Gadus morhua (Atlantic cod): 115549634
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Entry
115549634 CDS
T10832
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115549634
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115549634
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115549634
NCBI-ProteinID:
XP_030220813
Ensembl:
ENSGMOG00000019808
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All DBs
Position
8:complement(21693939..21695382)
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AA seq
258 aa
AA seq
DB search
MSKPLGHIKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGAEWKLLSDPTKRPFIDE
AKRLRAQHLQEHPDYKYRPRRKPKSLLRRDRFVFPLPFLGDTAEHLKGFPADTSFLSADK
ARALLSPAAPSFSFLDPISAHFSTGAVQRLNDLPHTLPLGCLPYANTFGYHQTGPMGSLS
CPGQHSHTHLSPSSPGYSPGYVVPCGCSSAWSTAAGLQPQVAYILFPGGLHAKKGLLDPY
TSAGSGLGRSAPGDVMHT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacctctaggtcacatcaagagacccatgaacgcgttcatggtgtggtccagg
ggccagaggcggaagatggccctggagaaccccaagatgcacaactcggagatcagcaag
cggctgggcgccgagtggaagctgctctccgaccccaccaagcggccgttcatcgacgag
gccaagcggctgcgcgcccagcacttgcaggagcacccggactacaagtaccgtccccgg
aggaaacccaagagcctgctgaggagagaccgcttcgtgtttcccctgcctttccttggg
gacaccgcggagcatttgaaaggatttccagcggacacttctttcctcagcgcagataaa
gcccgggctctgctgtcccccgccgccccgtccttctccttcctggaccccatctcagcg
cacttcagcaccggagctgtccagcggctcaacgacctgccacacactctgccgctcggg
tgcctaccctacgcgaacacttttggataccaccagaccggaccgatggggagtttgagt
tgcccggggcagcacagccacacgcacctgtccccgagcagtccagggtacagtcccggg
tatgtggttccgtgcggctgcagcagcgcgtggtcaaccgccgccgggctgcagccgcag
gtcgcctatatcctgttccccggaggactgcatgccaagaaggggctgctggacccctac
acctccgcagggtcaggcctgggacgcagtgcaccaggggacgtaatgcacacatga
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