Gadus morhua (Atlantic cod): 115550416
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Entry
115550416 CDS
T10832
Symbol
man2c1
Name
(RefSeq) alpha-mannosidase 2C1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
115550416 (man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115550416 (man2c1)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
115550416 (man2c1)
Membrane trafficking [BR:
gmh04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
115550416 (man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
115550416
NCBI-ProteinID:
XP_030221274
Ensembl:
ENSGMOG00000008323
LinkDB
All DBs
Position
9:21895885..21907626
Genome browser
AA seq
1026 aa
AA seq
DB search
MYHQPVFKNRRTLLERAEKFISEIYFTDCNLRGRLYGDSYPLEFLTSFLSSKRIPFSEAV
SQNFAPYKIGDTFGPTWCTCWFKVILRIPESWRGKEVHLLWESDGEAMVWRDEQPVQGLT
KEGEKTSYILSECLGDDDPHSITLYVEMACNGLFGAGQGSMIAAPDPNRKYSVHKAELVV
LHRDVRETLTDFEMMVDIVKHLGEGEQRGYQALFTVNQMVNLCDPAQPDSFPKARALAES
FFTQRNGGSQHTVHAMGHCHIDTAWLWPYEETIRKCGRSWVTAVRLMEKNPDFRFTCSQA
QQFQWVKSWYPGLYAQIQHFVKKGQFIPVGGTWVEMDGNLPSGESMVRQFLEGQRFFHQE
FGIYCKEFWLPDTFGYSAQLPQIMQGCGISRFLTQKLSWNLVNTFPHNTFFWEGLDGSQV
LTHFPPGNSYEMKGRVDELVNTVKNNKDKGRANHSAALFGFGDGGGGPTQLMLDRLTRVQ
DTDGLPKVRMSTPDQLFSELLADSALLCTWSGELFLELHNGTYTTQAKIKRGNRQCESLL
HDIEVASSLALGQDKAFHYPLEQLQELWRLLLLNQFHDVIPGSCIEMVVEDALRYYQDIL
RVGSGLLGDACRHLGQRDQKGDAPAVFNSLPWERNEVVQLQEATGPPSLALVKVPSVGRA
LVTDTQPAIPVSVTVQADGTVLMENGILKTIINKDGSLASLCLMESNREALSDGCHGNQF
VMFDDVPLYWDAWDVMDYHLQTRRPVTEVVEPVQVVSPGGLRGSVRFTLRISPKSTVTQE
VVLDAMSPYVRFNTQVEWGESHKFLKVEFPVLVRSSNATYEIQFGHLQRPTHRNTSWDWA
RFEVWGHKWADLSEHNFGVSLLNDCKYGYSIHKNLMALSLLRAPKAPDANADMGAHLFTY
AIMPHAGSFQTAGVIQSAYNLNYPLRLFKTSTDTAPWSAFSVDAAAVVLETIKQAEDSRG
TLLVRLYESHGSSVTTMLRTDLPLQQAWHCDLLERPDHTQPAQMTSEGITLGFGPHQIRS
LLLVLK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatcaacctgtctttaaaaacagaagaactctgctagagagagcagagaagttc
atatcagagatctattttacagactgcaatctccggggacgactctatggggactcgtat
ccacttgaatttctgacttcattcctgtcctctaaacggattcccttctcagaagctgtc
agtcagaactttgctccttacaagattggcgatacctttggaccaacatggtgcacttgc
tggttcaaagtgatattgagaatacccgaatcctggagggggaaggaagtccatcttctg
tgggagagtgatggagaagcgatggtttggagggatgagcaaccagtccagggattaact
aaagagggtgaaaagaccagttacatcctatctgagtgtctgggagatgatgacccacac
agcatcaccctctacgtggagatggcctgtaatggtcttttcggagctggacaggggtcc
atgattgcagctccggatcccaacaggaagtactccgttcataaggcggagctggtggtg
ctccaccgggacgtcagggaaacgctcactgactttgagatgatggttgatatcgtgaag
cacctgggggaaggagagcagcggggctaccaagccctgttcaccgtcaaccagatggtg
