Gadus morhua (Atlantic cod): 115551210
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Entry
115551210 CDS
T10832
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03030
DNA replication
gmh03410
Base excision repair
gmh03420
Nucleotide excision repair
gmh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115551210 (rfc2)
03410 Base excision repair
115551210 (rfc2)
03420 Nucleotide excision repair
115551210 (rfc2)
03430 Mismatch repair
115551210 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmh03032
]
115551210 (rfc2)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115551210 (rfc2)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115551210 (rfc2)
DNA replication proteins [BR:
gmh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115551210 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
115551210 (rfc2)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115551210 (rfc2)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115551210 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
115551210 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
AAA_24
AAA_11
Rad17
RCF1-5-like_lid
MipZ
RuvB_N
AAA_19
DEAD
nSTAND3
AAA_5
AAA_30
AAA_18
RNA_helicase
ABC_tran
AAA_25
MeaB
AAA_28
SLFN-g3_helicase
NTPase_1
AAA_assoc_2
AAA_2
AAA_23
MCM
DNAX_ATPase_lid
T2SSE
DUF815
bpMoxR
FtsK_SpoIIIE
ATPase_2
Motif
Other DBs
NCBI-GeneID:
115551210
NCBI-ProteinID:
XP_030222670
Ensembl:
ENSGMOG00000011916
LinkDB
All DBs
Position
1:22163806..22167004
Genome browser
AA seq
356 aa
AA seq
DB search
MANMDVEMKNPTEPEPEPEPAPMKEEPAKSSSSGGSYDLPWVEKYRPLKLNQIVGNEETV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNERGIDVVR
NKIKMFAQQKVTLPKGRHKVIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYSKLTDGQVLARLQQVVELEELSVCPDGLEAVIFTAQGDMRQALNNLQ
STHSGFGYIDSTNVFKVCDEPHPLLVKGMLGRCVEGDVDGAYKVVEELWALGYSPEDIMG
NIFRVCKTYQMAEYLKLEFIKEIGYTHMRIVEGVNSLLQMAGLLARLCSKTSPPAS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatggatgtggagatgaagaacccgacagaaccagaaccagaaccagagccc
gctcccatgaaagaggagccggcgaagagctccagcagcggcggctcctacgacctgccc
tgggtggagaagtaccggccgctgaagctcaaccagatagtcggtaacgaggagacagtc
agccggctggaggtgttcgccagggagggaaacgtccccaacatcatcatcgcagggcct
ccggggaccgggaagaccaccagcatcctctgcctggccagagccctgctcggcgcgtcc
atgaaggacgcggtgctggagctcaacgcttctaatgagaggggtatcgacgtggtacgg
aacaagatcaagatgttcgcccagcagaaggtcacacttcccaaaggacgacacaaggtc
atcatcctggacgaggctgacagcatgacggacggggcacagcaggctctgagaaggatc
atggagatctactccaagacgacgcgcttcgccctggcctgcaacgcctccgacaagatc
atcgagcccatccagtcgcgctgcgccgtgctgcgctacagcaagctgacagacggccag
gtgctggcccgcctgcagcaggtggtggagctggaggagctctccgtctgccccgacggc
ctggaggccgtcatcttcaccgcccagggagacatgagacaggcactcaacaacctgcag
tcgacccactcgggcttcggctacatcgacagcaccaacgtgttcaaggtgtgtgacgag
ccccaccccctgctggtgaagggcatgctgggtcgctgcgtggagggggacgtggacggg
gcctacaaggtggtggaggagttgtgggcgctgggctactcccccgaggacatcatgggc
aacatcttcagggtctgcaagacctaccagatggccgagtacctgaagctggagttcatc
aaggagatcggctacacccacatgaggattgtggagggggtcaactcactgctgcagatg
gccggactcctggctcgcctgtgcagcaagaccagtcctccagcctcctag
DBGET
integrated database retrieval system