Gadus morhua (Atlantic cod): 115549576
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Entry
115549576 CDS
T10832
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115549576 (fubp1)
03041 Spliceosome [BR:
gmh03041
]
115549576 (fubp1)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115549576 (fubp1)
Spliceosome [BR:
gmh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115549576 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
KH_KHD4_2nd
Secretin_N
DUF5784
Motif
Other DBs
NCBI-GeneID:
115549576
NCBI-ProteinID:
XP_030220715
Ensembl:
ENSGMOG00000003370
LinkDB
All DBs
Position
8:1699914..1718366
Genome browser
AA seq
677 aa
AA seq
DB search
MADYSNVAPPSSNAPAGMNDAFKDALQRARQIAAKIGVDGVAAPTTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVAPSDPFSGGMGGMGGMGGPPRSASEDFKVPDGMVGFIIGR
GGEQISRMQQESGCKIQIAPDSGGMPDRSVTLTGSPDAIQAAKRLLTEIVEKGRPTPAFH
HNEGPGMSVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQEGPQNTGADKPLRIS
GEAFKVQQAKELVMELIRDQGFREQRGEYGSRLGGGDSLDVSNIEVPVPRFAVGIVIGRN
GEMIKKIQSDTGVRIQFKQDDGTTPERIAQIMGPPEQAQHAADIISDLLRSVQAGGPPGH
GGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRN
PPPNADPNIKMFTVRGSPQQIDYARQLVEEKIGCPVTPMGGPHGPPGPHGGPGPHGPPGP
PGPPGAPMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGFPHWQQGQPDPSHDTCPDKAAA
DANAAAWAAYYSQYGQQPQAPMTPTGGAPGTTQSNGQGGSQAPGQSGQADYTKAWEEYYK
KTGQQSQQPQDYTKAWEDYYKKQGQAAPQATAAATAQPGGQPDYSAAWAEYYRQQAAYYG
TASPQAMGGAPQAPQGQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcagactactcgaacgtggctcccccgtcctctaacgcgcccgccgggatgaacgac
gctttcaaagacgcgcttcaacgagcgagacagatcgcggctaagatcggagtcgacggc
gttgctgcacctacaacaaacgagtttggctacggaggccagaaaaggcccctggaagat
gctggtgggtattttcccatgcctaacctcaatatagaccaaccagagacaaagaaagtg
gcacctagtgaccccttctcgggtggaatgggcggaatgggaggaatgggaggtccccca
aggtccgcgtcggaggacttcaaggttcccgatggcatggttggattcattattgggaga
ggcggtgagcagatatcccgtatgcagcaggaatctggatgtaaaatacagatcgcccca
gacagcggcggcatgcccgatagatcggtgacattgacaggatccccagacgccatccag
gctgcgaagaggctcctcacagagattgtggagaagggtcgcccaacaccagcattccac
cacaacgagggccctggcatgtcagttcaggagatcatggtccctgcttctaaagccggc
ttggtcattggcaagggaggggaaaccattaagagccttcaggagagagccggagttaag
atggtcatgatccaggagggacctcaaaacacgggcgcagacaaacctctccggatttcg
ggggaagctttcaaagttcagcaagccaaagagttggtgatggagctgatcagagaccag
gggttcagagagcagaggggggagtatggctctaggttggggggtggtgacagcttagat
gtgagtaacattgaagtcccagtgccgaggttcgcggtcggcatcgtcatcggtaggaac
ggcgagatgatcaagaagatccagagcgacacgggcgtccgcatccagttcaaacaagac
gacggcaccacgccggagaggatagcccagatcatgggcccgcccgagcaggcccagcac
gcggccgacatcatctccgacctcctgcgtagcgtccaggccggcgggcccccgggtcac
ggggggggcaggggacggggccgcggacagggcaactggaacatgggcccccccggaggc
ctgcaggagttcaccttcactgtccccaccatgaagaccggcctcatcatcggcaagggg
ggcgagacgataaagggcatcagccagcagtcgggggcccggatcgagctccagaggaac
cccccgcccaacgccgaccccaacattaagatgttcaccgtgcgcggctccccccagcag
atcgactacgccaggcagctcgtggaggagaagatcgggtgtccggtcaccccaatggga
ggaccccatggtccacctgggcctcacggaggacccggcccccacggccccccagggcca
ccaggcccacccggtgctccaatggggccctacaacccgggaccctacaaccaggggccc
cccggtccacatggtcctccggccccctaccagcctcagggatggggcaacggtttcccc
cactggcagcagggccagcctgaccctagtcacgatacatgtccagacaaagctgctgct
gatgccaacgctgcggcgtgggcggcgtactactcccagtacggccagcagccccaggcc
ccaatgacccccaccggcggagcccccggaaccacgcagtccaacggccaaggtggctcg
caggcgcccggtcagagcggacaggcagattacaccaaggcctgggaggaatattacaag
aaaacgggccaacagagtcagcagccccaggactacacgaaagcatgggaagattactat
aagaagcaaggtcaagccgcgccccaggccacggcggccgccaccgcccagcccggaggc
cagccggactacagcgccgcctgggccgagtactaccgccagcaggccgcctactacggc
acggccagcccccaggccatgggcggagccccccaagccccccagggccagtaa
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