Gadus morhua (Atlantic cod): 115551996
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Entry
115551996 CDS
T10832
Symbol
nkx1-1
Name
(RefSeq) LOW QUALITY PROTEIN: NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115551996 (nkx1-1)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
115551996 (nkx1-1)
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Paralog
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115551996
NCBI-ProteinID:
XP_030223530
Ensembl:
ENSGMOG00000030470
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Position
10:<9492476..9496940
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AA seq
407 aa
AA seq
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AGTDWEWEQGKRPNTRRLGLSGVRRAKTHWTARVPWINELSVPLLSETPSPQRATPSPPG
ADRTGPTPPRGRPDRVGADGALPAPQQASIGPTGPAGHRTTSFSVLDILDPNKFTSNRRP
ASHRLDAEFGAEKRRRGAGGESEEQQPASDRKSRAEEYDPIVGRKPAAGIHKEAYVYRGP
DENEFQHRAPTPDSEAPDEPYSSEESNSAPPSGGEEAGLHHMDPARDTKSPGGGPGPGPG
SQQGKPKRKRSGSDSKSGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLT
ETQVKIWFQNRRTKWKKQNPGADTSAPTSGGGGGGXGGMGGLSPLSQSPPMGGHLSMHGG
GYGGHHHGPAGGLVQLPFLTSSHAAVLSPFMLGSQTYGAPTFYTTHL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gccgggacagactgggaatgggaacaggggaagcggcccaacacacggcgactgggactg
tcgggagtccggagagcgaagacacattggacggctcgagtgccatggataaacgagctt
tctgtccccctgctgtcagagaccccaagcccgcagagagccacgccgagtccccccggg
gcagaccggaccgggccgacccccccccggggccgaccggatcgggtcggagcggacggc
gcgttgcccgccccccagcaggcgtcaataggccccaccggaccagcgggtcacagaacc
acttcgttctcggttctggatattctggatcccaacaaattcaccagtaaccggagaccc
gcgagccaccgtctggacgcggagttcggcgccgagaagcggaggaggggagcgggagga
gagagcgaggagcagcagcccgcctcagaccgcaagagccgcgcggaggagtacgacccc
atcgtgggcaggaagcccgcggccgggatccacaaggaggcctacgtgtacaggggcccc
gatgagaacgagttccagcaccgagcccccactccggactcagaggcccctgacgagcct
tacagcagcgaggagagcaactcggccccgcccagcgggggggaggaggccggcctccac
cacatggacccggcccgcgacaccaagagccccgggggggggccaggcccggggcctggc
tcgcagcaggggaagcccaagaggaagcgctccggctccgactccaagtcggggaagccg
cggcgggcgcgaacggccttcacctacgagcagctggtggcgctggagaacaagttcaag
tcgacgcggtacctatcggtgtgcgagcggctgaacctcgccctgtcgctgtcgctcacc
gagacgcaggtcaagatctggttccagaaccgccggaccaagtggaagaagcagaacccc
ggggcggacaccagcgcccccacctcggggggcggggggggcgggnnggggggcatgggg
ggcctcagccctctgagccagtctccccccatggggggccacctgtccatgcacgggggg
ggctatggtgggcaccaccatggccccgcgggggggctggtgcagctgcccttcctgacc
tccagccacgccgctgtgctctcgcccttcatgctgggctcccagacctacggggccccc
accttctacaccacacacctgtag
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