggcggtgggcgtcaacgccctgaacatcacccaggcccagcagcgcggcctg
ctcagcaacctgcagaagacggtggaggccacggggcgggccgtgcagaagctgaagaac
gactaccagggcctgcagcagacggcccggcagacgcaggccgacgccgtcttgctgaag
gagaaggtccagaacctccacgtggtggcggccaacaactcggcgcaggcccgctccgac
ggagaggccttggaggacatgggctcccagctgggctcgctggcgctgcagatccagaac
acgtcgtcggtgacggaggggcacgaccagagcctccgggagctgatggaccgccagcgg
gaccatgaccacgacaaatcggcgcagttcgaccgcttggaggtgcggctggaccggcag
gagagcggcatgaaccgcgtgatcgggaacgtgagcttcgcctcgcagctcctgggcgcc
atcagcaccgacctcaatggcctgcggacctgcgcggagacggtggcccaccacgcggat
ctgctgctggccctgaacgggagcgtgagcgaggccaaggcgtacagcgtggggctgcgg
acccagcaggacgagctggccggccggctggatcgagaggtcagcaacctgacgatggtg
atggcggaaatgaagctggtggacagccagcactcaaacctcatcaccaatttcaccatc
ctgcaaggacccccaggtccgaaaggccccagaggtgacagggggccccagggcccggtg
ggcacgtcgggacagaagggtgagagaggggacaaaggcatgacgggcgggcggggacct
gaaggacaaaagggttctgcaggactatccggggtgccgggttctaagggagcgaccggg
gaccggggcgtccccggagccaaagggtcccggggattgtcaggtcggccaggccctgcg
ggggagaagggggagtccggcactccgggggctaacggctgggaaggacagaaggggacg
gcgggattacaagggcctcaggggccgcgaggacctctcggggctccggggtcggaggga
ccgcgcgggcaccctggtctgccggggccaccggggcgtccggcggatccccctgtgcaa
cgccaacccccgccccatgtacccccacacactccccagcaggacaaaccccctccaccc
tccaagccagtcccagtaccagagacccccatggtgtccccccacgtgcagccccccgct
ggccccaccccactacctggctgccctcttgaatggatttcctttgaggacagctgctac
tacttctcctctggggctcagaagttaaattttacagaaaccaagatattctgtaccaac
atgtcatcctctatggtcatgatcaaaagcaacgaggagcaggaatggataaaaaagcag
attgccagaaagggcttcttctggctgggcttgacagacatggagacggagaacgtgtgg
aagtgggtcgatgggaccctacccgttttcacgaagtggaaacctggccagcctgacaac
tgggatcagggctactcaaagggagaggactgcgcagggctcatccaagcggcctactgg
aacgacttcttctgcagggaacgcatcagcttcatctgtgaacagccttccagctggggg
ttgcctgtcttatag

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