aacctctgtgatcccgcccagccggactccttccccaaagcccgcgctctagcagagagc
ttcttcacccagcgcaacggaggcagccagcacaccgtccatgccatgggtcactgccac
atcgacacagcgtggctctggccctacgaggagaccatccgcaaatgcggccggagctgg
gtgacggccgtacgtctcatggagaagaatcctgattttaggttcacgtgctctcaggcc
cagcagttccagtgggtgaagagctggtaccccggactctacgcgcaaatccagcacttt
gtcaagaaaggccagttcattccggttggaggcacatgggtggaaatggatggcaatctt
ccgtccggtgagtccatggtccgtcagttcctggaaggccagcgcttctttcaccaggag
tttgggatctactgcaaagagttctggcttccagatacttttggatactcagcacaactc
cctcagatcatgcaggggtgcggcatctcccggttcctcacccagaagctgagctggaac
ctggttaacacattccctcacaacacttttttctgggagggtctggacggctcccaagtc
ctcacccacttcccgccagggaactcctacgagatgaagggcagggtcgatgaattggtt
aacactgtgaagaataacaaagacaaaggcagagccaatcacagtgcagctctgtttggc
ttcggcgacggaggcggtggacccacgcagctcatgctagacagactgacgcgggttcag
gatacagatggtcttccaaaggtccgaatgtcaactcctgaccagttgttctctgagctc
ctggccgactccgccctgctgtgcacgtggtccggggagttgttcctggagcttcacaac
ggcacctacaccacccaggccaagataaagcgagggaaccggcagtgcgagtctttgctc
catgacatcgaggtggccagcagcttggctctgggccaggacaaggccttccactaccct
ctggaacagctgcaggagctctggaggctgctccttctcaaccagttccacgacgtcatt
cccgggagctgcattgagatggtggtggaagatgcgctccgatattatcaagatatcctc
cgtgttggaagcggtcttctgggcgatgcctgtagacacctcggccagagggaccagaag
ggggacgcccccgctgtgttcaactccctgccctgggagcgtaatgaggtggtccagctc
caggaggccactggtccaccatcgctagctttagtgaaggttcccagcgttggcagggcc
ctggtcacggacacacaaccagctattccagtttctgtcacggttcaggccgatggaacg
gtcctcatggagaatgggattttgaaaacgatcataaacaaggacggcagtttggcatca
ctttgtttgatggagagcaacagagaggccctctctgacggctgccatggcaaccagttt
gtgatgtttgacgacgtgccgctgtactgggacgcctgggacgtgatggactaccacctc
cagaccaggaggccagtgacggaggtggtggagcccgttcaggtggtgtcccccgggggc
ctccggggcagcgtgaggttcaccctccggatcagccccaagagcaccgtcacccaggag
gtggtgctggacgccatgagtccctacgtcaggttcaacacgcaggtggagtggggggag
tcacacaagttcctgaaggtggagttcccggtgctcgtgcgcagctccaacgctacatac
gagatccagtttggccacctccagagacccacccacaggaacacgtcctgggactgggcc
cgcttcgaggtatggggtcacaaatgggctgatctgtctgaacacaactttggagtttct
ctgctgaacgactgcaaatatggttattccatacataagaacctcatggctctgtctcta
cttcgagcacccaaggcccctgatgccaacgctgatatgggcgctcatctctttacatac
gccatcatgccacatgcaggatccttccagacggccggcgtcatccagagtgcctacaac
ctcaactaccctctgaggctcttcaagaccagcactgacacggccccgtggagcgccttc
tccgtggacgccgccgccgttgtcctggagaccatcaagcaggctgaggactcaagaggc
actctactggttcgcttgtatgagtcccacggcagcagtgtgaccacaatgctccgtaca
gaccttcccctccaacaggcctggcattgtgatcttctggagcgtccggatcacactcag
ccagcccagatgacctcagaaggaatcactctggggttcggtcctcatcaaataagatca
ctcctccttgttctaaaataa
DBGET
integrated database retrieval system
