Gadus morhua (Atlantic cod): 115549508
Help
Entry
115549508 CDS
T10832
Name
(RefSeq) collectin-12-like
KO
K10062
collectin sub-family member 12
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115549508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115549508
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gmh04091
]
115549508
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Phagocytosis
Opsonins
115549508
Lectins [BR:
gmh04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
115549508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Filament
Ly49
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
115549508
NCBI-ProteinID:
XP_030220626
Ensembl:
ENSGMOG00000007124
LinkDB
All DBs
Position
8:8485924..8512999
Genome browser
AA seq
744 aa
AA seq
DB search
MKDDFADDEEVHSFGYKRFGIQEGTECTKCKNHWALRAAIALLYVLCALLTIAVAVLGYK
VVQRMDDVTLQNSAEHHINEKSANATSAIQTFQSNLQTLQSQLHDIAQRAGANQALLDEL
QETGEVTQRGHVSLQGDVDGNAASLLRVNQTLTSHRDTIEDLQKDTARLQSALQGQARDQ
GEAAVGVNALNITQAQQRGLLSNLQKTVEATGRAVQKLKNDYQGLQQTARQTQADAVLLK
EKVQNLHVVAANNSAQARSDGEALEDMGSQLGSLALQIQNTSSVTEGHDQSLRELMDRQR
DHDHDKSAQFDRLEVRLDRQESGMNRVIGNVSFASQLLGAISTDLNGLRTCAETVAHHAD
LLLALNGSVSEAKAYSVGLRTQQDELAGRLDREVSNLTMVMAEMKLVDSQHSNLITNFTI
LQGPPGPKGPRGDRGPQGPVGTSGQKGERGDKGMTGGRGPEGQKGSAGLSGVPGSKGATG
DRGVPGAKGSRGLSGRPGPAGEKGESGTPGANGWEGQKGTAGLQGPQGPRGPLGAPGSEG
PRGHPGLPGPPGRPADPPVQRQPPPHVPPHTPQQDKPPPPSKPVPVPETPMVSPHVQPPA
GPTPLPGCPLEWISFEDSCYYFSSGAQKLNFTETKIFCTNMSSSMVMIKSNEEQEWIKKQ
IARKGFFWLGLTDMETENVWKWVDGTLPVFTKWKPGQPDNWDQGYSKGEDCAGLIQAAYW
NDFFCRERISFICEQPSSWGLPVL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgactttgctgatgacgaggaggtccattcctttggctacaagaggtttgga
atccaagagggtacagagtgcaccaagtgtaagaatcactgggcgttgagagcagctata
gccctgctctacgtgctgtgtgccctgctcaccatagcggtggccgtgctcggatacaaa
gtggtgcagaggatggatgacgttacgctacaaaactctgcagagcaccacatcaacgag
aaatcggcaaacgccaccagtgccatccagaccttccagtccaacctccagaccctacag
agccagctgcacgacatcgcccagcgggccggcgccaaccaggccctgctggacgagctc
caggagacaggcgaggtcacgcagaggggccacgtgtccctgcagggcgacgtcgacggc
aacgcggcgtccctgctccgggtcaaccagacgctgacctcccacagagacaccatcgag
gacctgcagaaggacacggccaggctgcagtcggcgctccagggccaggccagggaccag
ggcgaggcggcggtgggcgtcaacgccctgaacatcacccaggcccagcagcgcggcctg
ctcagcaacctgcagaagacggtggaggccacggggcgggccgtgcagaagctgaagaac
gactaccagggcctgcagcagacggcccggcagacgcaggccgacgccgtcttgctgaag
gagaaggtccagaacctccacgtggtggcggccaacaactcggcgcaggcccgctccgac
ggagaggccttggaggacatgggctcccagctgggctcgctggcgctgcagatccagaac
acgtcgtcggtgacggaggggcacgaccagagcctccgggagctgatggaccgccagcgg
gaccatgaccacgacaaatcggcgcagttcgaccgcttggaggtgcggctggaccggcag
gagagcggcatgaaccgcgtgatcgggaacgtgagcttcgcctcgcagctcctgggcgcc
atcagcaccgacctcaatggcctgcggacctgcgcggagacggtggcccaccacgcggat
ctgctgctggccctgaacgggagcgtgagcgaggccaaggcgtacagcgtggggctgcgg
acccagcaggacgagctggccggccggctggatcgagaggtcagcaacctgacgatggtg
atggcggaaatgaagctggtggacagccagcactcaaacctcatcaccaatttcaccatc
ctgcaaggacccccaggtccgaaaggccccagaggtgacagggggccccagggcccggtg
ggcacgtcgggacagaagggtgagagaggggacaaaggcatgacgggcgggcggggacct
gaaggacaaaagggttctgcaggactatccggggtgccgggttctaagggagcgaccggg
gaccggggcgtccccggagccaaagggtcccggggattgtcaggtcggccaggccctgcg
ggggagaagggggagtccggcactccgggggctaacggctgggaaggacagaaggggacg
gcgggattacaagggcctcaggggccgcgaggacctctcggggctccggggtcggaggga
ccgcgcgggcaccctggtctgccggggccaccggggcgtccggcggatccccctgtgcaa
cgccaacccccgccccatgtacccccacacactccccagcaggacaaaccccctccaccc
tccaagccagtcccagtaccagagacccccatggtgtccccccacgtgcagccccccgct
ggccccaccccactacctggctgccctcttgaatggatttcctttgaggacagctgctac
tacttctcctctggggctcagaagttaaattttacagaaaccaagatattctgtaccaac
atgtcatcctctatggtcatgatcaaaagcaacgaggagcaggaatggataaaaaagcag
attgccagaaagggcttcttctggctgggcttgacagacatggagacggagaacgtgtgg
aagtgggtcgatgggaccctacccgttttcacgaagtggaaacctggccagcctgacaac
tgggatcagggctactcaaagggagaggactgcgcagggctcatccaagcggcctactgg
aacgacttcttctgcagggaacgcatcagcttcatctgtgaacagccttccagctggggg
ttgcctgtcttatag
DBGET
integrated database retrieval system