Gadus morhua (Atlantic cod): 115549644
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Entry
115549644 CDS
T10832
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03250
Viral life cycle - HIV-1
gmh04623
Cytosolic DNA-sensing pathway
Brite
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115549644
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115549644
NCBI-ProteinID:
XP_030220861
Ensembl:
ENSGMOG00000015141
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Position
1:complement(13256069..13270680)
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AA seq
517 aa
AA seq
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MAGPEDTDIECMEAAYKVFNDPIHGHIALHPLLVKIIDTPQFQRLRNIKQLGGAYYVFPG
ASHNRFEHSIGVGYLAGKLAKSLQNKQPGLNITKRDILCVQIAGLCHDLGHGPFSHLFDK
KFIPKARPDLKEDKKWTHEKASLDMLNHLITVNNLKPVMKGYRLELPVDLFFIEELIIGK
RTYPHDPKKQLEHGGRKPEKYFLYEIVSNKRNSIDVDKWDYFARDCHHLGIKNNFDHDRF
IKFARVCEVDKEKDAEEKLICTRDKGKFARVTDEDKKKEAEGRQICTRDKEVGNVYDFFQ
TRNCLHRRAYKHKVSNIVETMITEAFVLADQHLQFKGSDGKMFTMSTAIEDMVAYTKLTD
NVFEQILVSTLEELALARAILENILNRRLYKCVGQFYTKKKINDTEEAIGMQLAGDEDIN
LTPNDLIVNVTKMNYGMGKKNPIDHVRFYRKSAPNRAFKIPRGQVSTLIPGHFQEWLIQV
YCKRTDKESLGTARERFERWCNAQNEQEEQEANEGPN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacctgaagataccgacattgaatgtatggaggcagcatacaaagtctttaat
gaccccatccacggacacattgcactccaccctcttctggtcaaaatcatagacacacct
caattccaaagactgaggaacatcaagcagctcggaggggcatactacgttttccccgga
gcatctcataatcgctttgagcattccattggagttgggtacctggctggaaagcttgca
aaatctctgcaaaataaacagcctggactgaatatcactaagagagacatcctctgtgtg
caaatcgctggcctctgccatgatctgggacacggacctttctctcatctgtttgataag
aagttcattcctaaagcacgtccagatttgaaagaggacaaaaaatggacgcacgagaag
gcatcgctagacatgttaaaccatctgattactgttaacaacctgaagccggtgatgaag
ggctacaggctggagctgccagtggacctcttcttcatcgaggagctgatcattgggaaa
aggacctaccctcatgatccaaaaaaacagttggaacacggaggccgtaaaccagagaag
tattttctgtatgagattgtgtccaacaaaaggaacagcatcgatgtggacaaatgggat
tactttgcgagagactgccatcacctgggcatcaagaataactttgaccacgaccgcttc
atcaagttcgccagggtgtgtgaggtggacaaagaaaaagacgcagaggagaagctaatc
tgtaccagagacaagggcaagttcgccagggtgactgatgaggacaaaaaaaaagaagca
gaggggaggcaaatctgtaccagagacaaggaagtgggcaatgtgtatgacttctttcaa
acaagaaactgtctccacagaagagcctacaagcacaaagtatcaaacattgttgagacc
atgatcacagaggccttcgtattggcggaccaacacctccaattcaaggggtcagatggg
aaaatgttcacaatgtccacagctatagaggacatggtggcatacaccaagttgactgac
aatgtcttcgaacagatcctcgtttctaccttagaggagctggctttggccagggcgatc
ctagagaacatccttaaccgtcgcctctacaagtgtgtgggccagttctatacaaagaag
aaaatcaacgatacagaggaggcaattggtatgcagttggcaggtgacgaggacattaac
ctgaccccaaacgacctcattgtcaatgttaccaagatgaactatggcatggggaagaag
aatcccatcgatcacgtacgtttttaccgcaagagtgcacccaacagggccttcaagatc
cccaggggccaggtgtccacgctcatcccaggacactttcaggagtggttgatccaggtc
tactgtaagaggactgataaggagagcctggggacggccagggagcgctttgaacggtgg
tgcaacgctcagaatgaacaagaagagcaggaagccaatgaaggcccaaactaa
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