KEGG   Gadus morhua (Atlantic cod): 115549831
Entry
115549831         CDS       T10832                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
Enzymes [BR:gmh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     115549831
Protein phosphatases and associated proteins [BR:gmh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115549831
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115549831
SSDB
Other DBs
NCBI-GeneID: 115549831
NCBI-ProteinID: XP_030220890
Ensembl: ENSGMOG00000019547
LinkDB
Position
1:10245848..10261552
AA seq 1555 aa
MSRPRTDEFKPPPECPVFEPSWEEFGDPFAFINKIRPIAEKTGICKVRPPPGWQPPFACD
VDRLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCPLKIPHVERKILDLYRLNKLV
ADEGGFDLVCRDRRWTKIALQMGFAPGKAIGSHLRAHYEKVLYPYNLFQSGANLLASEPA
AKVTRLDADPEYEKYMLKPTLAADSQASKDLMAHDAPPRDPQQPERGCPNAYGAKHLKSE
GVQMKTEPGEGCDNRPNLRRRMGSFVAKPEPEKEHAITVKQEPVEVKEPVIEADKIKSRY
KKNLPPVPLIPPSPGRVHPVQVDLVVCLVCGSGADEDRLLLCDGCDDSYHTFCLIPSLQD
VPKGDWRCPKCLAQECSKPQEAFGFEQAYRDYSLRAFGQMADAFKSDYFNMPVHMVPTEL
VEKEFWRLVGAIEEDVTVEYGADIASKEFGSGFPIPNGRFKVSPADEKYLKCGWNLNNMA
MMDPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGS
AAEQLEAVMKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVVTFPRA
YHSGFNQGFNFAEAVNFCTTDWMPLGRQCVDHYRLLNRYNVFSHDEMVCNMASKAGTLDV
VLASAVHRDMALMIREEKALRDAVKKLSSVVWRPQGVSRCQEAKYDHLQDDERQCVKCRT
TCYLSAVTCPCSPGVLACLHHIHDLCPCPVSNYTLNYRFTLDDLYPMMTAVKHRAELYDD
WASRVAETLDARLEKKKGLSVFRSLVSESDSNIFPDNDLLFRLQLVTKDAEKCSSVAQQL
LGGKRQTRFRCGGKSQSLLTVEELRSFVRQLYNLPCSLTQAPLLKKLLNDIEDFQQHSEK
VLSEAVSSVVEIQGLLDVSFDFDVELPELPCLRVKLEHARWLEGVQQATGRPSTLTLEAM
RRLIDQGLGLAPHPSVEKAMARLQELLSVAEHWEDKAGSLLRASPPHPIETLSAAAEKAS
AIPAQLPNCLLLKASIRTAREWLQEAEEQQAGGTVPTADALADMVLRGQAIQVHLEPLER
FRSLSAEVQEWKESAASMLLKKDSPFTLLEILCPRFEVGSVGSPKRKPKKASQQPGKKKT
VPLDSLADIEKALSESKDSSSAAATLEELRLREMDALAALRAHNESKLLPSGDCMELTVC
LCHKTPMGAMLQCELCRDAFHSVCVRDPGGSPAERPWLCPPCRRSEAPPMAEVLSLLAAL
ERTRVRLPEADALHFLVERAVSWQHRARQTSDELRLQEMQEGPGTPPVLTRWASGSTTAD
SNAQAPYLTPEWNKTSLPQTVFYTEQKCIPLQGLSRELEELMVEGLLLPVSLPETQDLYH
VLLQRPLSPPPAGCLSPPLDDSSDCTEHLQLSSQEKTLSWAEDEDGSALSASEKTGKRHL
AREGVKAEGRPGKDKKPHYKRQKMNKDKSLERRAASTSSSPRSDFSQSDDSDEEMSECPA
ESCQQPEGDEVDWVQCDGRCNQWFHQVCVGVTTELAEKEDYVCVGCTIDDGHLRQ
NT seq 4668 nt   +upstreamnt  +downstreamnt
atgtcccgacctcggacggacgagttcaagccgcctccggagtgcccggtcttcgagccc
agctgggaagaattcggcgatccgttcgctttcatcaacaaaatccgtccaatcgctgaa
