Gadus morhua (Atlantic cod): 115550851
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Entry
115550851 CDS
T10832
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
Brite
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115550851
Coactivators
SAGA/TFTC/STAGA complex
115550851
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115550851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115550851
NCBI-ProteinID:
XP_030222055
Ensembl:
ENSGMOG00000005431
UniProt:
A0A8C5B2Z9
LinkDB
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Position
9:19218069..19247563
Genome browser
AA seq
991 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLGNQKTSTASYSENKGEGPSGAVKQFSGK
VRDQVGSLEQPQQGHPKAGLNQEPSANEALPNKILASTTSSVTTGSVINAGSNLQTLGAS
STISHVPGSVTLATPSAAASFNRATALGSAGTSVVTAPNPNIITTAGLRAASPGLQSLNG
NTGGVKLVNAPAIAPQAGANSVISTVSAGSSNIIVSMSSQPNFTVPQSSVASTITLPRHP
SPLSSLSQNGVDPKGSPLITQGVASSTVTTSQVMNHNNPLMHTKMLVPNQPVSGNSVILG
STPPPAANSPISQTVTSTTVTLAAGMKPAVNGVGQPAVTIVRHPTTPVMATSIQQQRPGL
VANTTRTAAPQIAVRPQQQTTIQLPPGFTIPPGMVLVRTETGQLVMVPQQVLAQAQAKSQ
QGQAVSNISPRPATPTAGATIRVSAPSPLPGTTQTVRLASPNQPRMVQAGSPSPSVVQAI
TVAPAGAGVSGKMSNPPPKPGTVITAGGHALAKPVGVQPGLAMAGGTPGTGVSPAQPRTA
IVSQEMQENVKKCKNFLATLIKLASHNSPSPDTSKNVKTLVQDLLDAKIEPEEFTSRLQA
ELKSSPQPYLIPFLKKSLPALRQSLLNNQQSLMASGNAPTQVSPAATSTIRARLPNSPVM
TPVRTPTPLVNNTAMGVRRQALPAVQTRMPMVITQTLRTPGAVVRGPPIIAGKSPANLAV
QANQKKLSDPGGGFRDDDDINDVASMAGVNLNEENARILATSSELVGTKIRSCKDEAFLP
TGLLHRRILDTAKKLGVTEVPAEVVNYISHATQSRLRSLLEKVSAVAQHRGEGGKDEEWA
EQSSDVRAQLRFFEQLERMEKQRKDDQEREILLKAAKSRARQEDPEQARLKAKAKEMQQQ
EQAQIRQRDANLTALAAIGPRKRRKMDSPGSSNAGAEVASSSGSGNSPGGSSSRQQLRTR
ITRVNLRDFIFCLEQERTTSRSLLLYKALLK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtagatgagaaagca
gttagcgacttagttggctctttggaatcacaacttggtaatcaaaagacttctactgct
tcgtattccgagaataaaggagagggaccttcgggcgctgtcaaacagttctcagggaaa
gtgcgtgatcaagtggggtctctggagcagccacaacaagggcatccaaaagcggggtta
aatcaggaacctagcgccaatgaggctctcccgaacaaaatactcgcatctactacctct
tccgttactaccgggagcgttataaacgctggatctaatttacaaacacttggggcatct
tctactatttctcatgtaccgggatccgtaactttggcgactccgtctgcagctgctagc
ttcaacagggctactgctctgggttcggcgggcacatcggtagtgaccgctcctaaccca
aacatcatcacaacggcgggtctaagggctgcttcccctggattacaaagtttaaacggc
aacaccggaggtgtgaagttggtgaacgcacccgccatcgctccacaagccggagccaac
agtgtcataagtactgttagtgctggtagctccaatattatcgtgtccatgtcctcccag
cctaactttactgtaccacagtcgtcggtggcttctacaatcacattaccgagacaccct
agcccattgtcgagtttgtcccagaatggtgtagaccctaagggttcccctctcattacc
caaggtgtagcttcctctacggtcactacatctcaggtcatgaatcacaacaaccctctc
atgcatacgaagatgttggtgcccaatcaacctgtttctggaaactctgtaattctcggc
agtactccgccacctgcagctaactcacccatcagccagaccgtgacaagtaccactgtc
acacttgcggctggtatgaaaccagccgtcaacggagttggtcagccggcggtgactata
gtgaggcaccccacaacgcctgtaatggcaacgtcaatccagcagcagagaccaggtctg
gttgcaaacaccacaaggactgctgcgcctcagatagcagtcagacctcaacagcagact
accattcaacttcctccgggatttaccatacctccaggcatggtcctggtgcgtactgag
acgggccagttggtgatggtcccccagcaggttctggcccaggcccaggcaaagagccaa
cagggccaggcggtgtccaacatctcccccaggcctgccaccccaacagccggcgccacc
atccgagtcagcgcccccagtccgcttcccggtacaacccagactgtccgcctggcctcc
ccaaatcagcccagaatggttcaggccggttccccctctccctccgttgtacaggccatc
acagtggcgcccgctggagccggcgtctcggggaagatgagcaaccctccccccaagccc
gggacggtgatcaccgcgggggggcatgcgctggccaagcctgtgggggtccagcccggc
ctcgccatggccggtgggacgccagggacgggcgtctcccccgcacagccccgcacagcc
atagtgtcacaagagatgcaggaaaacgtgaagaaatgtaaaaacttcctggcgacactg
atcaagctggcatcccataattccccctccccggatacctccaagaatgtgaagaccctg
gtgcaggatctactcgatgcgaagattgagcctgaggagttcaccagccgcctgcaggct
gaactcaagtcctcacctcaaccctacctcatccccttcctcaagaaaagccttcccgcg
ctgcgccagtccctgctcaacaaccaacagtctctaatggcctccggcaacgcccccacc
caagtgtccccggccgccacctccaccatcagagcccggctccccaacagccccgtcatg
acccccgtcaggacgcccacgccgctcgtaaacaacaccgccatgggtgtcaggagacaa
gcgctcccggcagtccagacccgcatgcccatggtcatcacccagaccctcagaacccca
ggtgcagttgtgaggggacctcctatcatagcaggtaaaagtcctgctaacttggcagtg
caagccaatcagaagaagctgagtgacccagggggcggtttcagagacgacgacgacatc
aacgacgtggcgtccatggccggggtcaatctcaacgaggagaacgcacgtatcctagca
accagctcggagctggtgggcaccaagatccgctcctgcaaggacgaggccttcctgccc
accggcctgctgcaccgtcgcatcctcgacacagccaagaagttgggtgtgaccgaggtc
ccggccgaggtggtgaactacatttcccatgccacccagtcgcgattgcgctccttgctg
gagaaggtgtcggcggtggctcagcaccgcggtgaaggcgggaaggacgaggagtgggcg
gagcagtcctcagacgtgcgcgctcagctgcgcttcttcgagcagctggagcgcatggag
aagcagaggaaggacgaccaggagagggagattctactcaaagcagccaagagtcgtgcc
cggcaggaagacccggaacaggcccggctcaaggctaaggctaaagagatgcagcagcag
gagcaggctcagatccgccagcgagacgccaatctcaccgccctggccgccatcgggccc
cgaaagagacgcaagatggactcaccagggtcctccaacgccggggcggaggtggcctcg
agctccggctccggtaactctccgggggggagctcctcgcgccagcagctccgtacgcgg
atcacaagagtcaacctcagggacttcatcttctgtctggagcaggagcgcaccacgtcc
aggtccctgctgctctacaaggccctgctgaagtga
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