Gadus morhua (Atlantic cod): 115550979
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Entry
115550979 CDS
T10832
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115550979 (dennd4a)
Membrane trafficking [BR:
gmh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115550979 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR
PPR_long
Mucin
DUF3005
Motif
Other DBs
NCBI-GeneID:
115550979
NCBI-ProteinID:
XP_030222254
Ensembl:
ENSGMOG00000008354
UniProt:
A0A8C5ALY5
LinkDB
All DBs
Position
9:complement(22067880..22091629)
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AA seq
1777 aa
AA seq
DB search
MMEDNGPRVVDYFVVAGLTATSKPLEEELHLADHACARSARNNAPITDVAVVIRSLGEEV
PPGFTSVDSTPTGLSAELNGASLRGPQIFLCFKRGRDKPPLTDLGVLYEWKEKLKPGCHI
VQTTPSGRPANISSSSSQRIYITYRRAPQIQPHSSLAVTDVCIIIPGKGETSPHTFCKVD
KNLNSSMWGSSVYLCYKKSLAKTNAIAYEAGLLCRYPEEDYESFPLPEPVPMFCLPMGAN
IECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYARESLTDRQRAQLGLQTSDLH
DGTRSVHSNKSICLLSHWPFFQAFRSFLTFLYRYSISGPHALPLEKHISHFMRTVPFPSS
QRPRILVQLSPHDSVILSQPVSSPLPLSGGSLSTLLLNLGPKNAASLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGMDSRYFDLYVPP
ADITCVDLDTNTIFHKEDKRALTWKVLPRRACKHLLNTLGKIYQQLVDGGQLSGQEGQME
QTLTDSELNGGKSLHTLELEIQEAFLRFMAAILRGYRSYLLPITKAPSEKTTDASSLFDH
QGFLKSRDRSHHKFYSLMTKTQLFIRFIEECSFVSDKDTSLAFFDECVDKLFSTGGKQVD
SERPEETRLIDLDESHHSEHTVYINPPELPLLPAGEEHPLCYSYSGFPVLNANLLETFVG
SNPPSASMAPRHNHPASPTAIFRRSKQEIKLAQKMAKTQSSMPQLWSRCLLRHCYGLWFI
SLPALVSSSPSKVRALRTAYDLLRKMQDDKLQAPDEVCYRVLMQLCGQYGQPVLAVRVLF
EMKKAGVQPNAITYGYYNKAVLESTWPSSTRGGYFLWGKLRNVVLGVLQFKQVGRKELPA
LRDPQASDGSDLDTVSHGSLDSVNDSNERTSIDADFNKMDSSDDGCSTGGQSDQGYDSLS
KEEERVNDNTPLVDQKTKDTHRKSSSEHDESPPFSQASLSVQSALSSNSIAGDGVSGTRS
GPSQDDGPAPCGVSPKKERPKSLFLPCGQWPPRPNALALGSAKQPHLTAVRLRGVEEEEL
DAGKNKQRALVGQSGSCRSGAESPGGNTTPTSTPTTTTTTTPTTNTQSPGRTVRPSGGAV
SKSDMERGFDPLSLMAAEAEQSQLASPGAPPTPLRGLAEEIETYMNNGGSPSRVCSSVPD
PPRDPPATAGPEADPPACATPSPHQPHPLLRANSSLQLRVRSRERLSTSPSLPLGVSPRD
RPSSLVSPSSPSPSASSFSMESLFTPTLDIFKTSFFSAGKGVAEKASRLYSRLSSQTSLS
QDANCDQMSISSLTSGDPECCSLLDADSYLDPDVFTSPQHGSLARLRRSPASGFRTALDS
PGTPSRVFRHNSFSGALTPFPRGPHTPDSSPDVGRFYPTHNYTVEVLMSSCSLCKTCDSL
VYDEEIMAGWTADDSNLNSTCPFCGTPFVPFLNVHIRDLRPLSSQSTEEEGNPVSEEEDT
STSLTPGAEPSAGPSPAAPSHPDAPGGSGTPVAPEPAPPQQPPAAPVTVPYLSPLVLWKE
LESLLGNEGEQVICTPSIVDQHPIVFWNLVWYFKRLELPSNLPALIMASQHCRHGDQTSP
SVSTEDDKYVLVRIMWDNLKLHQDQVQPCYVLWNTHCANSLVRSGLCEAGQLFTVEQLQS
IVRSIKKSDVYHPMSHIIQLLGPEMGFKRQRSLYRDILFLALVALGSSNINMDAFDREYK
MAYDRLTPGQVMLTHNCDRPPGAGVMECRRTFGELGL
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaacggacctcgtgtggtggactactttgtggtcgctggcctcaccgcc
acgtccaagcccctggaggaggagctccacttggcggaccacgcctgtgcccgctccgcc
aggaacaacgcgcccatcacggatgtggcggtggtgatccgctcgctgggcgaggaggtg
