Gadus morhua (Atlantic cod): 115551288
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Entry
115551288 CDS
T10832
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115551288 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115551288 (nup93)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115551288 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
TarH
Motif
Other DBs
NCBI-GeneID:
115551288
NCBI-ProteinID:
XP_030222821
Ensembl:
ENSGMOG00000000021
LinkDB
All DBs
Position
9:complement(17037028..17058295)
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AA seq
820 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATSFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQQVLRTLLGAGEDALDFSQDVEPSFVSEVGVPGRSALDS
VEVAYGRQIYIFNEKIVNGHIQPNLGDLCASVVESIDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTAVDMQMAFVRQALSFLENCYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGHPVWAVIYYCLRCGDLNAAMQVVNRAQHQLGDFKAWFQEYMNSP
DRRLSPASENKLRLHYRRVLRNSADPYKRAVYCLIGKCDVSDNHGEVADKTEDYLWLKLN
QVCFDDDGSNSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHSVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMVRRINFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTKAIISKVALEAENKGLFEEAVKLYELAKNPDKVLGLMNRLLSPVIAQVSAPQSN
KERLKNTALAIAERYRSQGTAGEKSVHSTFYLLLDLMTFFDEYHAGHIDRAYDVMEHLKL
LPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGASTGTPGRPQRSME
DRDMQMRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgagggttttggagagctgctacagcaggcagagcagttagccgccgagaca
gaagcggtgtcggagcttcctcatgtggagaggaacctgcaggagattcagcaggctggg
gagaggctcaggtcccgcacgttgacccgcacctctcaggatgctgcagatgtcaaagcg
tccatcctcctgggctccagaggactagacatcttccacatctctcagaggttggagagt
ctgagtgctgccactagctttgagcccttggagccggtcaaagacactgacatacagggc
ttcctgaaaaacgagagggacaacgccctcctctcagccatcgaggagtcccgacgcagg
acctttctgctggcggaggagtaccaccgggagtccatgctggtccagtgggagcaggtg
aagcagcaggtgctgcgcaccctgctgggggccggagaggacgccctggacttcagtcag
gatgtggagcctagttttgtgagtgaagtcggggtcccaggaaggagtgccttggacagt
gtggaagtggcctatggacgacagatctacatcttcaacgagaagatcgtcaacggccac
atccagcccaacctgggggacctgtgtgcctctgtggtggagagcatcgacgacaagaac
gtgtcagacatgtggctgatggtgaagcagatgactgacgtgctgctggtgccggctaaa
gacaccctgaagagccgcacggcggtggacatgcagatggcctttgtgcgccaggctctc
agcttcctggagaactgctacaagaactacaccatggtgacggtgtttgggaacctccac
caggcccagctgggcggggtgcctggaacgtaccaactggtccgcagcttcctcaacatt
aaactgcccggcccactgcccggcatgcaggacggggaggtggagggtcacccggtgtgg
gcggtcatctactactgcctgcgctgtggggacctgaatgcagccatgcaggtggtgaac
agggcccagcaccagctgggggacttcaaggcctggttccaggagtacatgaacagccct
gacagacggctctccccggcatcggagaacaagctgcgtctccactaccgccgggtcctg
cggaacagcgccgacccttacaagagggccgtctactgcctgatcggaaagtgcgacgtc
agcgacaaccacggggaggtggcggacaagacggaggactacctctggctgaagctgaac
caggtgtgtttcgacgacgacggcagcaactcaccgcaggaccgactgaccctgccccag
ctgcagaaacagctgctggaggactacggggagtcccacttctcggccagccagcagccc
ttcctctacttccaggtgctgttcctgacggcccagttcgaggcggccgtggccttcctg
ttccgcgtggagcgcctgcgcagccacagcgtgcacgtggcgctggtgctgtacgagctg
cggctgctgctcaagtcgtcaggccagagcgcccaactcttgagccaggagcccggggac
cctcccatggtgcgccggatcaacttcatccgcctgctcatgctctacacccgcaagttt
gagtccacagacccacgggaggccctgcagtatttctacttcctccgcaatgagaaggac
agccagggagagaacatgttcatgcgctgcgtcagtgagctggtgattgagagccgtgag
ttcgacatgctgctgggaagactggagaaggatggcagcagaaagcccggcgtgatagac
aagtttgccggagacaccaaagccatcatcagcaaggtggcgttggaagcagagaacaag
ggcctgtttgaggaggcagtcaaactctacgagttggccaagaacccagataaggtgctg
gggctgatgaaccggttgctcagtccagtgattgctcaggtcagcgctccccagtccaac
aaggagaggctaaagaacacagccctggccatcgcggagaggtaccgctcacagggcacg
gccggggagaagtctgtgcacagcaccttctacctgctgctggacctcatgaccttcttc
gatgagtaccacgccggccacatcgaccgggcctacgacgtgatggagcatctgaagctc
ctcccactcagtcaagacagcgtggaggagagagtcgccgccttcaggaacttcagtgac
gaggtccgtcacaacctgtccgaggtgctgctggccaccatgaacatcctgttcacgcag
tacaagcgcctgaagggggcgtcgacggggaccccaggccgaccccagaggagcatggag
gacagggacatgcaaatgcgcagccaggccagagccctgatcaccttcgctgggatgatc
ccgtacagaatggccggagacaccaatgccagattggtgcagatggaagtgttgatgaac
tga
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