KEGG   Gadus morhua (Atlantic cod): 115550791
Entry
115550791         CDS       T10832                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115550791 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115550791 (wdr61)
Messenger RNA biogenesis [BR:gmh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     115550791 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP eIF2A Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_VPS8 Tricorn_2nd Beta-prop_NWD2_C Beta-prop_WDR41 PROPPIN Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_HPS5 NBCH_WD40 Beta-prop_NUP159_NUP214 Cytochrom_D1 Beta-prop_WDR75_2nd WD40_like WDR54 WD_LRWD1 VPS8_N Beta-prop_IFT122_2nd Nucleoporin_N DUF7899 DUF2415 Beta-prop_DCAF12 Beta-prop_pof12
Other DBs
NCBI-GeneID: 115550791
NCBI-ProteinID: XP_030221953
Ensembl: ENSGMOG00000009216
LinkDB
Position
9:complement(4672510..4677655)
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGRSEADSTDTIVTGSLDDMVKVWKWSDEKLELQWNL
EGHQLGVVSVDISHDGAIAASSSLDAHIRLWDLDSGKQIKSMDAGPVDAWSVAFSPDSKH
IATGSHHGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLSVAF
SPDHAHFVSSSSDKSVKVWDTNSRVCVNTFFDHQDQVWSVKYNNTGSKIISAGDDRAIHI
YDCPM
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacccagtacagcatcctgttcaagcaagaacatgcgcatgacgatgcaatctgg
acggcggcatggggccgtagcgaggcggacagcacagataccatcgtcaccggctctctg
gacgacatggtgaaggtgtggaagtggtcggacgagaagctggagctccagtggaacctg
gagggccaccagctgggcgtggtctcggtggacatcagccacgacggggccatcgccgcc
tccagctccctcgacgcccacatccgcctctgggatctggactctggcaagcagatcaag
tccatggacgcaggccccgtcgacgcgtggtctgtggccttctccccggactcgaaacac
attgccacgggcagccaccatggcaaggttaacatcttcggagtggagagcggcaaaaaa
gagtactcgctggacaccaggggaaagtttatcctcagcatcgcttacagcccagatgga
aaatacctggccagtggagccatagatggaatcatcaacatcttcgacatcgctactggc
aaactactccatacgctggaaggtcatgccatgcccatcagatctctcaccttctccccg
gactcccagctgctcgtcaccgcctccgatgacggatacataaagatctatgacgtacaa
cacgccaacctggcaggcactctcagtggccacgcctcctgggtcctcagcgtggccttc
tcccccgaccacgcccactttgtctccagctcgtcggataagagtgtgaaggtttgggac
acaaactccagagtgtgtgtcaacactttcttcgaccatcaagaccaggtttggagcgtc
aagtacaacaacacaggctctaagatcatctctgcaggagacgaccgcgccatccacatc
tacgactgccccatgtga

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