ccccccggcttcaccagcgtggacagcacgcccacgggcctctcggccgagctcaacggg
gccagcctgcgcgggccgcagatcttcctgtgcttcaagcggggcagagataagccaccg
ctgacagacctgggcgtgttgtacgagtggaaggagaagctgaagccgggatgccacatc
gtccagaccacgccctccggtcgcccggcgaacatcagcagctcctcgtcgcagcggatc
tacatcacctaccgccgcgccccccagatccagccccactcctccctggccgtcaccgac
gtctgcatcatcatcccgggcaagggggagacctcgccacacaccttctgcaaggtggac
aagaacctcaacagcagcatgtggggatcctcggtttacctgtgttacaagaagtctctg
gctaaaaccaacgcgatagcatacgaagcagggctgctgtgtcggtaccctgaggaggac
tatgagtccttccccctgcccgagcctgtgcctatgttctgccttcccatgggggcgaac
atcgagtgctggccagctcacaccaagcactccctgccagtcttctccaccttcgtcctg
actggagcctccggggaaaaggtgtacggggcagctatccagttctacgagccctacgcc
cgggagagtctgacagaccgccagcgtgcccagctggggctgcagacgtccgacctccac
gacgggacccgcagcgtccatagcaacaagagcatctgcctcctctcccactggcccttt
ttccaggccttccggagtttcctcacattcctctatcgatactccatctccgggccgcac
gcactgccactggaaaagcacatctcccacttcatgcggaccgtccccttcccctcctcg
cagagaccacgcatcctcgtgcagttgtctccgcatgacagtgtgatactgagccagcca
gtgtcttctccactgccactcagtggtggcagcctctccacactactcctgaatctgggt
ccaaagaacgcggccagcctgttggtgctggcggtgacagagcataagatcctggtccac
tcgctgcgaccggccgtactgacaagcgtgacggaggcgctcgtgtctatgatcttcccg
ttccactggccgtgcccctacatcccgctgtgcccgctggccctggccgatgtgctcagc
gccccgtgtcccttcatcgtgggcatggactcccgctactttgacctctatgtgcctccc
gccgacatcacctgtgtggacctggacacaaacactatctttcataaggaggacaagaga
gctctgacttggaaggtccttcccaggagggcttgtaaacacttgctcaacaccttaggc
aagatttaccagcagcttgttgacggtggacagctgagcggtcaagagggccagatggag
cagacactcaccgacagcgagctcaacgggggcaagagcctgcacaccctggagctggag
atccaggaggcctttctgcgcttcatggccgccatcttgcgaggctaccgctcctacctg
ctgcccatcactaaagccccatctgagaagaccaccgacgccagctccctctttgaccac
caaggattcctcaagagccgtgaccgatctcatcacaagttctactccctgatgaccaag
acccagctgttcatccgcttcatcgaggaatgctcatttgtcagcgataaggacaccagc
ctggccttcttcgacgagtgtgtggacaagctattctcaacaggtggcaagcaggttgac
agcgagagaccggaggagaccagactgatagacctggacgagtcgcaccactcggagcac
acggtgtacatcaaccccccagagctgcccctgctccccgcgggagaggagcacccgctc
tgctacagctactccggcttcccggtgctcaacgctaatcttctggagacgtttgtgggg
tccaatcctccgtcagccagcatggctccacgccacaaccacccggccagccccacagcc
atattcaggcgctccaagcaggagatcaagctcgctcagaagatggcaaaaacccagtcg
tccatgccccagctgtggtcccggtgcttgttgcgccactgctacggcctgtggttcatc
agtctgccagcgctggtcagctccagcccctccaaggtgcgggcgctgcgcaccgcctac
gacctgctcaggaagatgcaggacgacaagctgcaagctcccgacgaggtgtgctaccgg
gtgctgatgcagctgtgcggtcagtacggccagccagtgctggctgtcagggtgctgttt
gagatgaagaaagccggggttcaacccaacgccatcacctacggctactacaacaaggcg
gtgctggagagcacctggccctccagcacccgcgggggctacttcctgtgggggaagctg
aggaacgtggtgttgggggtcctccagttcaagcaggtggggaggaaggagctgccggcc
ctcagggatcctcaggcttcagacggcagtgatctggacacggtcagccacggcagcctg
