Gadus morhua (Atlantic cod): 115551912
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Entry
115551912 CDS
T10832
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04210
Apoptosis
gmh04218
Cellular senescence
gmh04519
Cadherin signaling
gmh04620
Toll-like receptor signaling pathway
gmh04621
NOD-like receptor signaling pathway
gmh04622
RIG-I-like receptor signaling pathway
gmh04623
Cytosolic DNA-sensing pathway
gmh04625
C-type lectin receptor signaling pathway
gmh04920
Adipocytokine signaling pathway
gmh05132
Salmonella infection
gmh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115551912
09133 Signaling molecules and interaction
04519 Cadherin signaling
115551912
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115551912
04218 Cellular senescence
115551912
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115551912
04621 NOD-like receptor signaling pathway
115551912
04622 RIG-I-like receptor signaling pathway
115551912
04623 Cytosolic DNA-sensing pathway
115551912
04625 C-type lectin receptor signaling pathway
115551912
09152 Endocrine system
04920 Adipocytokine signaling pathway
115551912
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115551912
09171 Infectious disease: bacterial
05132 Salmonella infection
115551912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115551912
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
115551912
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
115551912
NCBI-ProteinID:
XP_030223381
Ensembl:
ENSGMOG00000007506
LinkDB
All DBs
Position
10:1114283..1135925
Genome browser
AA seq
959 aa
AA seq
DB search
MAGDDLYLNNHHQLFDMPEAMWELPNYNNLPQSNALRTADGPFLQIMEQPKQRGFRFRYG
CEGPSHGGLPGATSEKNRKSFPAVKVCNYQGPARIVVQLVTANPSPAHLHAHSLVGKQCD
KGICIADLPPKDSTINFPNLGILHVTKKNVHKTLEERMTEALRMGYNNGVSIHPEIDIMQ
GEVRSPRELTEHQRSLISSAASHQSKDMDLSVVRLMFTAFLPNSDGGFSRRLDPVVSDPI
YDSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDILVRFYEEDETGMTWEAMGD
FSPTDVHRQFAIVFKTPKYRDLNLQKSTSVFVQLKRKSDNETSDPKPFTYYPLITDKEEV
QRKRQKTLPNFGDFNGAGGGGGGLGGGGGGGGHYRGVGGPSGGGGGYYQGFSSYDHGGGG
GGGGGGGGGGYSSGYSAALGSVPVKQEASQEAAAEDCSGSDGESEHQMGGDPGSGAAACP
PAEQRGPRFGETEDLCRPPPGSYAADRMEEAALVCEVDVSLLASASRQVQALYQYALTGD
PAYLLAPQRPLLTTQDQDGDTGLHLGVIHSQGEVVRSLAQVLSSLPGEDILNKRNHLYQT
PLHLAVITQQKEAIEALLLAGADATLTDRHGNTPLHLASQQGGGAMVATLLRHTEVAELV
DLSNLAGLCALHLAVLGNSLSAVRDLLGGGASVETAERSSGRTALHLATELDNVSLAGCL
LLEGNADVNACTYNGSTPLHVAVGRTSVKLTALLMAAGADPHKENFEPLYYRDEDCCEGE
EEEEEDEGYIPGTTPLSMAAAPQVLELLNGKEYRPEPVSRTPLTPQGDLSTLAVDTKRAL
CAALEGGAPGGAGGWERLAHTLGLGLLVNAFRLSPRPARTLLDSYEVSGGTIKDLAAALQ
LVENHVVLGLLQGALLELEASGEAAEEPAEDAQAPLADLKLETQNDSGVCDSGVELSTL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagacgacctctacctgaacaaccaccatcagcttttcgacatgcctgaagcc
atgtgggagcttcctaactacaacaacttgcctcaaagcaatgcgttgcggacggcagat
ggccccttcctccagatcatggaacagcccaagcagcgggggttcaggttccgctacggg