aaaactggcatctgtaaagtccgcccgcctccgggatggcaaccgccgtttgcctgtgac
gttgacagacttcacttcgttcctcggatccagaggctaaacgagctagaggcacagacc
agagtgaagctcaacttcttggaccaaatcgccaaattctgggacctacagggatgtcct
ttgaagattcctcacgtggagaggaagattttagatctataccgactaaataagctggtg
gcagacgagggcgggttcgacctggtctgccgggaccggcgctggaccaagatcgctctc
cagatgggcttcgccccgggcaaggccatcggctcacacctacgagcgcactacgagaag
gtcctttacccctacaatctgttccagagcggggcaaacctcctggcctcagagccagct
gccaaagtgacacgtttggatgctgatcccgaatatgaaaagtacatgctgaagcccacc
ctggcggcggacagccaggcctccaaggatctcatggcccacgacgcgcccccgagagac
ccccagcagcctgagaggggctgccccaacgcctacggagccaagcacttgaaatcggag
ggtgttcagatgaagaccgaaccaggcgagggttgtgacaacaggcctaacctacggcgg
aggatgggttcctttgttgccaaaccggaacctgagaaagagcatgctattactgtgaaa
caagagccagtggaagtaaaagagccagtgattgaagcagataaaataaagtcccgctac
aagaaaaacctacctccggttcctctgattccccccagcccgggacgcgtccaccccgtg
caggtggacctggtggtgtgtctggtgtgcggcagcggggcggacgaagaccgcctgctg
ctctgtgacggctgcgacgacagctaccataccttttgcctcatcccctccctccaggat
gtacccaagggagactggaggtgccccaaatgtctggctcaggaatgcagcaaacctcag
gaggcctttggcttcgagcaggcgtacagggactactcgctgcgtgcgttcgggcaaatg
gcagacgccttcaagtcagactacttcaacatgcccgtgcacatggtgccgacagagctg
gtggagaaggagttctggcgcctggtgggcgcaatcgaggaggacgtgaccgtggagtac
ggcgccgacatcgcctccaaggagtttgggagcgggttccccatccccaacgggcgcttc
aaggtgtccccagcagacgagaaatacctcaagtgtggctggaacctcaacaacatggcg
atgatggacccgtcggtgctgacgcacgtcaccgccgacatctgcggcatgacgctgccc
tggctctacgtgggcatgtgcttctcctccttctgctggcacatcgaggaccactggagc
tactccatcaactacctgcactggggagaacccaagacgtggtatggtgcgccgggctcc
gctgctgagcagctggaagcggtgatgaagaagcttgccccggagctgttcgactcccag
cccgacctcctgcaccagctggtcaccatcatgaaccccaacaccctcatggcccacggg
gtcccgatctacaggacaaaccagtgtgccggggagtttgtggtcacttttcccagggcc
taccacagtggcttcaaccagggcttcaactttgccgaggcggtcaacttctgcaccacg
gactggatgcctctgggccgacagtgtgtggaccactaccgcctgctgaaccgctacaac
gtcttctcccacgacgagatggtctgcaacatggcctccaaggcgggcacgctggacgtg
gtgctggcgtcggcagtgcaccgcgacatggccctcatgatccgcgaggagaaggcgctg
agggacgcggtcaagaaactgtcctctgtcgtctggcgtcctcagggagtgtcgcggtgc
caggaggccaagtacgaccacctgcaggacgacgagcgccagtgcgtcaagtgccggacc
acctgctacctgtctgcggtcacctgcccctgcagcccgggggtcctcgcctgcctgcac
cacatccacgacctctgcccgtgtcccgtctccaactacacactgaattacaggttcaca
ctggacgacctttaccccatgatgacggcggtcaaacaccgagcagagctgtatgatgat
tgggcctctcgcgtggccgagacactcgacgccaggctggagaagaagaagggtctgagc
