Gadus morhua (Atlantic cod): 115550432
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Entry
115550432 CDS
T10832
Symbol
phf21a
Name
(RefSeq) PHD finger protein 21A isoform X1
KO
K24651
PHD finger protein 21A
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115550432 (phf21a)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
115550432 (phf21a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
PHD-1st_NSD
PHDvar_NSD
Seryl_tRNA_N
zf-HC5HC2H
AT_hook
DUF6026
zf-RING_2
PHD_NSD
CALCOCO1
STAT_alpha
Motif
Other DBs
NCBI-GeneID:
115550432
NCBI-ProteinID:
XP_030221303
Ensembl:
ENSGMOG00000009524
LinkDB
All DBs
Position
9:complement(12524421..12546884)
Genome browser
AA seq
1139 aa
AA seq
DB search
MRLKKSSCFVPQFLLFFGPVLFKLVRNPSGSALLSPPETRGASVGAEATLRTRRSGYWVV
FNNYLINCERRRRGPPLLCQQCCSGTQLKANCASLMLQLDGLPTGAGGKAELCPDPAVRL
SGPMMELQILQEALKVEIQVHQKLVAQMKQDTENADLKKQLHELQAKITALSEKQKKVVE
QLRKEILVKQDPESKLPVHGPPGGGDHKLGSQPMGGDNKQAGLLVSPPVQPGLPTGQLQQ
TLTVTPVLTKTIPLVLKAAATPTLPAAVLPQRTPAVAMVTTAISKSDSMNAPINLQVTGK
PTNQISEPVRLVVQATANSSAQPIKVPQFVPPPRLTPRPSLQPQVRPKSVPVTNVAIAPA
PPPMMAAPALHQRPVMVAAKIGPSSVTPIHQLRILNGQTPPTTLTGIVITTSARLNTAPH
GATQPIGSPAPPPPSSTQPISSLDAAKMVKLVGGRELKTVVSTPSVTPPPRQKREDNPQK
LAFMVSLGLVTYDHLEEIQSRRQERKRRTTANPVYSGAVFEPERKRSAVSYLNSPLHQGT
RKRGRPPKHTNVPELCSLTPTPPSITAPDQPSPAPPAHTLPLPSPASGDGDVHEDFCTVC
RRSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQDQILKKEEAIPWPGTLAIVHS
YIAYKEAKEEEKQKLMKWSSELKMEREQLEQRVKQLNNSITKYMENKNNMLARQKEMSQA
LEKVKHLVRLIQAFNYNKALLETEPIVPTVQVPAVLVPTAQVPTALVPTVQVPTALVPTV
QVPTALVPSVQVPTALVPSMQVPTALVPSVQVPTALVPSVQVPTALVPSVQVCSALPTVQ
VSSTLLHTAQLPSAQLPSAQLPSAQLPNAQLPTAQPPTAQPPTAQPPTAQPPTAQVPTAQ
VLTVQVPTAQFPNSQVPVAQVPVAQVPVVQVPVAQVPVAQVVPLAQVAPVKQAIPTAQVP
TALVFVAEVTTRLVPVAEVPATQVPATEVQPPVETEASVPPAEPPAVAVESGEAAVAAPR
PSAVARPAEQEEVRDPIPQIHVETSGARPEEDDPQGPGGPAVETKAGPGGSEAAATTNGT
AESAAHGAGAAPRAEGTSGACGASEAAPEVEATDGNNSKTSASRRPPLLDPLCTLDTKK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaagaagagttcttgttttgtacctcagtttctcctcttttttggacccgtt
ctatttaaactagttcgaaacccgtccggatctgctctcctctctcccccagagacccgg
ggagcctctgtcggcgctgaggccacgctgcggacgcggcggagtggttattgggttgtt
tttaataattatttaattaattgtgagaggaggagaagaggaccgccgctgctctgccag
cagtgctgcagtggcacccagttgaaagcaaactgcgcttctttgatgcttcaattggat
ggtcttccaacaggagcgggtggtaaggctgaactttgccctgacccagctgtgagactg
agtggacccatgatggagctccagatcttacaggaggctctgaaggtggagatccaggtc
catcagaaactggtggctcagatgaagcaggacacagagaatgctgatctgaagaaacag
ctccatgaactccaagccaaaatcacagcgctcagtgaaaaacagaaaaaggtggtggag
cagctgaggaaggagattctggtgaagcaggacccggagagcaagctgccagtccacggc
ccaccaggagggggcgaccacaagctgggaagccagccaatggggggtgacaacaaacag
gctggccttctagtgagtccccccgttcagcctggcctgcccactggacaactgcagcag
actctgaccgtcaccccggtcctcacgaagacgatacctctggtccttaaagctgcagcc