gacagcgtcaacgactccaacgagcgcacttccatcgacgccgacttcaacaaaatggac
tccagcgatgatggatgtagcacaggcggccagtcagaccaaggctatgattcactctcc
aaagaggaagaacgagtgaacgacaacacaccactggttgaccaaaagacaaaagacaca
catcggaagtcctcatctgaacacgatgagtcccctcccttcagccaagcatctcttagt
gtccagagtgcactgtcttcaaacagcatcgctggggacggcgtcagcggaacgcgctca
ggtccttcccaggacgatggccccgcgccctgtggggtctcaccgaagaaggagaggccc
aagtctctgttcctgccctgcggccagtggcccccgagacccaacgccctggccctgggc
tccgccaagcagccccacctgacggccgtgaggctgcgtggggtggaggaggaggagctg
gacgctgggaagaacaagcagagagccctggtggggcagagcgggagctgcaggagcggg
gcggagagtcccggtggtaacaccacccccacttccacccccaccaccaccaccaccacc
acccccacaaccaacacccagtccccagggcggacagtcaggcccagtggtggggcggtg
agcaagtcggacatggagcgcgggttcgatcccctgtcgctcatggcggccgaggcggag
cagagccagctggcctcccccggcgccccgcccacgcccctccgcgggctggccgaggag
atagagacctacatgaacaacgggggtagcccctccagagtgtgcagctctgtcccggac
cccccccgggacccccccgccacggccggcccggaggcagacccgcccgcctgcgccacg
ccctccccacaccagccccacccgctgctccgcgccaactccagcctccagctccgggtc
cggtcccgggagcgcctcagcacgtcgccgtcgctgcccctcggcgtgtcccccagagac
cggccctcgtcgctggtctccccctcctcgccctcgccctccgcctcctccttctccatg
gagtccctgttcacccccaccctggacatcttcaagaccagcttcttctccgccgggaag
ggcgtggcggagaaggccagccggctgtactcccggctctcgtcccagacctccctgagc
caggacgccaactgcgaccagatgagcatctcgtccctgacctcgggggaccctgagtgc
tgctccctcctggacgctgactcctacctggaccctgacgtcttcacgtccccccagcac
ggcagcctggcccgcctcaggaggagccccgcgtcgggcttccggaccgccctggacagc
cccgggacccccagccgggtgttcagacacaactccttctcaggtgctttgactccgttt
cccagaggcccccacactccagactcctcgcctgatgtgggccgcttctaccccactcac
aactacaccgtcgaggttctgatgtccagctgctcgctgtgcaagacctgcgacagtctg
gtgtacgacgaggagatcatggcgggctggacggccgacgactccaacctcaacagcacc
tgtcccttctgcggcacgcccttcgtgccgttcctcaacgtgcacatcagggacctgagg
cccctcagcagccagagcactgaagaggaaggtaatcctgttagcgaggaggaagacacg
tccacgtcactgacccccggggcagagccctccgcggggccgtctcctgccgctccctcc
cacccggacgcccccggcggctccggcacgccggtggccccagagccggccccgccccag
caaccccccgcggccccggtgacagtgccctacctgagccccctggtgctgtggaaggag
ctggagagccttctggggaacgagggcgagcaggtgatctgcacccccagcatcgtggac
cagcaccccatcgtgttctggaacctggtgtggtacttcaaacggctggagctgcctagc
aacctgcccgcgctcatcatggcttcgcagcactgtcgccatggagaccagacttctccc
agcgtatccacggaggacgataagtacgtgctggtgaggatcatgtgggataacctgaag
ctgcaccaggaccaggtccagccctgctacgtgctgtggaacacacactgtgccaactcc
ctggtccgctcggggctttgtgaggcggggcagctcttcacggtggagcagcttcagagc
attgtgaggtccattaagaagagcgacgtctaccatcccatgagccacatcatccagctc
ctgggccccgagatgggcttcaagagacagcggagcctgtaccgtgacatcctgttcctc
gccctggtcgcactgggcagcagcaacattaatatggacgcgttcgaccgcgagtacaag
atggcgtacgaccggctgactcccggtcaggtcatgctgacgcacaactgtgaccgaccg
ccgggcgcgggggtcatggagtgcaggaggacttttggggagctcggactctga
DBGET
integrated database retrieval system