tgtgaggggccctcacatggagggctgccaggggccaccagtgagaagaacaggaagtcc
ttccccgccgtcaaggtgtgtaactaccaaggccccgcccgcatcgtggtacaactggtg
acggcgaaccctagcccggcccacctgcacgcccacagcctggtgggcaaacagtgtgac
aagggcatctgtatagcagacctcccccccaaagactctaccatcaacttccccaacctg
ggcatcctccatgtgaccaagaagaatgtgcacaagactcttgaggagcggatgacggag
gccctgaggatgggctacaacaacggcgtgtccatccaccccgagatcgacatcatgcag
ggggaggtgcgctccccccgggagctaacggagcaccagcgcagtctgatcagcagcgct
gcgtcccaccagtctaaggacatggacctcagcgtggtgcgcctcatgttcaccgccttc
ctccccaacagtgacggggggttctcccgccggctggaccccgtggtctcggaccccatc
tacgacagcaaggccccgaatgcgtccaacctgaagatcgtgcggatggaccggacggct
ggctgcgtgagcggcggggaggaggtgtacctgctctgtgacaaggtccagaaagatgac
atcctggtccggttctacgaagaggatgagaccgggatgacctgggaggcgatgggagat
ttttccccgacggatgttcacagacagtttgctatcgtgttcaaaacgccgaagtacaga
gacctgaatctccagaagtcaacctccgtcttcgtccagctcaagaggaagtcggacaac
gagaccagtgatcccaaacccttcacatactaccctctgatcacagacaaggaagaggtg
cagaggaagagacaaaagacgttgcccaacttcggggacttcaatggagcaggaggagga
ggaggggggctgggggggggagggggagggggcggccattaccggggggtgggcgggcct
tctggaggaggaggaggttactaccagggcttctcctcctacgaccacggaggaggagga
ggaggaggaggaggaggtggaggaggaggttacagcagcggttactctgctgccctgggc
tcagtgcccgtgaagcaagaagcgtcccaggaggcagcggcggaggactgtagcggcagt
gacggcgaatcggaacaccagatggggggggacccaggttccggggccgcggcctgcccc
ccagccgagcagaggggccctcggttcggggagacggaggacttgtgtcggccgccccct
ggatcgtacgccgcagacaggatggaggaagcagccctagtgtgtgaggtggatgtgtct
ctattggcctcagcgagccgtcaggtgcaggctctgtaccagtacgctctaactggggac
ccggcatacctgttggcccctcaaagacctctactgaccacccaggaccaggacggagac
acgggtcttcacctgggggtgatccacagccagggggaggtggtgagaagtctggcccag
gttctgtcctccctgcctggggaggacatcctcaacaagaggaaccacctttaccagact
cctctgcacctggccgtcatcacccagcagaaggaggccatcgaggccctgctgttggcc
ggcgccgacgccactctgacggatcgccacggcaacacgcccctgcacctggcgtcgcag
caagggggcggggccatggtggccactctgctcagacacaccgaggtggccgagctggtg
gacctgtccaacctggcaggcctgtgcgccctccacctggcggtgttgggcaacagccta
tcagcggtcagggatctgctggggggcggggctagcgtggaaacggccgagaggagctcc
gggaggacggccctccacctcgccaccgagctggacaacgtgtccctggccggctgcctg
ctgctggagggcaacgcagacgtcaacgcctgcacctacaacggctccacccctctgcac
gtagcggtgggacgcacctccgtcaaactgaccgccctcctcatggccgcaggtgcggac
cctcacaaggagaactttgagcctctgtactaccgggacgaagactgctgtgagggtgag
gaagaggaggaggaggacgaaggctacatcccagggaccaccccgctcagcatggccgcc
gcgccgcaggtactagagctgctgaatggtaaggagtaccggccggaaccagtcagccgg
acccctctgaccccacaaggggacctgtctaccctggccgtggacactaagcgcgcgctg
tgcgctgcactggaggggggggctcccgggggcgccggcggctgggagaggctggcccac
accctgggactgggcctgctggtcaacgccttcaggctcagcccccgtcccgcacgcacc
ctgctggacagctacgaggtctcgggtgggacgatcaaggacctggcggcagcgctgcaa
ttggttgaaaaccacgttgtgctgggcctcctgcagggggcgctgttggagctggaggct
tccggagaggctgccgaagagccagccgaagacgctcaggcccccctcgccgatctcaag
ctagaaactcagaacgacagcggggtgtgcgacagtggggtcgagctctccacgctctga
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