Gadus morhua (Atlantic cod): 115550444
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Entry
115550444 CDS
T10832
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115550444 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmh03009
]
115550444 (rbm28)
Ribosome biogenesis [BR:
gmh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115550444 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
115550444
NCBI-ProteinID:
XP_030221332
Ensembl:
ENSGMOG00000007091
LinkDB
All DBs
Position
9:988434..1005406
Genome browser
AA seq
972 aa
AA seq
DB search
MGSHTLFVKSLPDSASNERLTEIFSEIGPVKHCFVVNEKGTKQCRGFGYVMYAMEDDALQ
ALKEVKSYDGKRISVSIAKKKKHDKKRPVPKGPPPKEGEEKEGPPKETQKKPLKEGPPKE
TQKKPLKIEPPKETPKKAPKERPAKPLAEAPPKQGPPKEQPQKCGKEESPKEGTPKQQQP
KEEAPKAQPPKEEEPTFKGIRKSALKSKLIIRNISFKCSEDDLKQTFSAFGEVLETKIPL
KADGKMRGFGFVLFKNMSGAGKALKAMNMKEIKGRQVAVDWAIPKDKFLATQPEVPKKKE
DPVKDEPEKDEAESASEDEGGTEKQAAPKKGALSKKAAKQLKEASSDDEEDSDNGEESEE
EADEEDGGSQESGDEDDDNSSFDSDEEDYEDDDDEDDDDSDDDLDRKPRKPLPSDVNEGR
TIFIRNLSFDTEEEALEEALLRFGELNYIKIVLHPDTDHSKGCAFAQFKRKESAEKCIAM
TQDDAENGGVRVDGRRLIVSAAVSRESAAQLKDKKVKVETGARNLYLAREGLIRAGTKAA
EGVPEADMVKRTRFEEVKRTKLRDINVYVSKTRLCVHNLPKSVDNTKLKDICFQALSRAR
GVRIPECRVMYDRKPEKGKAMGLSLGYGFVEFQCPDHALSTLRHLNNNPDIFGPTKRPIV
EFSLEDGRKLKLKEARQLKNKEHFKNGPRKGGVKIQFKSQPGSGEKIQPKPGVAVKIQPK
PGVAVKIEPKPEVAVTIELQPGDAVKVQPQPGDAVKVQPKTGCVVKFKTEPGAAASLQPA
GQNNTVQAKRKMDTPEAKHFSGFLTKPEVEYVELEDGKKKRKTLPFPSHRGPKIRLRDKG
KQQAPPKKPKGHTSRKDRQAPSMVQKPPQSRPQDDELDDTAQVWNTHTIRPSNNLNLPSG
RPNVMFALPELYGTRDFLSQNECIFRQTEAFDPDLYELSNILVADSNLPLATDPYQAVDL
YMHLREAIRASV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgggtagccatacgttgttcgtcaaatctttgcccgattcggcgtcaaatgaacgtctt
acagagatcttttccgagatcggacctgtaaagcattgcttcgttgtcaacgaaaagggg
actaaacaatgtcggggatttggatacgtcatgtacgccatggaggacgatgcactacaa
gcattgaaagaagtcaaaagttacgacgggaaaaggatatctgtgtcaattgcaaagaag
aagaaacacgataaaaagaggccagttcccaaaggaccacctccgaaagagggggaagag
aaagagggacccccaaaagagacgcagaagaaacccctgaaagagggacccccaaaagag
acgcagaagaaacccctgaaaatagaacccccaaaagagaccccaaagaaagccccgaaa
gagcgaccagcgaaacccctggcagaggcacccccaaaacagggacccccaaaagagcaa
ccacagaaatgcgggaaagaggaatccccgaaagagggaaccccgaaacagcaacaaccg
aaagaggaagcccccaaagctcaacctccaaaggaagaggagcccacatttaaaggcatt
cgaaaaagtgcactgaaatccaaactcatcatcagaaatatcagttttaagtgctccgaa
gatgatctgaagcagactttttccgcatttggggaagttctcgaaaccaaaatccctctg
