Gadus morhua (Atlantic cod): 115550753
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Entry
115550753 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04744
Phototransduction
Brite
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115550753
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GFIT
Other DBs
NCBI-GeneID:
115550753
NCBI-ProteinID:
XP_030221898
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Position
9:complement(4566967..4599068)
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AA seq
1618 aa
AA seq
DB search
MFNWVVRVVPKPPDAQETQAEEAPKTPAPQPKVREVKSPPIKPQLTEDQLSEDSQGQSGV
LGWLSNGFSSALPKPSGTPGLRRANSDARPGDDGERAGVMSWVTQGLTNILPQPDEKYRE
APLNPNDEQTEVHPLQEMPDYDPLPDIPVVDVVSDDEMSESENRTPQFAPKVVQWIKQAI
PQPVVLPPGAVAIEPRSPRSACSNRSSLDKVLSPPPESLSGISLDTDGKPGGMMGWFMSG
FALRLPQPSIRNKEDVAAATEALQKAPPKPRPEMVLEDVDSDHEEPVRGGNPPSPAGTPE
TRPAGGQDAQTGPAEPDHSDADGTGTGQEDAETQTGRWTPFINSIKREAEDVALATMEER
LLQERVLMTRMAEDVARQTAEMAVRQMASEGGSIKLSLGSQDLLGEPEPELQALEGEEEE
VEQSLHKTPEPQECDGEEDQNQPEIPEELEDPEEAEPVGSKPVGPEPVETEEAAAEESAP
ESEEESESEEEDSQQDSSGTQGTSGPEPVTEQPQTGEEGADTTAAKDEEAAGEGSCAPVS
CEVLKTYLMSVPYVSDCLGNLGAFLKENGVSPTKVGSAPAQLLSDVTKRLPSLPPELRQE
LSRIRLTQVPRNIIETLTELVPARSEGSGGLARYLGLTAASVPSVSGLSQSLAAVPQKVA
AIPARAQQYYNNVQSRLNSLMPQDAXEQNQQQQQQQKKNPLISDQDQDLELNRLVRPTPL
PPPLRSRSPSPSPVSPGGSALDLPNVPSYPRLPPIASPPCQQTGTLPRQLSGVSNPAFCI
DDEREAPARHPGSSRLSLRPEVNVEDVDSDQERGAGWGGGGRGPRSPPQIVLTPQDSKLK
TLAVPVTPKGGRQSKAADKDGRDRRTFWTKSKKSQSHSEEDDDEGPVRAWSSQTSLHHTE
DRDRPASSCSQTSAVVNERLQELVKMFKERTEKAKEKLIDPVSSDDDSDITRKAPTPPHF
VLHSSPPAPPPPAVPQVAKEEAPPGSASAGGGGGGGGGGGGGGGGEEGPEEGEVKTGRCC
KVLKVPRWIGACVRLRFPSSIDPFTNLMYVLWLFLVTLAWNWNVWLIPVRWAFPYQTPTN
IYYWLLTDYCCDLVYLLDITLFQPRLQFVRGGDIVCDRKDMRKNYMKTNRFKLDVVSLVP
LEFFYFITGINPLLRLPRLLKYNSFLEFNNRLEAILTKAYIYRVIRTTTYLLYCLHCNAC
LFYWGSAYEGLGSTKWVYDGVGNGYIRCYYFAVKTLITIGGLPDPTNLFEIVFQLINYFV
GVFAFSIMIGQMRDVVGAATSGQTHYRACMDNTIKYMATYRIPKDVQNRVKTWYNYTWAS
QGMLDEQELLSQLPDKMRLDIAVDVSYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGD
YVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGGNRRTANVI
AHGFANLFILDKKDLNEILVHYPESQKLLRKKARKMLNNGKKPEPKPETKATFPAPPPRA
ETPRLLRAALEMAEKASGLKGALAKVKAGSKSSVSLQRSDSSTAATPSPAPPRVPTGTRP
RPPPPAPQRCVHRPGGSPAALWRRAPRPVLMPTEPSRPWLRDMDKSWGRGRRGRGKRE
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactgggtggtaagagtggtgcccaagccccctgatgcccaagagacccaggca
gaagaagccccaaagacccccgccccacaacccaaagttagggaagttaagagcccacca
atcaagcctcaactaacagaagaccagctttctgaggacagtcagggtcagagcggggtc