gtctttcgctccctcgtctctgagtcggactcaaacatcttccccgacaacgacctcctc
ttcaggctgcagctggtcaccaaggacgcagagaaatgctcctcggtggcacagcagctt
ctgggcggcaagcggcagaccaggtttcggtgtgggggtaaatcccagagtctgctgacg
gtggaggagctgaggtcgtttgtgagacagctatacaaccttccctgtagcctcacccaa
gcaccgctgctaaagaaactcctgaacgacatcgaggacttccagcagcacagcgagaag
gtcctctccgaggccgtgtccagcgtggtggagatccagggcctgctggacgtcagcttc
gacttcgacgtggagctgccggagctgccctgtctgcgggtgaagctggagcatgcgcgc
tggctggagggggtgcaacaggccaccggccggccctccaccctcaccctggaggccatg
aggaggctcatcgaccaggggctgggcctggccccccacccatcggtggagaaggccatg
gcccgcctgcaggagctgctcagcgtggctgaacactgggaggacaaggcgggcagcctc
ctcagagccagtcccccccaccccatagagaccctcagcgctgcggctgagaaggcgtct
gccatcccggctcagctgcccaactgtctcctgctcaaggcctcgatcaggaccgccaga
gagtggctgcaggaggcggaggagcagcaggctggaggcaccgtgcccacggcagacgcg
ctggccgacatggtgctccggggccaggccatccaggtccatctggagcccctggagaga
ttcaggtccttgtcggcagaagtgcaggaatggaaggagtcggcggcctccatgcttctg
aagaaagactcccccttcactctactggagattctatgtccgagatttgaggtcggaagc
gtaggttctccgaagaggaagcccaagaaggcttcccagcagcctggcaagaagaaaacg
gtaccacttgactctctggctgacatcgagaaagctctctcagagtccaaggattcatcc
tctgctgccgccaccctggaggagctgcgcctccgggagatggacgccctcgccgctctc
cgggcgcacaacgagtccaagctgctgccctcgggcgactgcatggagctcacggtgtgc
ctgtgtcacaagacgcccatgggcgccatgctgcagtgcgagctctgccgcgacgccttc
cacagcgtgtgcgtgcgggacccgggcgggagccccgcggagcggccgtggctctgtccg
ccctgccgccgctcggaggcgccgcccatggccgaggtcctctccctgctggcggcgctg
gagcgcacgcgggtgcgcctgcccgaggccgacgccctccacttcctggtggagcgggcg
gtgagctggcagcaccgcgcgcggcagacctcggacgagctccgcctccaagagatgcag
gagggccccgggactccgcccgtcctgacccgctgggcctcggggagcaccacggccgac
agcaacgcccaggctccgtacctcacgcccgagtggaacaagaccagcctcccgcagacg
gtcttctacacggagcagaagtgcatccccctgcagggtctgagtagggagctggaggag
ctgatggtggagggccttctgctgccggtgtcgctgcccgagacccaggacctctaccac
gtcctgctgcaacggcccctgagcccgcccccagccgggtgcctgtctccaccactggac
gactccagcgactgcaccgaacacctccagctcagcagccaggagaagactctgtcgtgg
gccgaggacgaggacggcagcgcgctcagcgcctccgagaagacgggcaagcggcatctg
gcgagggagggcgtgaaggcagagggccggccggggaaggacaagaagccccactacaag
aggcagaagatgaacaaggacaagagcctggagcgccgggcggcctccacctcctcgtcc
ccgcgctcagacttctcccagtcggacgactcggacgaggagatgtccgagtgtcctgcg
gagagctgccagcagccagagggagacgaggtggactgggtccagtgtgacgggcgctgt
aaccagtggttccaccaggtgtgcgtcggcgtgacgaccgagctggcggagaaggaggac
tacgtttgcgtgggctgtacgatagacgatggacacctgaggcaatga

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