KEGG   Gadus morhua (Atlantic cod): 115551111
Entry
115551111         CDS       T10832                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
  KO
K06245  laminin, beta 4
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04510  Focal adhesion
gmh04512  ECM-receptor interaction
gmh04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115551111 (lamb4)
   04518 Integrin signaling
    115551111 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115551111 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMININ_IV_B LAMB1 LAMB4 DUF7441
Other DBs
NCBI-GeneID: 115551111
NCBI-ProteinID: XP_030222512
Ensembl: ENSGMOG00000000586
LinkDB
Position
9:complement(16272734..16297055)
AA seq 1788 aa
MICGLLFLLAVPGALLQEECHGSSCNPQLGDLMVGRAAQLSASSTCGLDGPQNYCIIGYL
EEEQKCFTCDSRQPYDRHSNPDSHLIENAITIFDPERRMRWWQSEPGVNQVSIQLNLETL
FQFSHLVLTFKSFRPAAMLVERSKDFGHTWKVFRYYAEDCAAHFPWVSAEPSDSVDDVVC
DSRYSGSQPSTDGEVVLKALDPIFDIEDPYAPNIQELITLTNIRVNFTRLFTLGDTLLGR
RRRNPQDKYYYALYDMVVRGSCFCNGHASRCRPVDAGRGDVFNEPGMVHGRCVCQHNTAG
DNCERCEDLYNDAPWRPGSDHEPHTCRRCNCHGHSEQCRFDPARYEATGRLSGGVCVDCR
NERVGPRCEQCRPYQYQDPFKALEDPRGCIPCDCDPVGSQGGGLCESATGQCVCKENVEG
QRCDRCKYGFYGLREDDPAGCQMCLCNSQGTMPSAHQCDQVTGECMCEPLATGRYCDECL
PGYWGLGNTVHRCAPCDCDSGGAVGSSCSAEDGKCECLPNMAGRRCNDPAHGYFLPPLDY
FLYEAEFAGPLQGISSSSLVNPSALPKCEKYFREQGYDFKYSNGRLVLVRKTKRQARRRR
QGEQRTISLEPGSPLQIVPRQRTADRQVTWTGPGFVRVRDGAGLRFTVDNLPSSLDYQLV
VRYESESPDDWLASISVVPLSPGDGVCPSDPTESKTLRLPGNSRSAIVDQPVCLNAGGRY
FVDITFRKEQTSNPQFSSHILIDSMGLIPRIESVQDLCSRSDLDSYRRFRCIHLAAEAGQ
QEQWPEVCEELVKSLSARINGAVACRCNIHGSVGQSCSKVGGLCECKPNVIGRCCETCAP
LTFGFGPGGCEPCACDPRGALSELCDQVRGQCPCRAEVAGRSCDRCRPGYWGFPLCRPCE
CNGLAELCDQDTGSCLQCRENSAGHSCERCVEGYHGDPVSRKPCEPCSCPDILGSGKFFA
SFCNREPESGSLICNCLQGHTGPRCDSCSAGFYGDLAAPGALCEQCLCNNNIDPEDSAAC
DRVTGECLRCLHHTQGAHCQECRPGYYGDALEHSCKECSCDRRGTEVTKCPLGSPCFCQP
QSGQCPCRPGATGALCDECADGFWNIGGASGCQPCNCDPANSLDNVCDKVTGQCVCRPEF
GGRQCDECGENHFGNPDLQCLSCDCDLGGSERPACDPDTGECLCRVGVTGIFCDECAPGF
QQTFPACAPCHACNEIWRLNISEVQKASQKMKVLIPRQGNQSGHERQNQRMTKMESSLDR
LANLTGGSPALLGDVERLWLNVRQLKDSIDPNLILVDTTPLLNTEIDNIRKDFNNLLQRL
RDQNPDDPDVDTEEVEELLDEIRKLHKDFMAEEKKVQDADTAVEDSMNTRQALKGLGANC
GTNGNLSQLVDKVNALDVVTLNEKICGAPGHRECAKSKCGGALCSTFWGTKLCGGPSCNG
SLPLGLDAKKEAAEAETAIGTLKDELEASRRKTNATKKVALETLDLSDKLQDRINNKKED
VEREKQKAKDLLRLVQVYLRDEMVSPDDIEKMAQAVLNIQLPGTPDQIRSLIKDIKDLVS
NTPDLKKDLSWLEEQTKIAQDLLQQALQLKNKSKNIDVTHITEALYAAERAQDTANNDLE
DATNATDMIKDQITNVQQKLDDAEGALMSGRPPGELLGEIGALKNKTDLNREQALEAGRA
ADHALSTAGEAEAELDKVNKKFKELKEKNGKQNATDMASQLLKDITMEAEKLKEDVKRKL
KQIEDLESRIQDSISSKNQKAKEVEDLLDAAEELRHNLTQKAMGYIDC
NT seq 5367 nt   +upstreamnt  +downstreamnt
atgatctgtggcctgctgttcttgttggcggtccctggtgcactgctccaggaggagtgc
cacgggagctcctgtaacccccagctcggtgacctgatggtgggtcgggctgctcagcta
