Gadus morhua (Atlantic cod): 115551009
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Entry
115551009 CDS
T10832
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04150
mTOR signaling pathway
gmh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115551009 (lrp5)
04150 mTOR signaling pathway
115551009 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115551009 (lrp5)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115551009 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
115551009
NCBI-ProteinID:
XP_030222326
Ensembl:
ENSGMOG00000016796
LinkDB
All DBs
Position
9:complement(13476349..13513715)
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AA seq
1655 aa
AA seq
DB search
MDLRWRRLAMGILLKELVLLWSCLVWIVHGSPLLLFANRRDVRLVDAQGVRGESAVVVGD
LEDAAAVDFLYSEGLIFWTDVSEEAIKQTHWNQSTNSFKEALGTGQTAVVSGLDSPDGLA
CDWLGRKLYWTDSETNRIEVANLDGSSRKVLFWQDLDQPRAIALNPAHRSMYWTDWGEDP
RIERAGMDGSNREVIVVREIYWPNGLTIDLVEQKLYWADAKLSFIHKANLDGSAREPVVE
GTLTHPFALTLSGETLYWTDWQTRSIHACNKHNGAEAREILNGIYSPMDIQVLGPQRQPY
IHTPCSDLNGGCSHLCLLSPVEPFHSCACPTGVQLRQDGKTCKPGAEQVLLLARRTDLRR
ISLDLPDFTDIVLQVEDIRHAIAIDYDPVDGHVYWTDDEVKAIRRSRIDGSDAVTLVNTE
LDHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVSGFMY
WTDWGERPQIERANLDGSERLVLLNTSLGWPNGLAIDHAAGKLYWGDAKTDKIEVINVDG
SNRLTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKAT
KVTEAHGTNGCAAGNGGCSHLCFWHVQGARCACPMGLELLPDLQTCVVPEAFLLFTNRDS
IRSISLGTNSNDVAIPLTGVKEASALDFDVSENRIYWTDIQSKTISRAYMNGSSLEHVIE
FGLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLENPRSLDNPRSLAL
DPANGYMYWTEWGGRPRIARAYMDGSVIGTLVDKVGRANGLTIDYLDHRLYWTDLDTCMI
ESTNMQGLQREIVVDELPQPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLE
LMLDILVFHSSRQDGANDCSLNNGDCTHLCLATPAGAQCRCASHYTLDSDRHNCSSPSSF
LLFSQKSSISRMVLGEQSPDIILPIHVLKNIRAVSYDPLDRMVYWLDGRQNIRRARDDGT
MAATVVGGGAAQPADKQPHDLSLDAYSRHVYWTCESSNTINAQRMDGHGVGVVLKDDTDK
PRAIVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLAKLFW
VDADLKRIESSDLTGANRVVLQDSNILQPMGLSILGDHLYWIDRQQQMIERVDKVSGDKR
TRIQGRISYLTSIHAVEEMDPLEFASHPCSRDNGGCSHICIAKGDGTPRCSCPVHLVLLQ
DLLHCGEPPTCSTEQFTCSTGDIDCIPKAWRCDGFAECDDNSDEEGCPVCLPSQFQCDKG
GCVDGALRCNGEPDCTDHSDELDCDVICSLNQFRCGDNQCITKKQQCDQYSDCTDSSDEL
GCDPPLSSDLPSSSSTIGLFIAFILLVFVIIVYFVCQRLVCRRYKGTAGSFPHEYISGTP
HVPLDFIDPSTSQHGTFQGIACGKSIMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTK
GAFYPQILNPPPSPATDRSLYNAEVFYSSNSPSTTRSYRPYHHAVRGAAPPTTPCSTDVC
DSDYGPRRLPGSSMGPGSASGGPSRWKVSVGHGGHHSKHNKYYMDLNSDSDPYPPPPTPL
SQYLSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaggtggagacgacttgcaatgggaattttactcaaggaattggtgttgctt
