Gadus morhua (Atlantic cod): 115549569
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Entry
115549569 CDS
T10832
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04217
Necroptosis
gmh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115549569
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115549569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115549569
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
115549569
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
115549569
Multi subunit type E3
LUBAC complex
115549569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
Zn_ribbon_RanBP
ANCHR-like_BBOX
zf-B_box
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
115549569
NCBI-ProteinID:
XP_030220703
LinkDB
All DBs
Position
8:complement(1080535..1110070)
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AA seq
1128 aa
AA seq
DB search
MEDSPVVKQKGQPMATLSEQLHEVRMQAELCLYSGGSPVEVRAGVYAMAHLALPPCSKYC
LVSAETMVMENSFGSNRKETLASLQRLSTALNILEKYGCNLTNPNRPKYWRTVKHNNPVF
RATVDAIQGGRAVLCLYGYSHQQMDGLSFPEDVVEPDVGQVARVTLEVMSLRMELDLLIK
EVHPHPEFYERIIPTLRHKDVGLNTDAVVISSPSSSSSSSSSSSLGPRDGAAKSLGFPLY
QQDPQARHSPRAFQPLTPGRNATANASTSTHQGPASLSSTRPPENCTICGIFSVAFHCPA
CAQWLCTECDRLYHSYPERANHQRSPVTSSSSAKSRKSNSSSTWHCHHCTKVNSIRDVLC
ETCERPRLASSSTAAEEAQPSTTTEWQCKSCTVVNAASSILCEVCERPRLATRPPVTPTH
PAVTPPRPPAPVLGMPGDPDNQWVCQFCTYLNYSPSTVCEMCDLARPEPAPMPVKLRPPS
PVRRVPALPVKPKNPPPEEPEARRQRLLQEEGLRLIQLIRDGEKRDLSPEEVYTGMRVAG
DTSVLPCEWLRDELPLLLDHICELVANSAPPGSSASSTQPTTELTNGLCDPPTDDGGGGG
PDSGPADGGVTLQLSRAEAKQAWLTAGGDTERAARQALRDRGLKVKELSSLGFEDEQLCH
EVLRQSRGELHGALALLQRPLLEPFHQRMWSDKPEQPLDVRHPDKQRTCRRLLAVYDLPS
WGRCELALSLLLESNATYCLEDVVQAVRESHDREFIKRVLAKECPICLSIFPHSKMQSLT
SCQCSVCCGCFRQHFTIVVRDKHIRDMVCPVCWEPDINDPEHLNSYFSTLDIQLRECLEP
EVYELFHKKLTEQALIKDPKFLWCSHCSYGFIYDGHQLKVTCFQCRKSFCAQCKKPWESQ
HAGLSCEQYQSWKRENDPEYQRQGLAGYLRDNGITCPNCRFQYALSKGGCMHFCCSQCRY
QFCSGCNNPFHTTCAVDQCSVSGLHAHHPRDCLFYLRDWEPNRLQALLQNGVAFNTDPPP
GTQTGLCGVIEQKDEAAQQSDAACGAQTQPGHAGLCEKHYREYLVSLINGYSIDPAPLFN
ANELGLACRRYQVEDARGEGEDDFGYYNRLLEKLMHEVPLGDKVPRNK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcccagtggtgaaacagaaggggcagccgatggccacgctgtcggagcag
ctccacgaggtgcgcatgcaggccgagctgtgtctgtactccgggggctcgccggtggag
gtccgtgcaggcgtctacgccatggcccacctggccctgcccccctgctccaagtactgc
ctcgtctccgccgagaccatggtcatggagaacagcttcggcagcaacaggaaggagacc
ctggcgtccctccagaggctgtccacagcactgaatatcctggagaagtacggctgtaat
ctgaccaatcccaaccggccaaagtactggaggacggtgaagcacaacaacccggtgttc
cgggcgaccgtcgacgctatccagggtggccgagcggtgctctgtctctatggttactcc
caccagcagatggacggcctcagcttccccgaggacgtggtggagcccgacgtggggcag
gttgccagggtaaccctggaggtgatgagcctgaggatggagctggacctgctcatcaag
gaggttcatccacaccccgagttctatgagaggattattcctacactgagacacaaggac
gtcggcctcaacacggacgcggtggtcatctcctcgccctcgtcctcgtcctcgtcctcc
tcctcttcctccctgggtccccgggacggggcggccaagtccctggggttccccctctac