tcagcctcctccacctgcggcctggacgggccccagaactactgcatcatcggatacctg
gaggaggaacagaagtgcttcacctgtgactccaggcagccctacgaccgccacagtaac
cccgacagccacctcatcgagaacgccatcaccatcttcgaccccgaacgcaggatgcgc
tggtggcagtctgagcccggtgtaaatcaagtcagcattcagctaaacctagagaccctg
ttccagttcagccacctggtgctcaccttcaagagtttccgcccggcggccatgctggtg
gagcgctccaaggacttcggccacacgtggaaggtgttccgctactacgcagaggactgt
gccgcccacttcccctgggtctcagccgagccgtccgacagcgtggacgacgtggtctgt
gacagcagatactcgggctcacagccgtccaccgacggagaggtggttttaaaagctctg
gatcctatatttgatattgaagacccgtacgcacccaacattcaagagctgatcaccttg
acgaacatccgggttaacttcacccgtctgttcacgctgggcgacaccctgctgggccgc
cggcggaggaacccccaggacaagtactactacgccctgtacgacatggtggtgcggggc
agctgcttctgcaacggccacgccagcaggtgcaggcccgtcgacgccggccggggagac
gtcttcaacgagcccggcatggtacacggacggtgtgtgtgccaacacaacacggcaggg
gacaactgcgagaggtgcgaagacctttacaacgacgccccctggcggccaggcagcgac
cacgaaccccacacctgcaggagatgcaactgccacggccactcggagcagtgccgcttc
gacccggcccgctacgaggccacggggcggctgagcggaggcgtgtgcgtggactgtcgg
aatgagcgcgtgggcccgcggtgtgagcagtgccggccctaccagtaccaggaccccttc
aaagccctggaggacccgcggggctgcatcccctgcgactgtgacccagtggggtcccag
ggtgggggcctgtgtgagtctgccacaggacaatgtgtctgcaaggagaacgttgagggc
cagcgctgcgaccgctgcaagtatggcttctacggcctgcgagaggacgaccccgccggc
tgccagatgtgcctgtgtaactcacagggcaccatgccctcggcccaccagtgcgaccag
gtgactggagagtgtatgtgtgaacccctggctactggacgatactgtgatgaatgtctg
ccagggtactggggtctggggaacactgttcaccgctgtgccccctgtgactgtgactct
ggaggagcagtaggcagcagctgctctgctgaagatgggaaatgtgagtgtttgcccaac
atggcggggaggaggtgcaatgatcccgcccatggatacttcctgcccccgctagactac
ttcctctatgaggccgagttcgctgggccgttacaaggcataagttcctcttctttggtc
aacccctcggctctgcctaagtgtgagaagtacttccgggagcagggctacgacttcaag
tacagcaacggccgcctggtcctggtgcggaagaccaagaggcaggcccgcaggaggaga
cagggagagcagaggaccatctctttagaaccggggagccccctgcagattgtcccccgc
cagaggacagcagacaggcaggtcacctggacgggcccgggattcgtcagggtccgggat
ggggcggggctgaggttcaccgtcgacaacctgcccagctccctcgactaccagctggtg
gtccgctacgagtcagagtccccagacgattggctggcctcgataagcgttgttcccttg
tctcccggtgacggcgtctgccccagtgacccaacagaaagtaaaactctccgacttcct
gggaactccaggagcgccattgtggatcagcccgtgtgcctgaatgcaggggggcgatac
tttgtggacatcaccttcaggaaagagcagacctcaaatccccaattcagctcacacatc
cttattgactctatgggtttaattccccgaatcgagtctgtccaggacttgtgttctcgg
agcgatctggattcgtaccggcgctttcgctgtatccacctggcggcggaggcgggccag
caggagcagtggccggaggtgtgtgaggagctggtcaagagcctgtcggcccgcatcaac
ggagctgtggcctgcaggtgcaacatccacgggtcggtgggccagtcctgcagtaaggtg
gggggtctgtgtgaatgcaagcccaacgtgattggtcgatgctgtgagacctgcgccccc
cttacctttggattcggaccaggcggttgtgaaccgtgtgcgtgcgacccgcgcggcgcc
ttgtcggagctgtgcgaccaggtgagaggccagtgcccgtgccgggcggaggtggcgggc
cggagctgcgaccgctgccggccggggtactggggcttcccgctgtgccggccctgcgag
tgcaacggcctggcggagctctgcgaccaggacaccggctcctgtctgcagtgccgggag
