KEGG   Gadus morhua (Atlantic cod): 115551229
Entry
115551229         CDS       T10832                                 
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04260  Cardiac muscle contraction
gmh04261  Adrenergic signaling in cardiomyocytes
gmh04814  Motor proteins
gmh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    115551229 (tpm1)
   04820 Cytoskeleton in muscle cells
    115551229 (tpm1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    115551229 (tpm1)
   04261 Adrenergic signaling in cardiomyocytes
    115551229 (tpm1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gmh04812]
    115551229 (tpm1)
   04147 Exosome [BR:gmh04147]
    115551229 (tpm1)
Cytoskeleton proteins [BR:gmh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     115551229 (tpm1)
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   115551229 (tpm1)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ CCDC39 TMF_DNA_bd Sec2p DUF745 Rod_CreS FKBP15 Lebercilin ATG16 DUF3450 CENP-F_leu_zip HAUS1 PUMA_CC Laminin_I CC_Bre1 DUF1664 DUF16 SlyX TMP_N Fez1
Other DBs
NCBI-GeneID: 115551229
NCBI-ProteinID: XP_030222698
Ensembl: ENSGMOG00000006834
LinkDB
Position
9:complement(21059245..21070502)
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAEGDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgctcaagctggacaaggagaatgccttggac
agagcggagcaggctgagggagacaagaaggcagcggaggacagaagcaaacagcttgag
gacgatttggtagctctgcagaagaagctcaagggaactgaggatgagcttgacaagtac
tccgaggctcttaaagacgcacaggagaaacttgagttggctgagaagaaagccgccgac
gctgagagcgatgtcgcttcccttaacagacgcatccagctggttgaggaggagttggat
cgtgcccaggagcgtctggccactgccctgaccaagctggaggaggctgagaaggcagct
gatgagagcgagagaggcatgaaggttattgagaacagagccatgaaggacgaggagaag
atggagctgcaggagatccagctgaaggaagccaaacacatcgctgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgacctggagcgcacagag
gagcgcgctgagctctcagaaggcaaatgctctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggccgagaagtactcccagaaggaggacaag
tacgaggaggagatcaaggtcctcaccgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgatgacctggaagacgagctg
tacgcccagaaactgaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacctccatataa

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