Gadus morhua (Atlantic cod): 115551081
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Entry
115551081 CDS
T10832
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115551081 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115551081 (exosc6)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115551081 (exosc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115551081
NCBI-ProteinID:
XP_030222463
Ensembl:
ENSGMOG00000008151
UniProt:
A0A8C4Z752
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All DBs
Position
9:17608689..17610019
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AA seq
274 aa
AA seq
DB search
MPTDTKRVRGPEVSQSLSRFICKPETTLPSDGTRADGRNRDQVDVRPVFVRCGLVSQAKG
SAYIEAGNTKLICCVYGPKETERKDETDMKCGRLFADMRFAPFSCPERGSWIQGSQEKDL
SLMVLESLQPAVCLHKYPRSQIDVNVMVLENNGSALAHAITCASLALADAGIEMYDLVLG
CSIRQDGASYLIDPTFLEESGSNWASGENQGSLTVSFLPSLNQISGLQSDGEMGEETLTA
GVRTCIEGCYKLYPVIQQALVKAVRGAAPPPSES
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgacacaaaaagagtacgaggccctgaagtgtcacaaagtttgtctaggttt
atctgcaaaccagaaacaactttgccctcggatggcacaagagcagatggtagaaatcgt
gatcaagtggatgtccgaccggtttttgtccgttgtggacttgtaagccaggcaaagggc
tcagcatacatcgaggctggaaacacgaagctgatttgttgtgtttacggcccaaaggaa
acggagcgaaaggatgagacggacatgaaatgcgggaggttgttcgccgacatgcgattt
gccccattctcctgcccagaaaggggctcctggatacagggtagtcaggagaaggacctg
tccctgatggtactggagagtctgcagccagcggtgtgcctccataagtacccccgttca
cagattgacgtcaatgtaatggtcctcgagaacaacggttcagccttggcccatgccatc
acatgtgcatccctggccctggccgacgcagggattgagatgtatgacctggtgctcggc
tgctctattcgacaagatggtgcctcatatctgattgaccctacattcctggaagagagc
ggaagcaactgggcaagtggggagaaccagggaagcctgacggtgtcttttctccccagc
ttgaatcagatttctggcctccagtccgatggagagatgggtgaggagactctaacagca
ggagtgcgtacatgcattgagggatgctataaactctaccctgtgatccagcaggcgctg
gtcaaggctgtgcgtggggcagccccacccccttcagagagctga
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