tggagttgcttggtgtggatagttcacggctcgcctctcctgctgtttgccaaccgccgc
gacgtgcgtctggtggacgcgcagggcgtgaggggcgagtcggcggtggtggtgggcgac
ctcgaggacgcggcggcggtggacttcctgtactccgagggcctgatcttctggaccgac
gtcagcgaggaggccatcaaacagacccactggaaccaatcgaccaactcgtttaaagaa
gcactcgggacaggccagactgctgttgtatcaggattggatagtccggacggcctggcg
tgtgattggctgggcaggaagctttattggacggactcagaaaccaatcggattgaagtg
gccaatctggatggaagttccaggaaagtcctgttttggcaagacctggaccagccgagg
gccatagctctgaacccagcccatcgctcaatgtactggacggactggggggaggacccc
aggatcgagagggcagggatggatggcagcaacagggaagtgattgtggtgagagagata
tactggcccaatgggctgaccattgacttggtggagcagaagctgtattgggccgatgca
aagctcagcttcatccacaaagctaacctagatggatctgcacgtgagccggtggtggag
ggcaccctgacccacccgttcgccctgacgctgtctggggagaccttgtactggacggac
tggcagacacgctccatccacgcctgcaacaagcacaacggggcggaggcccgcgagata
ctcaacggcatctactctcccatggacatccaagtgctgggaccccagagacagccctac
attcatactccatgcagtgacctaaacggtggctgtagccacctctgcctgctgtctcca
gttgagcccttccacagctgtgcttgccccacgggagtgcagctcagacaggatggaaaa
acgtgcaaacccggagcggagcaggttctgctgctggcccggaggaccgacctgaggagg
atctcactcgacctgcccgacttcactgacatcgtgctacaggtcgaggacatccggcac
gccatcgctatcgactacgaccccgtggacggccacgtgtactggaccgacgacgaggtc
aaggccatccggcgctcccgcatcgacgggagcgacgccgtcaccctggtcaacacggag
ctcgaccaccccgacggcatcgccgtggactgggtggcccgcaacctgtactggaccgac
acgggcacggaccggatcgaggtaacgaggctcaacggaacctcccgcaagatcctgatc
tccgaaaacctggacgaaccgcgagcgatagtcctggaccccgtcagcggcttcatgtac
tggacggactggggcgagcgaccccagatagagagagccaacctggacgggtcggagcgt
ctggtgctgctcaacacgtctctgggctggcccaacgggctggccatcgaccacgccgct
gggaagctgtactggggggacgccaagacggacaagatagaggtcatcaatgtggacggg
agcaacagactgaccctgctggaggataagctcccccatatctttggcttcacgctcctg
ggcgactacatctactggacggactggcagcggcgcagcatcgagcgggtgcacaaggcc
acggctgtgagggagatcatcatcgaccagctgcccgacctgatgggcctcaaggccacc
aaagtgaccgaggcgcatggtactaacggctgtgcggcaggcaacggaggctgcagtcac
ctgtgtttctggcacgtccaaggggcccgctgtgcctgccccatgggcctggagctgctg
ccagacctgcagacctgcgtggtgcccgaggccttcctgctcttcacaaacagggatagt
attagaagtatatcactgggcaccaacagtaacgacgtggccattcctctgaccggagtg
aaagaggcctcggctctggactttgacgtctcagagaacagaatatactggacagatatc
cagtctaagacgatcagccgagcgtacatgaacggcagctctctggagcacgtcattgag
tttggcctggactaccctgaagggatggccgtggactggatgggccgcaacatctactgg
gccgacaccggtaccaaccgcatcgaggtggcccggctggacggccagtaccgccaggtt
ctggtgtgcaaagatttggagaacccgcgctcactggacaacccgcggtccttagccctg
gatccagccaatgggtacatgtattggacggagtggggcggtcggccgcggatcgccagg
gcctacatggacggcagcgtcatcgggaccctggtggataaagtgggccgggccaacggc
ctcaccatagattacctggaccaccggctgtactggaccgacctggacacgtgcatgatc
gagagcaccaacatgcagggtcttcagagggagatcgtagtggatgaactccctcagccc