aactctgccggacactcctgtgagaggtgtgtggaaggttaccacggtgacccagtctcc
agaaagccctgtgagccctgctcttgtccagacattcttggcagcgggaaattcttcgca
tcattctgcaaccgagagccagagtccggcagtcttatctgcaactgtctacagggacac
acaggtcctcgctgtgacagctgttcggccggtttctatggcgacctggcggcccccggg
gccctgtgcgagcagtgtctgtgcaacaacaacatcgacccagaggacagcgccgcgtgc
gacagggtgaccggcgagtgcctccgctgcctgcatcacacgcagggagcgcactgccag
gagtgcaggcccgggtactacggcgacgccctggagcacagctgcaaagagtgctcgtgt
gaccggagggggacggaggtgaccaagtgccccctgggaagcccctgcttctgccagcca
cagagcggccagtgcccgtgccgcccgggcgccaccggggcgctgtgcgacgagtgtgcc
gacggcttctggaacatcgggggggcctcagggtgccagccgtgcaactgtgacccggcc
aactccctggacaacgtctgcgacaaggtgacaggacagtgtgtgtgccgtccagagttc
ggaggaaggcagtgcgatgaatgtggcgaaaaccactttgggaatccagacctccagtgt
ctatcgtgtgactgtgacctggggggctcggagcggcccgcctgcgacccggacaccggc
gagtgcctgtgccgcgtcggggtgacgggcatcttctgcgacgagtgcgccccgggcttc
cagcagaccttccccgcctgcgccccctgccacgcgtgcaacgagatctggcggctcaac
atcagcgaggtccagaaggcctcgcagaagatgaaagtgctcatccctcgccaaggcaac
cagtccggccacgagcggcagaaccagcggatgaccaagatggagtccagcttggaccgg
ctagccaacctgacgggggggtcccccgctttgttgggggacgtggagaggctttggctc
aatgtccggcagctcaaagacagcatcgatcccaatttaatcttggtcgacacgacaccg
ctgctcaacacggagatagacaacatccggaaagatttcaataacctgctgcagcgcctg
agagaccagaaccctgacgaccctgatgtggacacggaggaagtagaagagctcctggat
gagattaggaagctccacaaggacttcatggcagaggagaagaaggtgcaggacgccgac
acggccgtggaggactccatgaacacacggcaggccctgaagggcctcggggccaactgt
ggcaccaatgggaacctgtcccagctggtggacaaggtcaacgcactggacgtggtcacg
ctcaatgagaagatctgcggagcaccaggtcaccgggaatgtgccaagtctaagtgcggc
ggggcgctctgcagcaccttctggggaaccaagctctgtggcggtccgtcctgcaacggc
agccttccactgggtctggacgcaaagaaggaggcggcggaggcggagaccgccatcggc
acgctgaaggatgaactggaggccagcaggagaaagaccaacgcaactaagaaggtggcc
ctagaaacgctggacctctcggataagctgcaggaccgcatcaacaacaagaaggaagac
gtggagagagagaaacagaaagccaaggatctgttgagactggtccaggtctacctgagg
gatgagatggtgtcccccgacgacatcgagaagatggcccaggccgtgttgaacatacag
ctgcctggtacccccgaccagatccgctccctgatcaaagacatcaaagatctagtctca
aacacccccgacctgaagaaggacctgagctggctggaagagcagaccaagatagcccag
gacctgctccaacaagctctccaactcaaaaataaaagtaaaaacatagatgtgacgcac
atcaccgaggcgctctacgcggcagaacgggcccaggacacggccaacaacgacctggag
gacgccaccaacgccacagacatgatcaaggaccagatcactaatgtgcagcagaagctg
gacgatgccgagggggctctgatgagcggtcggccccccggggagctgctgggggagata
ggggccctgaagaacaagaccgacctgaaccgagagcaggcgctggaggctgggagggca
gcggaccacgcgctgtccactgctggagaggctgaggctgagctggacaaggtgaacaag
aagtttaaagagctaaaagagaagaatggcaagcagaacgcaacagacatggccagccag
cttctgaaggacatcaccatggaggcagagaagctcaaggaggacgtaaaacgcaaactg
aagcaaatcgaagacctggagagcaggatccaggactccatcagcagcaaaaaccaaaag
gccaaagaggtggaagatctgctggacgcagcggaggagttgaggcataacctcacccaa
aaagccatgggatacatcgactgctag

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