Gadus morhua (Atlantic cod): 115550858
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Entry
115550858 CDS
T10832
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04115
p53 signaling pathway
gmh04120
Ubiquitin mediated proteolysis
gmh04137
Mitophagy - animal
gmh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115550858 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115550858 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115550858 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
115550858 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115550858 (siah1)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115550858 (siah1)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
115550858 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
115550858
NCBI-ProteinID:
XP_030222067
Ensembl:
ENSGMOG00000013178
UniProt:
A0A8C4ZIM2
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All DBs
Position
9:17435286..17450437
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AA seq
286 aa
AA seq
DB search
MDEEMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatgagtcgccagaccgccaccgcgctgccgacaggaacctccaagtgc
cccccctcccagcgcgtgcccaccctgtcgggcaccaccgcctccaacagtgacctggcc
agcttgtttgagtgccccgtctgcttcgactatgtcctgcctccaatcctgcagtgccag
tcgggacacctggtgtgctccaactgccggcccaagctcacctgctgccccacgtgccgg
gggcccctcggctccatccggaacctggccatggagaaggtggccaactcggtgctcttc
ccctgcaagtacgcgtcgtcgggctgcgaggtcacgctgccgcacacggacaaggcggag
cacgaggagctgtgtgagttccggccgtactcctgcccctgcccgggggcctcctgcaag
tggcagggctcgctggacgccgtcatgccccacctgatgcaccagcacaaatccatcacc
acgctgcagggggaagacatcgtgttcctggccacggacatcaacctgcccggcgccgtg
gactgggtgatgatgcagtcgtgtttcggcttccacttcatgctggtgctggagaagcag
gagaagtacgacggccaccagcagttcttcgccatcgtgcagctcatcggcacgcgcaag
caggccgagaacttcgcctaccgcctggagctcaacgggcaccggcgccggctcacgtgg
gaggccacgccgcgctccatccacgagggcatcgccacggccatcatgaacagcgactgc
ctggtgtttgacacgtcgatcgcacaactgtttgcggagaacgggaacctgggcatcaac
gtcaccatatccatgtgctga
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