ctgggctggctgtccaacggcttctccagtgctctccccaaacccagcggaacccccgga
ctcaggagggccaactccgacgcccggcctggggatgacggagaaagggctggggtaatg
agctgggtcacccagggcctcactaacatcctcccccagcctgatgagaaatacagagag
gcccccctgaaccccaacgatgagcagacagaggtccatccgttacaggaaatgccagat
tacgaccccttgccagacatccctgtggttgacgtggtgtcagacgacgagatgtctgag
tcggagaatcggaccccccagttcgccccaaaagtggtgcagtggatcaaacaggccatc
ccccagccggtcgtcctaccccctggcgctgtggccatagaacccaggtcacccaggtcc
gcctgctccaaccgttcttctctggacaaagttctgtctccaccacctgaatccctgagt
ggcatctccctggacaccgacggcaagccaggggggatgatgggttggttcatgtcaggg
tttgctctccggttgcctcaaccctccattaggaacaaggaagacgtcgctgctgcgacg
gaggcgctacagaaagcgccacccaaacccagaccagagatggttctggaggacgtcgac
tcggaccacgaggaaccggtccgaggggggaacccgccgtccccggccgggacgccagag
acccgaccagcggggggacaggacgcccagaccggaccagcggaacccgatcacagtgac
gcggacgggacggggaccggccaggaggacgccgagacccagacgggccgctggaccccc
ttcatcaacagcatcaagagggaggccgaggacgttgccttggcaaccatggaggagcgg
ttgctgcaggagcgcgtgctgatgacccggatggcggaggacgtggcgcgtcagacggct
gagatggccgtccgacagatggcctccgagggggggtccatcaaactgtccctggggagc
caggacctgctgggggagcctgagcccgagttgcaggcgctcgaaggggaggaggaagag
gtggaacagagtctgcataaaaccccagaaccgcaggagtgtgacggcgaggaggaccaa
aaccagcctgaaatcccagaggagcttgaagacccagaggaagcagagcctgtggggtcg
aagcctgtgggacccgaacctgtggaaacagaggaggctgctgctgaagaatcagcgccg
gagtcagaagaagagtcagagtcagaggaggaggactcgcagcaggactcctctggaaca
cagggtacctctggaccagaacctgttacagaacaaccacagacaggagaggaaggcgct
gacaccactgcagccaaagatgaggaagctgctggagagggcagctgtgcgcccgtcagc
tgtgaggtcctgaagacctatctgatgagcgtcccgtacgtgtccgactgcctgggcaac
ctcggcgccttcctcaaagagaacggtgtctcccccaccaaggtgggctccgcgcccgcc
cagctgctgtccgacgtcaccaagcgcctgccctccctgccccccgagctgcgccaggag
ctctccaggatccgactcacccaggtgccccgcaacatcatcgagaccctcacggagctc
gtccccgcccgctccgagggctccggcggcctggcgcgctacctcggcctgacggcggcg
tcggtgccgtccgtgtcgggactgtcccagagcctcgccgccgtcccccagaaggtggcg
gccatccccgcgcgggcgcagcagtactacaacaacgtccagagtcgcctcaacagcctc
atgccacaagatgcctaagaacagaaccagcagcagcagcagcagcagaagaagaacccc
ctcattagcgaccaggaccaggacctagagctcaaccggctagtgagaccgacccccctg
cccccgcccctgcgctcccgctccccctccccgtcccccgtctcccccggcgggagcgcc
ctggacctgcccaacgtgccttcctacccccgcctgccccccatagcgagccccccgtgc
cagcagaccggaaccctcccccgccagctgtccggcgtctcgaacccggccttctgcatc
gacgacgagcgcgaagccccggccagacacccggggagctccagactaagcctccgtcca
gaggtcaacgtcgaggatgtggactcggaccaggagagaggagcagggtgggggggagga
gggcgtggcccccggagccctccccagatagtcctgaccccccaggactccaagctgaag