cagcaggacccccaggcccggcacagcccccgcgccttccagcccctcacgcccggacgc
aacgccaccgccaacgcctccacctccacccaccaggggcccgcctccctgtcctccacc
cggcccccagagaactgcaccatctgtgggatattctcggtggcgttccactgccctgcg
tgcgcccagtggctgtgcaccgagtgcgaccggctgtaccactcctacccagagagagcc
aaccaccagcgcagcccggtcacctcgtcctcatcggctaaaagcagaaagagcaacagc
tcctccacctggcactgccaccactgcaccaaagtcaactccatccgcgatgtgttgtgt
gagacatgcgagcgcccccggctggcctcgtcgagtactgcagccgaggaggctcagccc
agcaccaccacagagtggcagtgtaagagctgcaccgtggtgaacgcggccagcagcatc
ctgtgtgaggtctgcgagcggccgcgcctcgccaccaggccccccgtcaccccaacgcac
cccgcagtcaccccgccgagaccccccgcccccgtcctgggcatgccaggggaccccgac
aaccagtgggtgtgccagttctgcacctacctcaactactcgccctccaccgtgtgcgag
atgtgcgacctggcccgccccgagccggcgcccatgcccgtgaagctccgccccccgtcg
cccgtgcggcgcgtcccggcgctgcccgtcaaacccaagaacccgcccccagaggagccg
gaggcgcggcggcagcgtctgctccaggaggagggactccggctgatccagctcatcagg
gacggggagaagcgggacctgagccctgaggaggtgtacaccggcatgcgggtggccggc
gacaccagcgtcctgccctgtgagtggctgagggacgagctccccctgctgctggaccac
atctgtgagctggtggccaactccgcccccccgggaagctccgcctccagcacccagccc
accacggagctcactaacggcctgtgtgatccgcccacggacgacggcggcggcggcggc
cccgactccggccccgccgacgggggggtgaccctgcagctgtcccgggcggaggccaag
caggcctggctgacagcagggggcgacactgagcgggctgcccggcaggccctccgagac
cgcggcctcaaggtgaaggagctgagctcgctgggcttcgaggacgagcagctgtgccac
gaggtgctccggcagagccgtggggagctgcacggcgccctggccctcctgcagcgcccc
ctgctggagcccttccaccagcgcatgtggagcgacaagcccgagcagcccctggacgtg
cggcaccccgacaagcagcgcacctgcaggcgtctgctggcggtgtacgacctgcccagc
tggggtcgctgcgagctggcgctgtccctgctgctggagagcaacgccacctactgcctg
gaggacgtggtgcaggcggtgcgcgagtcccacgacagggagttcatcaagagggtcctg
gccaaagagtgtcccatctgtctgtccatcttccctcacagcaagatgcagtccctgacg
tcgtgccagtgctcggtgtgctgcggctgcttccgccagcacttcaccatcgtggtgcgg
gacaagcacatccgcgacatggtgtgccccgtgtgctgggagcccgacatcaacgacccc
gagcacctcaacagctacttctccaccctggacatccagctgcgtgagtgtctggagccc
gaggtgtacgagctgttccacaagaagctgaccgagcaggcgctcattaaggaccccaag
ttcctctggtgcagccactgttcctacggcttcatctacgacggccaccagctcaaggtc
acctgctttcagtgtcgcaagagcttctgcgcccagtgcaagaaaccttgggagtcccag
catgccggcctgtcctgtgagcagtaccagtcctggaagagggagaacgacccggagtac
cagagacagggcctggcgggatacctccgggacaacgggatcacttgcccaaactgtcgc
ttccagtacgctctgtccaagggcggctgcatgcacttctgctgctcccagtgccgctac
cagttctgcagcggctgcaacaaccccttccacactacctgcgccgtggaccagtgcagt
gtgtcagggctgcacgcacaccaccccagagactgcctcttctacctcagagactgggag
cctaacagactgcaagccctgctgcagaacggagtggctttcaacacagaccctcctccc
gggactcagacaggtctgtgcggggtgatcgagcagaaggacgaggcggcgcagcagtcg
gacgcggcctgcggggcccagacccagccgggccacgccgggctctgcgagaagcactac
cgggagtacctggtgagcctgatcaacggctactccatcgacccggcgccgctgttcaac
gccaacgagctggggctggcctgccggcgctaccaggtggaggacgcgcgcggcgagggc
gaggacgacttcggctactacaaccgcctgctggagaaactgatgcacgaggtcccgctg
ggagacaaggttccacggaacaagtga
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