Gadus morhua (Atlantic cod): 115551392
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Entry
115551392 CDS
T10832
Symbol
ush1c
Name
(RefSeq) harmonin
KO
K21877
harmonin
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115551392 (ush1c)
Cilium and associated proteins [BR:
gmh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115551392 (ush1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USH1C_N
PDZ
PDZ_6
PDZ_2
DUF8208
Baculo_LEF5_C
DUF3567
Hepatitis_core
Motif
Other DBs
NCBI-GeneID:
115551392
NCBI-ProteinID:
XP_030222962
Ensembl:
ENSGMOG00000004877
LinkDB
All DBs
Position
9:1994454..2020028
Genome browser
AA seq
555 aa
AA seq
DB search
MERKVAREFRHKVELLIENEAEKDYLYDVLRMYHQSMDLPVLVGDLKLVINEPKRLPLFD
SIRPLIPLKHQVEYDMLTPKKSRKLKEVRLNRTHPDGLGLSVRGGLEFGSGLFISQIVKD
GQAGNVGLQIGDEIVRINGYSISSCIHEEVINLIKTKKTVSLKVRHVGMIPLKGSSAEPL
KWQFVDQFVSESGEKKTSVAGLASMGGREIKEKKVFFNLVGTIGMGISISSGPTQKPGIY
ISNVKAGSVSAEVGLEMGDQIVEVNSVDFTNLDHKEAVKVLKSSRSLTITVLTGAGRELF
MSDEERLAAEARRELDRQELMQQKRVAMETNKIVKEQQEKERQRKMEIAQKAAEEEERYQ
KEMDKIEAAEKKHTQDWEEDWGAKERSQSPKKGRKSPSPDRKGSPSPKAKSSPDGEDEDE
EEEEKEEEEEEGFQKYEDEFDPYSMFSSEQIDGRDVRLLRIKKVGNLDIALEGGVDSPLG
KLAVSAVYEGGSADKHGGIVPGDEVMAVNGKILIDATLTEGQNSLARAWNSGGDWIDLVI
TVSPPKDYEDEVTFF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtaaagttgcccgagaatttagacacaaggtagagctgctgatcgagaatgaa
gcagagaaggactacctttacgatgtcctccgtatgtatcaccagtcgatggatctgccc
gtgctggtgggggacctgaagctggtgatcaatgagccaaagcggctgcctttgttcgac
tccatccggcccctcatccccctcaaacaccaggtcgagtacgacatgctgacgcccaag
aagtcccggaagctgaaggaggtgcgtctgaaccggacccatcccgacggcctgggactg
agcgtcagaggaggcctggagttcgggagcggactcttcatatcccagatcgtcaaggac
ggccaggccgggaatgtgggtcttcagatcggggatgagatcgttcgcatcaacgggtac
tccatctcctcctgtatccacgaggaggtcatcaacctgattaagaccaagaagaccgtg
tcgctcaaagtcagacatgtgggcatgatcccgctaaaggggtcgtcagctgagcccctt
aaatggcagtttgtggaccagtttgtgtctgagtcaggggagaagaagaccagtgtggct
ggcctggcctctatgggcgggcgggagatcaaggagaagaaggtgttcttcaacctggtg
gggaccatcgggatgggcatcagcatctccagtgggcccacccagaagcccggcatctac
atcagcaacgtcaaggccggctccgtctccgccgaagtgggactagagatgggggaccag
attgtggaggtgaacagtgtggatttcacaaatctggaccacaaagaggctgtgaaggtc
ttgaagagcagcaggagtctgaccatcactgtgctgacaggggcggggcgggagctgttc
atgtcggacgaggagcggctggcggcggaggcgcgccgggagctcgaccgccaggagctc
atgcagcagaagagggttgccatggagaccaacaagatcgtcaaagagcagcaggagaag
gaacgacagaggaagatggagattgctcagaaggctgcagaggaagaggagcgctatcag
aaggagatggataagattgaggcagcagagaagaagcacacccaggactgggaggaggac
tggggggccaaggagaggtcccagagcccgaagaagggccggaagagcccctcccccgac
aggaagggctctccctcccccaaggctaagagctcacccgatggagaagatgaagatgaa
gaggaggaggagaaggaggaggaggaggaagaaggttttcagaaatacgaagatgagttt
gatccatactcgatgttctcttcagagcagatcgatggtcgagacgtcagactgctcagg
atcaaaaaggtggggaacctggacatagcgctggagggtggggtggactcccctctgggg
aagctggcggtgtcagccgtgtacgaggggggctctgcggacaaacacggtggcatcgtt
ccaggtgacgaggttatggcggtgaacgggaagatcctgatcgacgcaacgctaacggag
ggtcagaactccctggccagagcctggaacagtggcggggattggattgacctggtgatc
acagtctcccctccaaaagattatgaagatgaagtaacattcttctaa
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