accctcgcggtccccgtcacccctaaaggaggccgccagagcaaggcagcagataaagat
ggaagagatcgcagaactttctggacaaaaagtaagaagagccagtctcacagcgaggaa
gacgatgacgaaggacctgtcagagcctggtcaagccagaccagcctgcaccacacagag
gacagggatcgtccggcgtcgtcgtgcagccagaccagtgcggtggtcaacgagcgtctc
caggagctggtcaagatgttcaaggaacggacggagaaggccaaggagaaactcatcgac
ccagtgagctctgacgacgacagcgacatcacccgtaaggcccccacccccccacacttt
gtacttcattcatccccgccggctccgcccccgcccgcggtgcctcaggtagctaaagag
gaggcgccgccggggagtgcctcagcaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggaggggaggaagggcctgaggaaggcgaggtgaagacagggaggtgctgc
aaggtgctcaaagtccctcgttggatcggagcgtgcgtgaggctccgtttcccctccagc
atcgaccccttcaccaacctgatgtatgtgctgtggctcttcctggtgaccctggcctgg
aactggaacgtgtggttgatccccgtgcgctgggccttcccctaccagacgcccaccaac
atctactactggctgctcaccgactactgctgtgacctggtctacctgctggacatcacc
ctgttccagccacgcctgcagtttgtccgtgggggggacatagtgtgtgacagaaaggac
atgagaaaaaactacatgaagactaaccgcttcaagctcgatgtagtcagcctggtaccc
ctggagttcttctacttcatcacagggatcaaccctctactccgtctccccagactactg
aagtacaactcattcttggagttcaacaatcgcctggaggccatcctgactaaagcctac
atctaccgcgtgatccgaaccaccacctaccttttgtactgtctccactgcaacgcctgc
ctcttctactggggctcggcctacgaaggcctgggctccaccaaatgggtctacgacgga
gtgggcaacggctacatccgttgctactactttgcggtgaagaccctcatcaccatcggg
ggtctgccagatcccaccaacctcttcgagatcgtctttcagctcatcaactactttgta
ggagtgtttgccttctccatcatgattggccagatgcgagacgttgtgggggcggccaca
tcgggccagacccactaccgagcctgcatggacaacaccatcaaatacatggccacctac
cggatcccaaaggatgtccagaaccgcgtcaagacctggtacaactacacctgggcttcg
caaggcatgctggatgaacaggaactgctgtctcagctcccagacaaaatgcgtctggac
atcgccgtggacgtcagctactccatcgtcagcaaggtccctttgttccagggatgtgat
cgccagatgatctttgacatgttaaagagcctgcggtctgtggtttacctgcccggggat
tacgtctgtaagaagggcgaggtgggccgggagatgtacatcatcaaggcgggggaggtc
caggtggttggcggaccggacgggaagaccgtcttcgtcacgctcagagcgggatctgtc
ttcggggagataagtctcctggcagtagggggcggtaacagacgcacggccaacgtgatc
gcccacggcttcgctaacctcttcatcctggacaagaaggacctgaacgaaatcctggtc
cactaccccgagtctcagaagctgctccgcaagaaggccaggaagatgctgaacaacggg
aagaagccagagcccaaaccggagaccaaggcaacgttcccggcccccccgcccagggca
gagacccccaggctgctacgagcggccctggagatggcggagaaggcgtcgggactcaaa
ggagccctggcgaaggtcaaggctggctccaagtccagtgtctccctacagcgctccgac
tcctccacggctgccacgccttcgccggcccccccgcgggtccccaccgggactcggcca
cgccctcctccgccagctccgcaacgctgcgttcaccggcccggcggctcgccggcagcc
ctttggcgacgcgccccgcgtcccgttctcatgccgaccgaacccagtcgcccgtggcta
cgggacatggacaagagttggggaagggggagaagggggaggggaaagagggag
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