Gadus morhua (Atlantic cod): 115551066
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Entry
115551066 CDS
T10832
Symbol
fbxl13
Name
(RefSeq) dynein regulatory complex subunit 6
KO
K10279
dynein regulatory complex subunit 6
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115551066 (fbxl13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115551066 (fbxl13)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115551066 (fbxl13)
Cilium and associated proteins [BR:
gmh03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
115551066 (fbxl13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_EndoS
F-box-like
LRR_Zer-1
LRR_At1g61320_AtMIF1
F-box
LRR_8
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
115551066
NCBI-ProteinID:
XP_030222446
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Position
9:13891858..13907522
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AA seq
803 aa
AA seq
DB search
MDPLQNAKVKQYVLKHSLPQIYQALLTASCLSSPNDPIQFLENKLVALQGHHNLHDIDWY
TFAHDAENQIAKTSLTRGRVRSIFKEAEDSLPTYLLEKVYSCYRRHLTKYCFRQWVKYIT
QRKRKAYELHQKMRSAGEHYGRKRQGLALTSWISWLGFRKSVQAAVFEKLQKVFNGIRFK
RIITIWSFAVKESKRTKEYLETLDKGVLEMSDQAGEGCDSVSVLPGKLSNKIFQYLELRD
LLKCELVCSTWRAITQSGHLWSRVNFSVEKDWITDLTVKEILQKYRPFVTNLNLRGCTSL
TWLSLTCINKCRNLQDVNVSECSNITDMMVQSLVEACPNLLYLNLSCTPVTNEVLRALSR
SSLSLQYLSLAYCQHFTDKGLKYLTTGKGCHDLVHLNLSGCTQMTVDGFRYISTGCPSLK
EIVINDMATLSDRCVVGLIAQCSSLCALSLLDTPHLSDAAFKAIAEVSKLKAFSTEGNGR
ITDSSWKALCHSSPGLRRLHAAECPRMTDACLKSVATLKNLNYLDISHCNKVSDVGVRFL
TEGSAAAKLRELNLSHCSRIRDISVMRIAQKMLKLFHLNLSHCSSLTNSSLECLTGSRLC
SLDLSGCSLQDQGLGALEGVCLRRLVLSQCVHITDVGVEKLLKRLRDLGHLDVSHCVGLS
DNAIKALSFYCRALVSLRMAGCPKMTDVALQYLTAGLRYLRELDVSGCVRLSDRSVRLLE
RICPPLGSVTLAYCCGISKTAALRLKPRVKCWVNSVDDPPLWFGYNNMGQMLEPIKSPSQ
SDVTGRQGEPAEETVDEESSKLT
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggatcccttacaaaacgcgaaagttaaacaatacgtgctaaaacactctctgccgcaa
atttatcaggccctgttgacagcttcatgtttgtcaagcccaaatgatccaatacagttt
ctggaaaataaacttgttgcccttcaaggacatcataatctccacgacattgactggtac
acatttgctcatgatgcagaaaaccaaatagcaaaaacctcattgacacgtggcagggtg
cgttccatcttcaaggaggccgaagactcgctgcccacatatctgttagagaaagtctac
tcctgttaccgaagacatctaacaaagtattgcttcagacaatgggtgaagtacatcaca
caaaggaagaggaaggcctacgagcttcaccagaagatgaggtcggctggagagcactac
gggaggaaacggcagggcctagcactcacaagttggatcagctggttaggattcagaaag
agcgtccaagcagcggtctttgagaagcttcagaaagtgttcaatggcatccgctttaaa
cgcataataaccatatggagctttgctgtgaaggaatcaaagaggaccaaggaatacttg
gagacactggataagggtgtgctggagatgagcgaccaggctggagagggatgtgacagt
gtctccgttctccccgggaagctctccaataagatcttccagtatttagagttgcgagac
ctgctgaaatgtgagctagtgtgcagtacgtggagagccatcacacagtcggggcatctg
tggagtcgggtaaacttctctgtagaaaaagactggatcactgacctgacggtcaaggag
attctacagaagtaccggccctttgtcaccaacctcaacctacgcggctgcacgtccctt
acctggcttagcttgacatgcatcaataaatgcagaaacctccaggacgtcaacgtgtca
gagtgctccaatataactgatatgatggtgcagagcctggtggaggcgtgtcccaacctc
ctctacctcaacctctcctgcacaccggtgacgaatgaggtcctgcgggcactctcaaga
agcagtctgagcctccagtacctcagtctggcctattgccagcacttcacagataaaggc
ttaaagtatcttaccacagggaagggctgccacgacctggtccacctcaacctgtctggc
tgcacacagatgacagtggatggattcagatacatctcaacaggatgcccatcactcaaa
gagattgtgatcaatgatatggccacgctgtctgatagatgtgttgtgggtctgatcgcg
cagtgttcttctctctgcgccctctccctcttggacacgcctcatctgtctgacgccgcc
ttcaaggccattgcagaagtctccaaactcaaggctttcagcacggagggaaacggccgc
atcacggacagcagctggaaggccctgtgtcacagctctcccggtctgcgcaggctgcat
gcagccgagtgccccaggatgacagacgcatgcctgaagtctgtagccaccctgaagaac
ctgaactacctagacatctcacattgcaacaaggtgagcgatgtcggtgtgcggtttctg
acagagggctctgctgcagccaaactgagagagctgaacctaagtcactgcagtagaatc
cgggacatctccgtcatgaggatcgcccagaagatgttgaaactgttccacctcaacctg
agtcactgcagcagtctgactaacagcagcttggagtgtctgaccggtagcaggctctgc
tccctggacctcagtggctgcagcctccaggaccaggggctgggggctctggaaggcgtc
tgtctaaggaggctggtgctctcgcagtgtgtccacatcacagacgttggcgttgagaag
ctgttgaagcgtctgagagacctgggccacctggacgtctctcactgcgtgggtctgtcc
gacaacgccatcaaggccctctccttctactgcagagcactggtcagcctgcgcatggct
ggctgccccaagatgaccgacgtggcgctgcagtacctgacggctggcctgcgttacctg
cgggagctggacgtcagcggctgtgtgcggctgagcgaccggagtgtccgtctgctggag
cgcatctgcccaccgctgggcagcgtcaccctggcttactgctgtggcatctccaagacg
gcggccctgaggctgaagccacgtgtgaagtgctgggtaaacagcgtcgatgacccgccc
ctctggttcggttacaacaacatgggccagatgctggagccaatcaaaagccccagccag
agtgatgtcactggcaggcagggggaaccagcggaggagacggtggatgaagagagcagc
aaactgacctga
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