KEGG   Gadus morhua (Atlantic cod): 115549625
Entry
115549625         CDS       T10832                                 
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03030  DNA replication
gmh03410  Base excision repair
gmh03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115549625
   03410 Base excision repair
    115549625
   03450 Non-homologous end-joining
    115549625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gmh03032]
    115549625
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115549625
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115549625
DNA replication proteins [BR:gmh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    115549625
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     115549625
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     115549625
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115549625
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 115549625
NCBI-ProteinID: XP_030220802
Ensembl: ENSGMOG00000017701
LinkDB
Position
8:21726839..21730556
AA seq 348 aa
MGITKLADLIRIAAPDAISYKDISDYTGKVIALDTSIIMNQFRTAVPKLNFLSPMTGIFF
RTLTFLEHDIKPVFVFDGKPPGEKLAVLERRAETAGWGSPNRSGAASSQTKECLQLLKLL
GVPILQAPGDGEALCARLVSEGTADAVASEDMDTLPFGAGLLIRQLNAKKDSEVIEYSLP
KILEKLKLSQEEFVDLCILLGCDYCDKIVGLGPKRALKLIQEHHTIEQVVLNINRKTHPV
PHFWQYQEARKLFLEGARTVAQDLVWTEPDEEGLVQLLCTTHHVKEPRIRGRMVKFREAR
EKKRKEREERKSGPSRQMRMEDFFRVTRKRKQQMDGAEAVPSKASKKT
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggggatcacaaaactggccgatctgattcgcatcgcagcacctgatgcgatctcttat
aaagatataagtgactacacagggaaggtgattgcgctggatacttctattattatgaac
cagtttcggactgctgtacctaaactcaactttctaagtcctatgacaggtatcttcttc
cgaacgctcaccttcctagaacatgacatcaagcctgtgtttgtgtttgacggcaagccc
cctggggagaagctggctgtgctggagaggagagcagagaccgctggatggggctcccca
aaccgctctggtgctgcatcatcacagaccaaggaatgccttcagctcttgaagcttcta
ggtgtaccaatccttcaggccccgggggatggggaggctctgtgtgcgcgcctcgtgagt
gaaggtactgcggacgcggtggcgtcagaagacatggacaccctgccctttggagcaggc
ctcctcattcgtcaactgaacgcaaagaaggacagtgaggttattgaatattccttaccc
aagatccttgaaaagctgaaattaagccaggaggagtttgtggacctgtgtatcctgctg
ggctgtgactattgcgacaagatagtgggtttaggccccaagagagccctgaagctgatc
caggaacatcacaccatagagcaagtggttctgaatatcaacagaaagacacatcctgtt
cctcatttctggcagtaccaagaagcccggaagttgttcctggagggggcccgcaccgta
gcccaggatctggtgtggacggagccggatgaggagggcctggtgcagctcctctgcacc
acacatcatgtcaaagagcccaggatccgcgggcgaatggttaaattccgtgaggcgcgg
gagaaaaagagaaaagaaagggaggagaggaagagcggccccagcagacagatgcgcatg
gaggacttcttcagagtcaccaggaagaggaaacagcagatggatggtgccgaagctgtt
cccagcaaagcaagtaaaaaaacctaa

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