Gadus morhua (Atlantic cod): 115551912
Help
Entry
115551912 CDS
T10832
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04210
Apoptosis
gmh04218
Cellular senescence
gmh04620
Toll-like receptor signaling pathway
gmh04621
NOD-like receptor signaling pathway
gmh04622
RIG-I-like receptor signaling pathway
gmh04623
Cytosolic DNA-sensing pathway
gmh04625
C-type lectin receptor signaling pathway
gmh04920
Adipocytokine signaling pathway
gmh05132
Salmonella infection
gmh05168
Herpes simplex virus 1 infection
Brite
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
115551912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115551912
NCBI-ProteinID:
XP_030223381
Ensembl:
ENSGMOG00000007506
LinkDB
All DBs
Position
10:1114283..1135925
Genome browser
AA seq
959 aa
AA seq
DB search
MAGDDLYLNNHHQLFDMPEAMWELPNYNNLPQSNALRTADGPFLQIMEQPKQRGFRFRYG
CEGPSHGGLPGATSEKNRKSFPAVKVCNYQGPARIVVQLVTANPSPAHLHAHSLVGKQCD
KGICIADLPPKDSTINFPNLGILHVTKKNVHKTLEERMTEALRMGYNNGVSIHPEIDIMQ
GEVRSPRELTEHQRSLISSAASHQSKDMDLSVVRLMFTAFLPNSDGGFSRRLDPVVSDPI
YDSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDILVRFYEEDETGMTWEAMGD
FSPTDVHRQFAIVFKTPKYRDLNLQKSTSVFVQLKRKSDNETSDPKPFTYYPLITDKEEV
QRKRQKTLPNFGDFNGAGGGGGGLGGGGGGGGHYRGVGGPSGGGGGYYQGFSSYDHGGGG
GGGGGGGGGGYSSGYSAALGSVPVKQEASQEAAAEDCSGSDGESEHQMGGDPGSGAAACP
PAEQRGPRFGETEDLCRPPPGSYAADRMEEAALVCEVDVSLLASASRQVQALYQYALTGD
PAYLLAPQRPLLTTQDQDGDTGLHLGVIHSQGEVVRSLAQVLSSLPGEDILNKRNHLYQT
PLHLAVITQQKEAIEALLLAGADATLTDRHGNTPLHLASQQGGGAMVATLLRHTEVAELV
DLSNLAGLCALHLAVLGNSLSAVRDLLGGGASVETAERSSGRTALHLATELDNVSLAGCL
LLEGNADVNACTYNGSTPLHVAVGRTSVKLTALLMAAGADPHKENFEPLYYRDEDCCEGE
EEEEEDEGYIPGTTPLSMAAAPQVLELLNGKEYRPEPVSRTPLTPQGDLSTLAVDTKRAL
CAALEGGAPGGAGGWERLAHTLGLGLLVNAFRLSPRPARTLLDSYEVSGGTIKDLAAALQ
LVENHVVLGLLQGALLELEASGEAAEEPAEDAQAPLADLKLETQNDSGVCDSGVELSTL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagacgacctctacctgaacaaccaccatcagcttttcgacatgcctgaagcc
atgtgggagcttcctaactacaacaacttgcctcaaagcaatgcgttgcggacggcagat
ggccccttcctccagatcatggaacagcccaagcagcgggggttcaggttccgctacggg
tgtgaggggccctcacatggagggctgccaggggccaccagtgagaagaacaggaagtcc
ttccccgccgtcaaggtgtgtaactaccaaggccccgcccgcatcgtggtacaactggtg
acggcgaaccctagcccggcccacctgcacgcccacagcctggtgggcaaacagtgtgac
aagggcatctgtatagcagacctcccccccaaagactctaccatcaacttccccaacctg
ggcatcctccatgtgaccaagaagaatgtgcacaagactcttgaggagcggatgacggag
gccctgaggatgggctacaacaacggcgtgtccatccaccccgagatcgacatcatgcag