ttcggcctgacccagtatcgggacttcatctactggaccgacttcaacctgcgaagcatt
gagcgagctgacaagcgcagcgggctcaaccgcacggtggtactgcagggccagctggag
ctgatgctggacatcctggtgttccactcgtccaggcaggacggagccaacgactgctcc
ctcaacaatggagactgcacccatctgtgtctggccacgcccgccggcgcccagtgccgc
tgtgcctcgcactacaccctggactctgacaggcacaactgcagctcgccctccagcttc
ctgctgttcagccagaagtcgagcatcagccgcatggtcctgggggagcagagcccggac
atcatcctgcccatccacgtgctgaagaacatccgcgccgtgagctacgacccgctggac
agaatggtgtactggctggacggacggcagaacatccgacgggcccgcgacgacggcacc
atggcggccacggtggtgggcgggggtgcggcccagccggcggacaagcagcctcacgac
ctgagcctggacgcgtacagccgccacgtgtactggacctgcgagagctccaacaccatc
aacgcccagcgcatggacggccacggcgtgggcgtggtcctcaaggacgacacggacaag
ccccgcgccatcgtggtcaacgccgagaaagggtacatgtacttcaccacggtgcaggag
cgctcggccaagatcgagggggccagcctggacggcacggagagggagtccctgttcacc
acggggctgatccggcccgtggcgctggctctggacaacaagctggccaagctgttctgg
gtggacgccgacctcaaacgcatcgagagcagcgacctcacgggagccaaccgggtcgtc
ctgcaggactccaacatcctgcagcccatgggcctcagtatcctgggggaccacctgtac
tggatcgaccggcagcagcagatgatcgagagggtggacaaagtgagcggagacaagcgc
acccgcatccagggccgcatctcctacctgacctccatccacgccgtggaggagatggac
ccgctggagtttgcatcccatccttgttcccgcgacaacggtggctgctctcacatctgc
atcgccaagggtgacgggacgccgcgctgctcgtgtcccgtgcacctggtgctcctgcag
gacctgctccactgtggagagccccccacctgctccacggagcaattcacctgctccacg
ggggacatcgactgcatccccaaggcgtggcgctgcgacggcttcgccgagtgcgatgac
aacagcgacgaggagggctgcccggtgtgcctcccgtcccagttccagtgtgacaagggc
ggctgcgtggacggcgccctgcgctgcaacggggagcccgactgcaccgaccactcggac
gagctcgactgtgatgttatatgttctctcaaccagttccgttgtggggacaaccagtgc
atcaccaagaagcagcagtgtgatcaatactctgactgcacggatagctcagacgagctt
ggctgtgacccccctctgtccagcgacctgccctccagctcctccaccatcggcctgttc
atcgccttcatcctgctggtgtttgtgatcatcgtgtacttcgtgtgccagcgccttgtg
tgccgccgctacaagggcaccgcgggctccttcccccacgagtacatcagcggaacgccc
cacgtgccgctcgacttcatcgaccccagcacgtcgcagcacggcaccttccaaggtatc
gcctgtggcaagtccatcatgagctcggtcagcctgatgggcagcagcagcagcggcgcc
cctctctacgacaggaaccacgtgaccggggcctcctccagcagctcctcctccaccaag
ggagccttctaccctcagattctaaaccctccgccctcccctgctactgaccgatccctc
tacaatgcagaggtcttctactcttccaatagcccatcaactaccagatcatacaggccc
taccaccacgcagtgcggggcgccgctccccccaccaccccctgcagcacggacgtgtgc
gacagcgactacggcccccggcggctcccgggcagcagcatgggccccggcagcgcctcg
ggggggcccagccgctggaaggtgtcggtgggccacggcggccaccactccaagcacaac
aagtactacatggacctgaactcggactcggacccctaccctccgccgcccacgccgctc
tcccagtacctgtcggccgaggagagctgcccgccctcgccgtccaccgagcgctcctac
ttccacctctgtccgccgccgccgtccccctgcaccgactcctcctga
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integrated database retrieval system
