Gadus morhua (Atlantic cod): 115549626
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Entry
115549626 CDS
T10832
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115549626 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115549626 (gtf2b)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
115549626 (gtf2b)
Prokaryotic type
Archaeal type
TFB
115549626 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
115549626
NCBI-ProteinID:
XP_030220804
Ensembl:
ENSGMOG00000017538
UniProt:
A0A8C4ZR35
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All DBs
Position
8:21611790..21623039
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AA seq
318 aa
AA seq
DB search
MASTSRGEALALPRVTCPNHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNE
KATKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKHVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAPD
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacaagccgcggagaggccctggcattacccagagtgacgtgcccaaaccac
cctgatgccctgctagtggaggactacagagccggggacatgatctgccccgagtgcgga
cttgttgtcggcgaccgtgtgatcgacgtgggctcagaatggaggaccttcaccaatgag
aaagccaccaaagacccgtccagagtgggagacgcccagaaccccctgctgaacggagga
gacctcaccaccatgatcagcaagggcaccggcgccgccagcttcgacgagtttggcaac
tccaagtaccagaaccgccgcaccatgagcagctcggaccgcgccatgctgaacgccttc
aaggagatcaccaccatggcggaccgcatcaacctgcccaggaacatcatcgaccgaaca
aataacttattcaagcaagtttacgaacagaagagcctgaaaggtcgtgccaatgacgcc
atcgcctcggcctgcctctacatcgcctgcagacaggaaggagtccccaggacatttaaa
gagatctgcgccgtgtcccgcatctccaagaaggagatcggccgctgcttcaagctgatc
ctgaaggccctggagaccagcgtggacctcatcaccaccggggacttcatgtcccgcttc
tgctccaacctgggcctgcccaagcacgtgcagatggccgccaccttcatcgcccgcaag
gcggtggagctggacctggtgcccggccgcagccccatctccgtggccgccgccgccatc
tacatggcctcccaggcctcggccgaaaagaagacccagaaggagatcggagacatcgcc
ggcgtggcagacgtgacgatccggcagtcctaccggctgatctacccccgcgccccggac
ctcttcccccccgacttcaagttcgacacacccgtggacaagctgcctcaactgtga
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