ggggaggtgcgctccccccgggagctaacggagcaccagcgcagtctgatcagcagcgct
gcgtcccaccagtctaaggacatggacctcagcgtggtgcgcctcatgttcaccgccttc
ctccccaacagtgacggggggttctcccgccggctggaccccgtggtctcggaccccatc
tacgacagcaaggccccgaatgcgtccaacctgaagatcgtgcggatggaccggacggct
ggctgcgtgagcggcggggaggaggtgtacctgctctgtgacaaggtccagaaagatgac
atcctggtccggttctacgaagaggatgagaccgggatgacctgggaggcgatgggagat
ttttccccgacggatgttcacagacagtttgctatcgtgttcaaaacgccgaagtacaga
gacctgaatctccagaagtcaacctccgtcttcgtccagctcaagaggaagtcggacaac
gagaccagtgatcccaaacccttcacatactaccctctgatcacagacaaggaagaggtg
cagaggaagagacaaaagacgttgcccaacttcggggacttcaatggagcaggaggagga
ggaggggggctgggggggggagggggagggggcggccattaccggggggtgggcgggcct
tctggaggaggaggaggttactaccagggcttctcctcctacgaccacggaggaggagga
ggaggaggaggaggaggtggaggaggaggttacagcagcggttactctgctgccctgggc
tcagtgcccgtgaagcaagaagcgtcccaggaggcagcggcggaggactgtagcggcagt
gacggcgaatcggaacaccagatggggggggacccaggttccggggccgcggcctgcccc
ccagccgagcagaggggccctcggttcggggagacggaggacttgtgtcggccgccccct
ggatcgtacgccgcagacaggatggaggaagcagccctagtgtgtgaggtggatgtgtct
ctattggcctcagcgagccgtcaggtgcaggctctgtaccagtacgctctaactggggac
ccggcatacctgttggcccctcaaagacctctactgaccacccaggaccaggacggagac
acgggtcttcacctgggggtgatccacagccagggggaggtggtgagaagtctggcccag
gttctgtcctccctgcctggggaggacatcctcaacaagaggaaccacctttaccagact
cctctgcacctggccgtcatcacccagcagaaggaggccatcgaggccctgctgttggcc
ggcgccgacgccactctgacggatcgccacggcaacacgcccctgcacctggcgtcgcag
caagggggcggggccatggtggccactctgctcagacacaccgaggtggccgagctggtg
gacctgtccaacctggcaggcctgtgcgccctccacctggcggtgttgggcaacagccta
tcagcggtcagggatctgctggggggcggggctagcgtggaaacggccgagaggagctcc
gggaggacggccctccacctcgccaccgagctggacaacgtgtccctggccggctgcctg
ctgctggagggcaacgcagacgtcaacgcctgcacctacaacggctccacccctctgcac
gtagcggtgggacgcacctccgtcaaactgaccgccctcctcatggccgcaggtgcggac
cctcacaaggagaactttgagcctctgtactaccgggacgaagactgctgtgagggtgag
gaagaggaggaggaggacgaaggctacatcccagggaccaccccgctcagcatggccgcc
gcgccgcaggtactagagctgctgaatggtaaggagtaccggccggaaccagtcagccgg
acccctctgaccccacaaggggacctgtctaccctggccgtggacactaagcgcgcgctg
tgcgctgcactggaggggggggctcccgggggcgccggcggctgggagaggctggcccac
accctgggactgggcctgctggtcaacgccttcaggctcagcccccgtcccgcacgcacc
ctgctggacagctacgaggtctcgggtgggacgatcaaggacctggcggcagcgctgcaa
ttggttgaaaaccacgttgtgctgggcctcctgcagggggcgctgttggagctggaggct
tccggagaggctgccgaagagccagccgaagacgctcaggcccccctcgccgatctcaag
ctagaaactcagaacgacagcggggtgtgcgacagtggggtcgagctctccacgctctga
DBGET
integrated database retrieval system