acacccaccctaccggccgcagtcctgccacaacgtacccctgccgttgctatggtaacc
acagccatcagcaaatcggactccatgaatgccccaataaacctccaggtcaccggcaaa
ccgaccaatcagatctctgagccggtgcgcctcgtggtgcaggctaccgccaactcctca
gcccagccaatcaaagttcctcagtttgtccctcctcctagactgacgcctcggccctct
ttacagccacaggtccgccccaagtccgtcccggtcaccaacgtggccatcgccccagcc
ccgccccccatgatggcggcgcccgcgctgcaccagaggcctgtgatggtggccgccaag
atcgggccctcctccgtcacccccatccaccagctgcgcatcctcaatggccagacccca
cccaccaccctgacgggcatcgtcatcaccaccagcgcccggctaaacaccgccccccac
ggcgccacacagccaatcgggagtccggcgccgccccctcccagctccacacaaccaatc
agcagcctggacgcggccaagatggtgaagttggtgggaggacgagagctcaagactgta
gtctccaccccctctgtaaccccgcctccccgacaaaagagggaggataatccacagaaa
ctggccttcatggtgtctctggggctggtgacctacgaccacctggaggagatacagagc
cggcggcaggagaggaaacgcagaaccacagccaacccggtgtacagcggcgctgtgttc
gaacccgagaggaaaagaagtgcagtgagctatctcaacagccctcttcatcaagggacc
aggaaaagaggtcgcccacccaaacacaccaacgtgccggagctgtgcagcctcaccccg
actcccccctccatcacggcccccgaccagccctcccccgcccccccagcccacaccctc
cccctgcctagccccgcctccggggatggagacgtccatgaggacttctgcactgtgtgc
aggcgcagtgggcagttgctcatgtgcgacacgtgttcgcgtgtttaccacctggactgc
ctggaccccccgctgaaaaccattcctaaaggcatgtggatctgtcccaaatgtcaagat
cagatcttaaagaaagaagaggccatcccatggcctggcaccctggccatcgttcactcc
tacatcgcctacaaagaagctaaagaggaagagaaacagaagctgatgaagtggagttct
gagctaaagatggagcgagaacaactggagcagcgagtcaaacagctcaacaactccata
acaaaatacatggaaaacaaaaacaacatgctggcccgtcagaaggagatgagccaggcc
ctggagaaggtcaaacatctggtccgtctcatccaggccttcaactacaacaaggctctt
ttggagacggagcccattgtccccacggtgcaggtccccgcagtgctggtccccaccgcg
caggtccccaccgcgctggtgcccaccgtgcaggtccccaccgcgctggtgcccaccgtg
caggtccccaccgcgctggtgccaagcgtgcaggtgcccaccgcgctggtgcccagcatg
caggtgcccaccgcgctggtgcccagcgtgcaggtgcccaccgcgctggtgcccagcgtg
caggtgcccaccgcgctggtgcccagcgtgcaggtgtgcagcgcgctgcccaccgtgcag
gtgtccagcacgcttctgcataccgcgcagttgcccagcgcgcagttgcccagcgcgcag
ttgcccagcgcgcagttgcccaacgcgcagctgcctaccgcgcagccccccaccgcgcag
ccgcctaccgcgcagccccctaccgcgcagccccctaccgcgcaggtccctaccgcgcag
gtcctcactgtgcaagtcccaacagcgcagttccccaactcgcaggtccccgtcgcgcag
gtccccgtcgcgcaggtccccgtcgtgcaggtccctgtcgcgcaggtccctgtcgcgcag
gttgtccccctcgcgcaggtcgcccccgtcaagcaggccatccccaccgcgcaggtcccc
accgcgctggtctttgtggcagaggtcactacaaggcttgtccccgtcgcggaggtcccc
gccacacaggtccccgccacggaggtccaacctcctgtagaaacggaggccagtgtcccc
cccgcagagcccccggcggtggcggtggagtcgggggaggctgcggtcgcagccccgcgg
ccctctgctgtggcccgaccagcggagcaggaggaggtccgggaccccatccctcagata
cacgtagagaccagcggggcgcgccctgaggaggacgacccccaggggcccggggggccc
gctgtagagaccaaggcggggccgggcggctcggaggcggctgccaccaccaacggtacg
gccgagtccgccgctcacggggccggcgcggcccccagggcggagggcacctcgggggcc
tgcggggcctcagaggcggcgccagaggtagaggcgaccgacggcaacaacagcaaaacc
tcagcgtcgcgccgcccccccctcctggacccactctgtactctggacactaagaagtaa
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