aaagctgatggaaagatgcgtggttttggatttgtcctgttcaaaaatatgtcgggagca
gggaaagccctcaaagctatgaacatgaaggagataaaagggcgtcaggtagcggtggac
tgggccataccgaaggataagttcctcgccacccaaccagaagttcctaagaaaaaggaa
gatccggtgaaagacgaaccggagaaagacgaagcggagagcgcctctgaggacgagggc
ggcacggagaagcaagcggcgcccaagaaaggagccctctccaaaaaggctgcaaagcag
ctgaaggaggcctcttcagacgatgaagaggatagtgacaatggagaagagagtgaggag
gaggcagatgaggaggatggcgggtctcaagagagtggagatgaggatgatgacaacagt
agcttcgatagtgacgaggaggattatgaggatgacgatgatgaagatgatgatgacagc
gatgatgatctagatcgtaagccgaggaaacccctcccttcagatgtgaacgagggcaga
acgatcttcatcaggaacctctccttcgacactgaggaggaagctctggaggaggcgctc
ttgcgtttcggggaactgaactacatcaagatagttcttcacccagacacggaccattcc
aaaggttgtgcatttgcccagtttaaacgtaaagaatctgcggaaaagtgcattgcaatg
acccaagatgatgcagagaatggcggcgtccgcgtcgacggccggaggctgatcgtctca
gcggcggtgagccgggagagtgcagcccaactcaaagacaagaaggtgaaggtggagacc
ggggccaggaacctctacctagcgagagaaggattaattcgtgctggaaccaaggctgca
gagggagtgcctgaagcagacatggtcaaacgaacccggtttgaggaggttaagagaacc
aagctccgagacattaatgtgtacgtgtcgaagactcgactctgtgtccataacctaccc
aagtcggtggacaatacaaaactgaaggacatctgttttcaagctttaagcagagcaaga
ggagttcgcatccccgagtgcagggtgatgtatgacaggaaaccagagaagggcaaggcc
atgggcctgtctctaggatacggctttgtcgagttccagtgcccagaccacgctctcagc
accctccgccacctcaacaacaacccggacatcttcggccccaccaagagacctatcgtc
gaattttccctggaggacggaaggaaactgaaattaaaggaagcaagacaacttaaaaac
aaggaacacttcaaaaacggacctcgtaaaggtggagtgaagattcagttcaaatcacaa
ccaggaagtggagagaagattcagcccaaaccgggagttgcagtgaagattcagcccaaa
ccgggagttgcagtgaagattgagcccaaaccggaagttgcagtgacgattgagctacaa
cctggtgatgcagtgaaggttcaaccccaacctggtgatgcagtgaaggttcaaccaaag
actggatgtgtggtgaagtttaagacggaacctggagctgcagctagcctgcagccggcc
ggccagaacaacacagtgcaagccaaacggaaaatggatactcctgaagccaagcacttc
tctggattcctgaccaagccggaggtggaatacgtagaactggaggacggaaagaagaag
cggaagactctgcccttcccgtcacacagggggcctaagatcaggctgcgtgataaaggt
aaacagcaggctcctcccaagaaacctaaaggtcacaccagcaggaaggaccgccaggct
ccttcgatggtacagaaacccccacagtccaggccacaggatgatgagttggatgacact
gcacaggtctggaacacacacaccatcaggccatcgaacaaccttaacctccccagcggt
cggcccaacgtgatgtttgcattacctgaactctatgggacaagagacttcctttcccaa
aatgaatgtatctttcgccagaccgaagcgtttgatccagatctatatgaactaagcaac
atccttgtggctgattccaatctccctctagcaacagatccatatcaggcagtggatttg
tacatgcacctcagagaggccatcagggcatctgtgtag
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